UHGV-0738701 (vOTU-154504)

Viral Genome: UHGV-0738701

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0738701
vOTU ID	vOTU-154504
Representative Genome?	Yes
Source	HuVirDB
Original Genome ID	ERS743416\|NODE_50_length_15824_cov_73.876784
Associated Biosample	SAMEA3444284
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	82.58 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	8
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9737
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	29.71
Jumbo Phage?	No

Genome Content
Length (bps)	15,824
GC Content	38.13%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	23
CDS Density	94%
Average CDS Length (bps)	648.78
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0738701_3	K07273	134.7	8.60001e-40	acm; lysozyme	N/A
PHROG	UHGV-0738701_3	phrog_291	118.6	7.2e-35	endolysin	lysis
UniRef90	UHGV-0738701_3	UniRef90_R5MT05	271.0	0	Glycosyl hydrolase family 25/peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-0738701_3	1304880.JAGB01000002_gene2202	112.0	1.66e-26	Glycosyl hydrolase, family 25	N/A
Pfam	UHGV-0738701_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0738701_3	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0738701_3	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0738701_4	phrog_1863	63.6	2e-18	N/A	unknown function
PHROG	UHGV-0738701_5	phrog_1129	59.6	4.2e-17	holin	lysis
eggNOG-mapper	UHGV-0738701_5	411473.RUMCAL_01944	49.3	0.00000151	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0738701_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0738701_5	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0738701_6	phrog_11037	139.7	2.09999e-41	N/A	unknown function
UniRef90	UHGV-0738701_6	UniRef90_R5N5I4	451.0	0	Morphogenesis protein	N/A
eggNOG-mapper	UHGV-0738701_6	10753.B7SSN4_BPNF	162.0	4.2039e-45	N/A	N/A
Pfam	UHGV-0738701_6	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
structural_annotation	UHGV-0738701_6	PF18013	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0738701_7	PF01105,NF038127,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-0738701_10	phrog_3225	159.3	0	adaptor Ad4	connector
UniRef90	UHGV-0738701_10	UniRef90_R5N6P4	387.0	0	Lower collar	N/A
PHROG	UHGV-0738701_11	phrog_2038	247.2	0	upper collar connector	connector
UniRef90	UHGV-0738701_11	UniRef90_R5N5I0	600.0	0	Connector protein	N/A
eggNOG-mapper	UHGV-0738701_11	10753.B7SSN1_BPNF	119.0	2.41e-28	Phage Connector (GP10)	N/A
Pfam	UHGV-0738701_11	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-0738701_11	PF05352,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0738701_12	phrog_2248	433.9	0	tail protein	tail
UniRef90	UHGV-0738701_12	UniRef90_R5MM56	1049.0	0	Tail protein	N/A
eggNOG-mapper	UHGV-0738701_12	10756.DIT9_BPPH2	107.0	1.16e-21	N/A	N/A
Pfam	UHGV-0738701_12	PF16838	N/A	N/A	Caudoviral major tail protein N-terminus	Caud_tail_N
Pfam	UHGV-0738701_12	PF20934	N/A	N/A	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
structural_annotation	UHGV-0738701_12	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-0738701_13	phrog_2006	335.0	0	major head protein	head and packaging
UniRef90	UHGV-0738701_13	UniRef90_R5MSZ3	760.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-0738701_13	12345.CAPSD_BPGA1	151.0	3.24e-38	T=13 icosahedral viral capsid	N/A
structural_annotation	UHGV-0738701_13	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
UniRef90	UHGV-0738701_14	UniRef90_R5MMY2	107.0	5.09e-29	AXH domain-containing protein	N/A
PHROG	UHGV-0738701_15	phrog_2150	298.2	0	terminase	head and packaging
UniRef90	UHGV-0738701_15	UniRef90_R5N6N9	680.0	0	DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-0738701_15	10756.PKG16_BPPH2	103.0	2.7e-22	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-0738701_15	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-0738701_15	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-0738701_16	PF17427	N/A	N/A	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
structural_annotation	UHGV-0738701_16	PF17427	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0738701_17	PF17548,MF_00273	N/A	N/A	N/A	N/A
KOfam	UHGV-0738701_18	K21237	448.4	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0738701_18	phrog_1907	499.9	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0738701_18	UniRef90_R5N5H3	1199.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0738701_18	10756.DPOL_BPPH2	323.0	0	DNA polymerase type B, organellar and viral	N/A
Pfam	UHGV-0738701_18	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-0738701_18	PF03175,MF_04055,NF004415,COG0417	N/A	N/A	N/A	N/A