UHGV-1317866 (vOTU-033513)

Viral Genome: UHGV-1317866

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1317866
vOTU ID	vOTU-033513
Representative Genome?	Yes
Source	GVD
Original Genome ID	Han_2018_ERR1398261_NODE_575_length_23192_cov_4.213770
Associated Biosample	SAMEA3951787
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	61.71 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9803
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	42.77
Jumbo Phage?	No

Genome Content
Length (bps)	23,192
GC Content	41.82%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	28
CDS Density	95%
Average CDS Length (bps)	787.61
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1317866_1	K06400	270.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1317866_1	phrog_95	289.8	0	integrase	integration and excision
UniRef90	UHGV-1317866_1	UniRef90_A6BEV3	763.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1317866_1	411462.DORLON_00823	763.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1317866_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1317866_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1317866_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1317866_1	PF07508,PF14282,NF041201	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1317866_2	1123288.SOV_6c00720	63.5	0.00000000000145	N/A	N/A
PHROG	UHGV-1317866_3	phrog_1914	61.5	1.5e-17	N/A	unknown function
UniRef90	UHGV-1317866_3	UniRef90_UPI001E0FC8E6	291.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1317866_3	1235802.C823_05682	174.0	0	N/A	N/A
Pfam	UHGV-1317866_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1317866_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1317866_3	PF06114,MF_00745,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1317866_4	K22299	46.4	0.00000000000091	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-1317866_4	UniRef90_UPI001D81BEC2	185.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-1317866_4	997296.PB1_16114	85.9	4.75e-20	Protein conserved in bacteria	N/A
COG	UHGV-1317866_4	COG1426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1317866_4	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1317866_5	K01447	98.7	9.3e-29	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1317866_5	phrog_1493	198.0	0	endolysin	lysis
UniRef90	UHGV-1317866_5	UniRef90_UPI001D016E56	481.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1317866_5	1280698.AUJS01000007_gene1059	478.0	0	Ami_2	N/A
Pfam	UHGV-1317866_5	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1317866_5	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1317866_5	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1317866_5	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_6	phrog_199	97.5	1.4e-28	holin	lysis
UniRef90	UHGV-1317866_6	UniRef90_A0A173VKF9	257.0	0	Holin	N/A
eggNOG-mapper	UHGV-1317866_6	1232453.BAIF02000059_gene1615	216.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1317866_6	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1317866_6	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1317866_6	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1317866_6	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1317866_7	K20846	73.2	2.5e-21	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-1317866_7	phrog_215	100.2	2.2e-29	structural protein with Ig domain	head and packaging
UniRef90	UHGV-1317866_7	UniRef90_UPI00156E217C	947.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1317866_7	411462.DORLON_00771	277.0	0	N/A	N/A
Pfam	UHGV-1317866_7	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
Pfam	UHGV-1317866_7	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
structural_annotation	UHGV-1317866_7	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_8	phrog_19695	107.4	1.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-1317866_8	411462.DORLON_00772	172.0	0	N/A	N/A
structural_annotation	UHGV-1317866_8	PF19714	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_9	phrog_25635	243.5	0	N/A	unknown function
UniRef90	UHGV-1317866_9	UniRef90_A0A6L8RVX5	499.0	0	H_lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-1317866_9	411462.DORLON_00774	308.0	0	N/A	N/A
Pfam	UHGV-1317866_9	PF09458	N/A	N/A	H-type lectin domain	H_lectin
structural_annotation	UHGV-1317866_9	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_10	phrog_538	214.6	0	minor tail protein	tail
UniRef90	UHGV-1317866_10	UniRef90_UPI001F3E20C1	301.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1317866_10	411462.DORLON_00775	615.0	0	N/A	N/A
Pfam	UHGV-1317866_10	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1317866_10	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1317866_11	411462.DORLON_00776	477.0	0	N/A	N/A
structural_annotation	UHGV-1317866_11	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_12	phrog_6900	246.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1317866_12	UniRef90_A0A174JJE7	1164.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1317866_12	742765.HMPREF9457_02136	760.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1317866_12	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1317866_12	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_13	phrog_706	177.4	0	N/A	unknown function
