UHGV-1343343 (vOTU-148168)

Viral Genome: UHGV-1343343

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1343343
vOTU ID	vOTU-148168
Representative Genome?	Yes
Source	GVD
Original Genome ID	Norman_24_NODE_25_length_32122_cov_116.311629
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	86.04 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	24
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9775
Viral Hallmark Genes (geNomad)	12
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	41.27
Jumbo Phage?	No

Genome Content
Length (bps)	32,122
GC Content	50.67%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	54
CDS Density	88%
Average CDS Length (bps)	525.44
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1343343_1	UniRef90_UPI000B1A95DC	201.0	0	M23 family metallopeptidase	N/A
eggNOG-mapper	UHGV-1343343_1	665956.HMPREF1032_01628	228.0	0	N/A	N/A
PHROG	UHGV-1343343_2	phrog_4105	94.3	8.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1343343_2	657322.FPR_27220	113.0	2.34e-31	N/A	N/A
PHROG	UHGV-1343343_3	phrog_1129	69.6	3.2e-20	holin	lysis
UniRef90	UHGV-1343343_3	UniRef90_A0A0D8J2M2	176.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1343343_3	665956.HMPREF1032_03272	158.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1343343_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1343343_3	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1343343_4	K22299	44.2	0.0000000000037	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-1343343_4	UniRef90_A0A1C6CJS4	99.8	9.41e-25	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-1343343_4	877418.ATWV01000006_gene2261	82.8	7.15e-19	helix-turn-helix domain protein	N/A
Pfam	UHGV-1343343_4	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1343343_4	COG1426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1343343_4	PF13560,MF_00535,NF041951,COG1513	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_5	phrog_1914	68.0	1.1e-19	N/A	unknown function
UniRef90	UHGV-1343343_5	UniRef90_A0A3P3QUA4	149.0	1.12945e-42	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1343343_5	1235802.C823_05682	126.0	8.42e-35	N/A	N/A
Pfam	UHGV-1343343_5	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1343343_5	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1343343_5	PF06114,MF_00745,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1343343_7	K14059	208.1	0	int; integrase	N/A
PHROG	UHGV-1343343_7	phrog_1	200.9	0	integrase	integration and excision
UniRef90	UHGV-1343343_7	UniRef90_A0A6I3Q9M1	743.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1343343_7	1507.HMPREF0262_00307	251.0	0	Phage integrase family	N/A
Pfam	UHGV-1343343_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1343343_7	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1343343_7	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_8	phrog_22683	164.4	0	N/A	unknown function
UniRef90	UHGV-1343343_8	UniRef90_A0A425VTL3	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-1343343_8	663952.SDD27957_07470	146.0	8.40779e-45	N/A	N/A
AcrCatalog	UHGV-1343343_8	cluster_3962	139.0	0	NA	N/A
Pfam	UHGV-1343343_8	PF13783	N/A	N/A	N/A	DUF4177
structural_annotation	UHGV-1343343_8	PF13783,NF008362,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_10	phrog_87	66.4	3.2e-19	metallo-protease	other
UniRef90	UHGV-1343343_10	UniRef90_UPI001966F635	166.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1343343_10	1297617.JPJD01000059_gene2645	74.7	0.00000000000000559	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1343343_10	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1343343_10	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1343343_10	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-1343343_11	UniRef90_UPI001966F1BB	177.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1343343_11	411460.RUMTOR_02056	88.2	2.59e-20	Bacteriophage CI repressor helix-turn-helix domain	N/A
COG	UHGV-1343343_11	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1343343_11	PF12844,MF_00584,NF041951,COG1476	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1343343_13	cluster_35670	125.0	1.43997e-41	NA	N/A
structural_annotation	UHGV-1343343_13	PF11998	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_16	phrog_862	73.8	2.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-1343343_16	926549.KI421517_gene2362	109.0	1.3e-26	N/A	N/A
structural_annotation	UHGV-1343343_16	PF05037,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_17	phrog_398	198.2	0	N/A	unknown function
