UHGV-1358013 (vOTU-017660)

Viral Genome: UHGV-1358013

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1358013
vOTU ID	vOTU-017660
Representative Genome?	Yes
Source	GVD
Original Genome ID	Shkoporov_2018_SRR6128077_NODE_51_length_34101_cov_21.178053
Associated Biosample	SAMN07646510
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	78.77 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9764
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	13.04
Jumbo Phage?	No

Genome Content
Length (bps)	34,101
GC Content	43.68%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	59
CDS Density	89%
Average CDS Length (bps)	517.17
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1358013_1	phrog_419	96.3	4.1e-28	N/A	unknown function
UniRef90	UHGV-1358013_1	UniRef90_A0A0V8CZM6	118.0	5.83e-32	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1358013_1	476272.RUMHYD_03324	125.0	1.86e-35	N/A	N/A
PHROG	UHGV-1358013_2	phrog_424	53.0	0.0000000000000047	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1358013_2	UniRef90_A0A2H4JC51	367.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-1358013_2	693746.OBV_43240	429.0	0	N/A	N/A
COG	UHGV-1358013_2	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
AcrCatalog	UHGV-1358013_3	cluster_11670	51.6	0.0000000000181	NA	N/A
PHROG	UHGV-1358013_6	phrog_9298	360.6	0	radical SAM domain protein	other
UniRef90	UHGV-1358013_6	UniRef90_A0A6L6XJP0	559.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-1358013_6	1235793.C809_02647	422.0	0	N/A	N/A
COG	UHGV-1358013_6	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1358013_6	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358013_10	UniRef90_A0A395WBY6	77.0	0.0000000000000115	N/A	N/A
Pfam	UHGV-1358013_10	PF04448	N/A	N/A	N/A	DUF551
eggNOG-mapper	UHGV-1358013_11	610130.Closa_1382	48.5	0.00000101	N/A	N/A
structural_annotation	UHGV-1358013_11	PF18350,MF_00754,NF003018	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_12	phrog_15768	102.9	9.1e-37	N/A	unknown function
UniRef90	UHGV-1358013_12	UniRef90_R6RVQ1	199.0	0	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-1358013_12	397291.C804_01603	66.2	0.000000000271	DnaD domain protein	N/A
Pfam	UHGV-1358013_12	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1358013_12	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1358013_12	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_13	phrog_244	70.2	4.3e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1358013_13	742740.HMPREF9474_03491	177.0	0	N/A	N/A
structural_annotation	UHGV-1358013_13	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_14	phrog_2113	52.7	0.0000000000000053	N/A	unknown function
structural_annotation	UHGV-1358013_14	PF01978,TIGR01610,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_15	phrog_7566	87.4	1.1e-25	N/A	unknown function
UniRef90	UHGV-1358013_15	UniRef90_A0A414AP32	171.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1358013_15	1304866.K413DRAFT_1198	59.3	0.000000000367	N/A	N/A
PHROG	UHGV-1358013_16	phrog_72	61.1	1.6e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1358013_16	411468.CLOSCI_00314	142.0	2.96e-40	N/A	N/A
structural_annotation	UHGV-1358013_16	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_17	phrog_659	52.4	0.0000000000000058	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358013_17	UniRef90_A0A416L738	328.0	0	N/A	N/A
eggNOG-mapper	UHGV-1358013_17	33035.JPJF01000135_gene5082	259.0	0	N/A	N/A
Pfam	UHGV-1358013_17	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1358013_17	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358013_22	742735.HMPREF9467_00844	107.0	1.31e-24	N/A	N/A
structural_annotation	UHGV-1358013_27	PF13601,TIGR04176	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_30	phrog_8	55.8	0.0000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358013_30	UniRef90_A0A5M9HYA8	98.2	1.04e-25	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1358013_30	1304866.K413DRAFT_3003	73.9	4.77e-16	addiction module antidote protein HigA	N/A
Pfam	UHGV-1358013_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1358013_30	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1358013_30	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1358013_31	K22300	49.5	0.000000000000093	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1358013_31	phrog_8	62.0	1.2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358013_31	UniRef90_A0A0E2HFR2	139.0	6.04999e-40	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1358013_31	411460.RUMTOR_02056	115.0	2.11e-31	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1358013_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1358013_31	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1358013_31	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_32	phrog_87	67.1	2e-19	metallo-protease	other
