UHGV-1350696 (vOTU-001592)

Viral Genome: UHGV-1350696

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1350696
vOTU ID	vOTU-001592
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0276902
Associated Biosample	SAMEA4545305
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	21
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9749
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	99.4
Jumbo Phage?	No

Genome Content
Length (bps)	41,589
GC Content	41.04%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	48
CDS Density	92%
Average CDS Length (bps)	801.13
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1350696_1	K14059	248.1	0	int; integrase	N/A
PHROG	UHGV-1350696_1	phrog_1	224.0	0	integrase	integration and excision
UniRef90	UHGV-1350696_1	UniRef90_A0A1M6KED8	185.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1350696_1	910314.HMPREF9220_0756	175.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1350696_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1350696_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1350696_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1350696_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_3	phrog_5149	55.8	9.3e-16	N/A	unknown function
UniRef90	UHGV-1350696_3	UniRef90_A0A0Z8H732	51.6	0.000000805	ICESt1 ORFI	N/A
KOfam	UHGV-1350696_8	K21313	700.8	0	1; T7 RNA polymerase [EC:2.7.7.6]	N/A
PHROG	UHGV-1350696_8	phrog_414	800.7	0	RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350696_8	UniRef90_A0A1M6MEA8	805.0	0	DNA-directed RNA polymerase	N/A
eggNOG-mapper	UHGV-1350696_8	910314.HMPREF9220_0743	676.0	0	dna-directed rna polymerase	N/A
Pfam	UHGV-1350696_8	PF14700	N/A	N/A	DNA-directed RNA polymerase N-terminal	RPOL_N
Pfam	UHGV-1350696_8	PF00940	N/A	N/A	DNA-dependent RNA polymerase	RNA_pol
COG	UHGV-1350696_8	COG5108	N/A	N/A	Mitochondrial DNA-directed RNA polymerase	N/A
structural_annotation	UHGV-1350696_8	PF00940,PF14700,NF011539,COG5108	N/A	N/A	N/A	N/A
Pfam	UHGV-1350696_9	PF04221	N/A	N/A	RelB antitoxin	RelB
structural_annotation	UHGV-1350696_9	PF19839,NF010256,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_12	phrog_236	70.0	5.1e-20	nucleotide kinase	other
Pfam	UHGV-1350696_12	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1350696_12	PF11753,PF02427,MF_00613,NF002745	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_15	phrog_6721	137.0	9.00054e-42	N/A	unknown function
eggNOG-mapper	UHGV-1350696_15	748727.CLJU_c30720	171.0	0	N/A	N/A
Pfam	UHGV-1350696_15	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1350696_15	MF_01408,TIGR02170	N/A	N/A	N/A	N/A
KOfam	UHGV-1350696_17	K25280	54.3	0.0000000000000017	gp2.5, ssb; T7 single-stranded DNA-binding protein	N/A
PHROG	UHGV-1350696_17	phrog_112	79.6	4.1e-23	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350696_17	UniRef90_A0A3A6W7M3	77.0	0.0000000000000638	N/A	N/A
eggNOG-mapper	UHGV-1350696_17	500635.MITSMUL_03081	81.6	2.29e-16	N/A	N/A
Pfam	UHGV-1350696_17	PF21265	N/A	N/A	Single-stranded DNA-binding protein, Bacteriophage T7	SBB_T7
structural_annotation	UHGV-1350696_17	PF21265,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-1350696_18	K21525	200.9	0	Gp3; endonuclease I [EC:3.1.21.2]	N/A
PHROG	UHGV-1350696_18	phrog_945	167.3	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350696_18	UniRef90_UPI0010328C79	171.0	0	endonuclease I	N/A
eggNOG-mapper	UHGV-1350696_18	910314.HMPREF9220_0739	170.0	0	Phage endonuclease I	N/A
Pfam	UHGV-1350696_18	PF05367	N/A	N/A	Phage endonuclease I	Phage_endo_I
structural_annotation	UHGV-1350696_18	PF05367,COG1787	N/A	N/A	N/A	N/A
KOfam	UHGV-1350696_20	K21502	604.8	0	Gp4; DNA primase/helicase [EC:2.7.7.- 5.6.2.3]	N/A
PHROG	UHGV-1350696_20	phrog_239	461.5	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350696_20	UniRef90_A0A1M6MES9	691.0	0	Twinkle protein	N/A
eggNOG-mapper	UHGV-1350696_20	910314.HMPREF9220_0737	665.0	0	DNA primase activity	N/A
Pfam	UHGV-1350696_20	PF21268	N/A	N/A	Bacteriophage T7 DNA helicase/primase, N-terminal a+b fold	Helic-prim_T7_N
Pfam	UHGV-1350696_20	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-1350696_20	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1350696_20	COG0305	N/A	N/A	Replicative DNA helicase	N/A
HAMAP	UHGV-1350696_20	MF_04154	N/A	N/A	DNA helicase/primase [4]	N/A
structural_annotation	UHGV-1350696_20	PF03796,PF21268,MF_04154,NF005424,TIGR01391,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-1350696_21	K21238	512.0	0	Gp5; T7 DNA-directed DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-1350696_21	phrog_15971	393.8	0	DNA polymerase I	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350696_21	UniRef90_A0A1M6MFE6	826.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1350696_21	910314.HMPREF9220_0734	798.0	0	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	N/A
Pfam	UHGV-1350696_21	PF13482	N/A	N/A	RNase_H superfamily	RNase_H_2
Pfam	UHGV-1350696_21	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-1350696_21	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-1350696_21	PF00476,PF13482,MF_04101,NF004397,COG0749	N/A	N/A	N/A	N/A