UniRef90	UHGV-1343343_17	UniRef90_UPI00196739CB	252.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-1343343_17	585503.HMPREF7545_1716	170.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-1343343_17	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1343343_17	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_18	phrog_15768	86.5	3.3e-25	N/A	unknown function
UniRef90	UHGV-1343343_18	UniRef90_UPI0018988BDC	82.4	0.00000000000000224	N/A	N/A
eggNOG-mapper	UHGV-1343343_18	929704.Myrod_0677	86.3	2.31e-17	N/A	N/A
structural_annotation	UHGV-1343343_18	PF09681,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-1343343_19	K02314	216.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1343343_19	phrog_19	230.4	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1343343_19	UniRef90_A0A316NVS3	781.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1343343_19	1203606.HMPREF1526_01325	169.0	4.2039e-45	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1343343_19	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1343343_19	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1343343_19	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1343343_19	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_20	phrog_244	78.7	9.3e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1343343_20	33035.JPJF01000122_gene2460	175.0	0	N/A	N/A
structural_annotation	UHGV-1343343_20	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1343343_22	K00571	108.9	5.7e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1343343_22	phrog_67	99.7	1.4e-30	DNA methyltransferase	other
UniRef90	UHGV-1343343_22	UniRef90_A0A3A6E967	530.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1343343_22	910314.HMPREF9220_0636	375.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1343343_22	MTase_II_00157	82.7	2.1e-25	Type II methyltransferase	RM
Pfam	UHGV-1343343_22	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1343343_22	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1343343_22	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_23	phrog_599	47.6	0.00000000000022	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-1343343_23	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1343343_23	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_25	phrog_757	247.7	0	DNA methyltransferase	other
UniRef90	UHGV-1343343_25	UniRef90_A0A372V4B7	403.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1343343_25	485918.Cpin_3834	272.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1343343_25	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1343343_25	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_27	phrog_38832	57.9	4.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-1343343_27	665956.HMPREF1032_00143	85.9	4.28e-19	N/A	N/A
structural_annotation	UHGV-1343343_27	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_28	phrog_1934	133.9	5.8e-40	N/A	unknown function
UniRef90	UHGV-1343343_28	UniRef90_UPI0018AC0226	252.0	0	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-1343343_28	397290.C810_01488	164.0	0	zinc-finger-containing domain	N/A
Pfam	UHGV-1343343_28	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-1343343_28	PF11672	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_30	phrog_21034	49.2	0.000000000000089	N/A	unknown function
eggNOG-mapper	UHGV-1343343_30	379066.GAU_1809	58.2	0.000000000353	N/A	N/A
PHROG	UHGV-1343343_31	phrog_2245	88.9	5.5e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1343343_31	UniRef90_A0A4U9RLZ8	75.5	6.65e-16	N/A	N/A
eggNOG-mapper	UHGV-1343343_31	1519439.JPJG01000059_gene1914	68.2	0.000000000000178	N/A	N/A
PHROG	UHGV-1343343_32	phrog_478	137.1	5.70006e-41	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1343343_32	UniRef90_A0A0U2WUA4	164.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1343343_32	665956.HMPREF1032_03082	224.0	0	N/A	N/A
UniRef90	UHGV-1343343_34	UniRef90_UPI0019673783	67.0	0.00000000000257	helix-turn-helix domain-containing protein	N/A
PHROG	UHGV-1343343_35	phrog_36	58.0	1.8e-16	transcriptional regulator	transcription regulation
structural_annotation	UHGV-1343343_35	PF07374,TIGR01637	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_36	phrog_9	170.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1343343_36	UniRef90_UPI001F1A3C47	643.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1343343_36	748224.HMPREF9436_01467	748.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1343343_36	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1343343_36	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1343343_36	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_37	phrog_104	202.7	0	portal protein	head and packaging