UniRef90	UHGV-1317866_13	UniRef90_A6BEQ8	374.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1317866_13	411462.DORLON_00779	374.0	0	COG NOG24969 non supervised orthologous group	N/A
Pfam	UHGV-1317866_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1317866_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_14	phrog_4450	126.1	1.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-1317866_14	411462.DORLON_00780	276.0	0	N/A	N/A
Pfam	UHGV-1317866_14	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-1317866_14	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_15	phrog_3099	169.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1317866_15	411462.DORLON_00781	324.0	0	N/A	N/A
structural_annotation	UHGV-1317866_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_16	phrog_3266	141.7	2.49992e-42	tail completion	connector
eggNOG-mapper	UHGV-1317866_16	742765.HMPREF9457_02131	253.0	0	N/A	N/A
structural_annotation	UHGV-1317866_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_17	phrog_556	152.7	1.4013e-45	minor head protein	head and packaging
UniRef90	UHGV-1317866_17	UniRef90_UPI00093128B4	191.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1317866_17	411462.DORLON_00783	256.0	0	N/A	N/A
structural_annotation	UHGV-1317866_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_18	phrog_3366	151.3	2.8026e-45	N/A	unknown function
eggNOG-mapper	UHGV-1317866_18	411462.DORLON_00784	271.0	0	N/A	N/A
Pfam	UHGV-1317866_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1317866_18	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_19	phrog_541	96.7	2e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1317866_19	411462.DORLON_00785	246.0	0	N/A	N/A
PHROG	UHGV-1317866_20	phrog_10	173.6	0	major head protein	head and packaging
UniRef90	UHGV-1317866_20	UniRef90_A0A391PHY8	616.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1317866_20	411461.DORFOR_00744	599.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-1317866_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1317866_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1317866_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1317866_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_21	phrog_2303	158.9	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1317866_21	411462.DORLON_00787	317.0	0	N/A	N/A
AcrCatalog	UHGV-1317866_21	cluster_74817	70.9	2.16e-17	NA	N/A
structural_annotation	UHGV-1317866_21	PF10788,MF_02110	N/A	N/A	N/A	N/A
KOfam	UHGV-1317866_22	K07584	48.2	0.00000000000022	N/A	N/A
PHROG	UHGV-1317866_22	phrog_4478	88.0	7.3e-26	peptidase	other
UniRef90	UHGV-1317866_22	UniRef90_A0A173TUJ7	153.0	0	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-1317866_22	411462.DORLON_00788	194.0	0	Pfam:Peptidase_C108	N/A
Pfam	UHGV-1317866_22	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1317866_22	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1317866_22	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_23	phrog_3711	95.4	3.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1317866_23	411462.DORLON_00789	177.0	0	N/A	N/A
PHROG	UHGV-1317866_24	phrog_21033	358.5	0	N/A	unknown function
UniRef90	UHGV-1317866_24	UniRef90_A0A173VG74	1093.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1317866_24	742765.HMPREF9457_02121	772.0	0	N/A	N/A
Pfam	UHGV-1317866_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1317866_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1317866_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_25	phrog_533	423.8	0	portal protein	head and packaging
UniRef90	UHGV-1317866_25	UniRef90_A6BES5	919.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1317866_25	411462.DORLON_00795	919.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-1317866_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1317866_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1317866_26	K06909	212.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1317866_26	phrog_2	115.3	8.6e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1317866_26	UniRef90_B0G3C9	887.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1317866_26	411461.DORFOR_00750	887.0	0	COG COG1783 Phage terminase large subunit	N/A
Pfam	UHGV-1317866_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1317866_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1317866_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1317866_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1317866_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1317866_27	phrog_509	278.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-1317866_27	UniRef90_A0A391P905	347.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1317866_27	411461.DORFOR_00751	392.0	0	DNA packaging	N/A
Pfam	UHGV-1317866_27	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
NCBIFam	UHGV-1317866_27	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-1317866_27	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1317866_27	NF040601,COG5484	N/A	N/A	N/A	N/A
UniRef90	UHGV-1317866_28	UniRef90_A0A3A9APU0	158.0	1.26117e-44	N/A	N/A
eggNOG-mapper	UHGV-1317866_28	931626.Awo_c26000	158.0	4.2039e-45	N/A	N/A
Pfam	UHGV-1317866_28	PF14213	N/A	N/A	N/A	DUF4325
COG	UHGV-1317866_28	COG4585	N/A	N/A	Signal transduction histidine kinase ComP	N/A