UHGV-1309992 (vOTU-136603)

Viral Genome: UHGV-1309992

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1309992
vOTU ID	vOTU-136603
Representative Genome?	Yes
Source	HuVirDB
Original Genome ID	SRS962659\|NODE_1_length_15935_cov_3424.486902
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	HMM-based
CheckV Completeness	53.04 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	5
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9806
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	14.95
Jumbo Phage?	No

Genome Content
Length (bps)	15,935
GC Content	48.51%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	18
CDS Density	93%
Average CDS Length (bps)	827.00
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1309992_3	K07273	149.2	3.64338e-44	acm; lysozyme	N/A
PHROG	UHGV-1309992_3	phrog_291	157.4	0	endolysin	lysis
UniRef90	UHGV-1309992_3	UniRef90_UPI00195EE7EA	404.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1309992_3	78345.BMERY_0862	314.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1309992_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1309992_3	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1309992_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1309992_3	PF01183,NF003645,COG3757	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1309992_4	PF17548	N/A	N/A	N/A	N/A
Pfam	UHGV-1309992_5	PF17427	N/A	N/A	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
structural_annotation	UHGV-1309992_5	PF17427	N/A	N/A	N/A	N/A
PHROG	UHGV-1309992_7	phrog_1907	70.2	3.7e-26	DNA polymerase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1309992_7	PF03175,MF_04055,NF004419,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1309992_8	phrog_2150	154.6	0	terminase	head and packaging
UniRef90	UHGV-1309992_8	UniRef90_A0A843HJW2	138.0	2.64e-34	Phage DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-1309992_8	10756.PKG16_BPPH2	126.0	1.25e-30	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-1309992_8	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-1309992_8	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1309992_10	phrog_2006	223.1	0	major head protein	head and packaging
UniRef90	UHGV-1309992_10	UniRef90_A0A3G3LXZ7	202.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1309992_10	338473.A6XAD5_9CAUD	187.0	0	viral capsid	N/A
structural_annotation	UHGV-1309992_10	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1309992_11	phrog_2248	59.8	1.9e-26	tail protein	tail
eggNOG-mapper	UHGV-1309992_11	338473.A6XAD6_9CAUD	76.3	0.0000000000284	N/A	N/A
structural_annotation	UHGV-1309992_11	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-1309992_12	phrog_2038	133.9	1.3e-39	upper collar connector	connector
UniRef90	UHGV-1309992_12	UniRef90_A0A345BNP3	103.0	8.43e-22	Upper collar protein	N/A
eggNOG-mapper	UHGV-1309992_12	10756.PORTL_BPPH2	87.4	7.13e-17	Phage Connector (GP10)	N/A
Pfam	UHGV-1309992_12	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-1309992_12	PF05352,TIGR01538,COG4695	N/A	N/A	N/A	N/A
UniRef90	UHGV-1309992_17	UniRef90_UPI00123255FA	103.0	9.08e-21	SGNH/GDSL hydrolase family protein	N/A
structural_annotation	UHGV-1309992_17	PF14606,NF007819,COG2240	N/A	N/A	N/A	N/A