KOfam	UHGV-1350696_24	K23786	99.7	1.5e-29	exoA; 5'-3' exonuclease [EC:3.1.11.-]	N/A
PHROG	UHGV-1350696_24	phrog_107	206.4	0	RNaseH	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1350696_24	UniRef90_A0A1M6MG40	306.0	0	DNA polymerase-1	N/A
eggNOG-mapper	UHGV-1350696_24	910314.HMPREF9220_0733	254.0	0	nuclease activity	N/A
Pfam	UHGV-1350696_24	PF02739	N/A	N/A	5'-3' exonuclease, N-terminal resolvase-like domain	5_3_exonuc_N
COG	UHGV-1350696_24	COG0258	N/A	N/A	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	N/A
structural_annotation	UHGV-1350696_24	PF02739,MF_04140,NF011544,COG0258	N/A	N/A	N/A	N/A
Pfam	UHGV-1350696_27	PF11653	N/A	N/A	Bacteriophage T7 virion assembly protein	VirionAssem_T7
PHROG	UHGV-1350696_28	phrog_449	635.2	0	head-tail adaptor	connector
UniRef90	UHGV-1350696_28	UniRef90_A0A1M6MG79	606.0	0	Bacteriophage head to tail connecting protein	N/A
eggNOG-mapper	UHGV-1350696_28	910314.HMPREF9220_0729	556.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1350696_28	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1350696_28	PF12236,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_29	phrog_1052	193.6	0	head assembly	head and packaging
UniRef90	UHGV-1350696_29	UniRef90_A0A1M6MGQ8	182.0	0	Phage T7 capsid assembly protein	N/A
eggNOG-mapper	UHGV-1350696_29	910314.HMPREF9220_0728	157.0	3.78351e-44	Phage T7 capsid assembly protein	N/A
Pfam	UHGV-1350696_29	PF05396	N/A	N/A	Phage T7 capsid assembly protein	Phage_T7_Capsid
structural_annotation	UHGV-1350696_29	PF05396	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_30	phrog_267	289.1	0	major head protein	head and packaging
UniRef90	UHGV-1350696_30	UniRef90_UPI001032B69C	408.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1350696_30	910314.HMPREF9220_0727	449.0	0	N/A	N/A
Pfam	UHGV-1350696_30	PF21703	N/A	N/A	Major capsid protein	Gp10A-like
structural_annotation	UHGV-1350696_30	PF21703,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_31	phrog_446	194.1	0	tail protein	tail
UniRef90	UHGV-1350696_31	UniRef90_UPI0015593CFE	208.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1350696_31	910314.HMPREF9220_0726	207.0	0	Tail tubular protein	N/A
Pfam	UHGV-1350696_31	PF17212	N/A	N/A	Tail tubular protein	Tube
structural_annotation	UHGV-1350696_31	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_32	phrog_457	815.1	0	tail protein	tail
UniRef90	UHGV-1350696_32	UniRef90_A0A2Z2U7S2	641.0	0	Putative tail tubular protein B	N/A
eggNOG-mapper	UHGV-1350696_32	910314.HMPREF9220_0725	704.0	0	N/A	N/A
structural_annotation	UHGV-1350696_32	PF11134,MF_00923,NF000022,COG4257	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_33	phrog_308	83.9	2.1e-24	internal virion protein	head and packaging
Pfam	UHGV-1350696_33	PF11090	N/A	N/A	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
PHROG	UHGV-1350696_34	phrog_805	95.7	6.2e-28	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1350696_34	1262914.BN533_00636	115.0	6.28e-30	N/A	N/A
structural_annotation	UHGV-1350696_34	PF10774	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1350696_35	910314.HMPREF9220_0722	81.6	0.000000000000584	N/A	N/A
structural_annotation	UHGV-1350696_35	MF_04122	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_36	phrog_342	282.8	0	internal virion protein with endolysin domain	head and packaging
UniRef90	UHGV-1350696_36	UniRef90_A0A1M6MGY6	605.0	0	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1350696_36	910314.HMPREF9220_0721	299.0	0	N/A	N/A
structural_annotation	UHGV-1350696_36	MF_04121,NF038016,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_37	phrog_13481	83.3	2.2e-24	tail fiber protein	tail
eggNOG-mapper	UHGV-1350696_37	910314.HMPREF9220_0720	165.0	3.30987e-42	Phage T7 tail fibre protein	N/A
Pfam	UHGV-1350696_37	PF03906	N/A	N/A	Phage T7 tail fibre protein	Phage_T7_tail
structural_annotation	UHGV-1350696_39	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1350696_41	1408437.JNJN01000043_gene803	75.5	0.0000000000000799	N/A	N/A
KOfam	UHGV-1350696_45	K02395	86.6	4.7e-25	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1350696_45	phrog_3513	135.4	4.79999e-40	endolysin	lysis
UniRef90	UHGV-1350696_45	UniRef90_A1HR64	188.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	N/A
eggNOG-mapper	UHGV-1350696_45	401526.TcarDRAFT_1294	188.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1350696_45	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-1350696_45	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1350696_45	PF01832,NF038016,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-1350696_47	phrog_38	309.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1350696_47	UniRef90_A0A3A6W2V7	772.0	0	DNA maturase B	N/A
eggNOG-mapper	UHGV-1350696_47	910314.HMPREF9220_0713	763.0	0	chromosome segregation	N/A
NCBIFam	UHGV-1350696_47	NF033889.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1350696_47	COG5410	N/A	N/A	N/A	N/A
HAMAP	UHGV-1350696_47	MF_04147	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-1350696_47	PF17289,PF05876,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1350696_48	PF03895	N/A	N/A	N/A	N/A