UniRef90	UHGV-1343343_37	UniRef90_A0A316PMS0	738.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1343343_37	748224.HMPREF9436_01468	726.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1343343_37	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_38	phrog_193	120.3	1.8e-35	head maturation protease	head and packaging
UniRef90	UHGV-1343343_38	UniRef90_A0A6N8H118	328.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1343343_38	748224.HMPREF9436_01469	307.0	0	N/A	N/A
COG	UHGV-1343343_38	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
structural_annotation	UHGV-1343343_39	PF21279,NF040942	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_40	phrog_194	64.4	1.1e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-1343343_40	UniRef90_UPI00195B7610	149.0	1.76003e-42	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1343343_40	663278.Ethha_0497	158.0	0	N/A	N/A
Pfam	UHGV-1343343_40	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1343343_40	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_41	phrog_10	137.8	9.40005e-41	major head protein	head and packaging
UniRef90	UHGV-1343343_41	UniRef90_A0A1Y4TJU9	485.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1343343_41	748224.HMPREF9436_00690	430.0	0	Phage capsid family	N/A
Pfam	UHGV-1343343_41	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1343343_41	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1343343_41	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1343343_41	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_43	phrog_137	61.3	1.3e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-1343343_43	UniRef90_E2ZGA8	155.0	0	Phage protein Gp19/Gp15/Gp42	N/A
structural_annotation	UHGV-1343343_43	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_44	phrog_501	84.6	9.7e-25	head closure Hc1	connector
eggNOG-mapper	UHGV-1343343_44	748224.HMPREF9436_00693	154.0	0	N/A	N/A
structural_annotation	UHGV-1343343_44	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_45	phrog_387	65.2	8.1e-19	neck protein	connector
eggNOG-mapper	UHGV-1343343_45	748224.HMPREF9436_00694	82.4	1.55e-19	N/A	N/A
PHROG	UHGV-1343343_46	phrog_123	62.7	6.2e-18	tail terminator	connector
eggNOG-mapper	UHGV-1343343_46	663952.SDD27957_07240	119.0	2.85e-33	N/A	N/A
structural_annotation	UHGV-1343343_46	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_47	phrog_117	166.5	0	major tail protein	tail
UniRef90	UHGV-1343343_47	UniRef90_A0A316PMT1	318.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1343343_47	1280698.AUJS01000007_gene1044	246.0	0	domain, Protein	N/A
COG	UHGV-1343343_47	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1343343_47	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_48	phrog_1526	77.0	2.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1343343_48	875454.BAEW01000017_gene1589	86.7	3.06e-21	N/A	N/A
PHROG	UHGV-1343343_49	phrog_1633	139.4	1.10002e-41	N/A	unknown function
UniRef90	UHGV-1343343_49	UniRef90_UPI001C392A95	115.0	5.45e-31	N/A	N/A
eggNOG-mapper	UHGV-1343343_49	665950.HMPREF1025_02523	107.0	3.07e-28	N/A	N/A
Pfam	UHGV-1343343_49	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1343343_49	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_50	phrog_6900	255.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1343343_50	UniRef90_A0A316Q0J4	442.0	0	PblA	N/A
eggNOG-mapper	UHGV-1343343_50	1280698.AUJS01000007_gene1047	462.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1343343_50	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1343343_50	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_51	phrog_33	64.4	2.5e-18	distal tail protein Dit	tail
UniRef90	UHGV-1343343_51	UniRef90_A0A3A6ECR2	538.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1343343_51	665956.HMPREF1032_02941	279.0	0	Phage tail protein	N/A
structural_annotation	UHGV-1343343_51	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_52	phrog_538	185.6	0	minor tail protein	tail
UniRef90	UHGV-1343343_52	UniRef90_UPI000C7C9115	545.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1343343_52	665956.HMPREF1032_02940	373.0	0	N/A	N/A
Pfam	UHGV-1343343_52	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1343343_52	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1343343_53	phrog_9534	177.7	0	head protein	head and packaging
UniRef90	UHGV-1343343_53	UniRef90_A0A1Y4GY33	95.5	6.11e-19	Collar domain-containing protein	N/A
eggNOG-mapper	UHGV-1343343_53	665956.HMPREF1032_02939	223.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1343343_53	PF21567	N/A	N/A	N/A	N/A