UniRef90	UHGV-1358013_32	UniRef90_A0A173TZ87	136.0	1.26e-38	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-1358013_32	476272.RUMHYD_01733	111.0	2.04e-29	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1358013_32	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1358013_32	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1358013_32	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_33	phrog_6148	51.4	0.000000000000013	beta-lactamase-inhibitor protein BLIP	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1358013_33	UniRef90_UPI0013F64234	123.0	3.21e-31	N/A	N/A
eggNOG-mapper	UHGV-1358013_33	1132442.KB889752_gene887	53.5	0.00000505	N/A	N/A
structural_annotation	UHGV-1358013_33	PF12978,PF20794,MF_00925,NF008423,COG4687,COG2913	N/A	N/A	N/A	N/A
KOfam	UHGV-1358013_36	K14059	150.5	1.96182e-44	int; integrase	N/A
PHROG	UHGV-1358013_36	phrog_1	154.5	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-1358013_36	UniRef90_A0A2H4J8J9	424.0	0	Putative integrase protein	N/A
eggNOG-mapper	UHGV-1358013_36	1304866.K413DRAFT_1180	380.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1358013_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1358013_36	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1358013_36	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358013_39	1298920.KI911353_gene541	72.0	0.00000000000491	ATPase involved in DNA repair	N/A
COG	UHGV-1358013_39	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-1358013_39	PF03425,NF033675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358013_40	1298920.KI911353_gene541	70.9	0.000000000000364	ATPase involved in DNA repair	N/A
COG	UHGV-1358013_40	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-1358013_41	411902.CLOBOL_00122	137.0	1.91e-39	N/A	N/A
PHROG	UHGV-1358013_42	phrog_18725	63.3	4.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1358013_42	411902.CLOBOL_00123	123.0	4.84e-34	N/A	N/A
PHROG	UHGV-1358013_43	phrog_32744	166.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1358013_43	411902.CLOBOL_00124	446.0	0	N/A	N/A
structural_annotation	UHGV-1358013_43	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_44	phrog_1194	63.1	4.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1358013_44	411902.CLOBOL_00125	129.0	8.31e-37	N/A	N/A
structural_annotation	UHGV-1358013_44	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_45	phrog_37543	710.3	0	N/A	unknown function
UniRef90	UHGV-1358013_45	UniRef90_A0A1C6CG40	284.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1358013_45	411459.RUMOBE_01384	224.0	0	phage tail tape measure protein	N/A
COG	UHGV-1358013_45	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1358013_46	phrog_706	139.0	2.79993e-41	N/A	unknown function
UniRef90	UHGV-1358013_46	UniRef90_A0A1I0K8S4	195.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1358013_46	33035.JPJF01000106_gene3124	176.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1358013_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1358013_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_47	phrog_11299	97.4	1.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1358013_47	411459.RUMOBE_01382	102.0	4.76e-26	N/A	N/A
structural_annotation	UHGV-1358013_47	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_48	phrog_3099	106.6	2.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-1358013_48	476272.RUMHYD_01782	160.0	0	N/A	N/A
structural_annotation	UHGV-1358013_48	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_49	phrog_3266	91.2	8.7e-27	tail completion	connector
eggNOG-mapper	UHGV-1358013_49	476272.RUMHYD_01781	141.0	1.91e-40	N/A	N/A
structural_annotation	UHGV-1358013_49	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_50	phrog_556	73.0	3e-21	minor head protein	head and packaging
UniRef90	UHGV-1358013_50	UniRef90_UPI000E4989EB	198.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1358013_50	476272.RUMHYD_01780	169.0	0	N/A	N/A
Pfam	UHGV-1358013_50	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1358013_50	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_51	phrog_3366	97.0	1.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-1358013_51	476272.RUMHYD_01779	157.0	0	N/A	N/A
structural_annotation	UHGV-1358013_51	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_52	phrog_18218	137.1	4.69996e-41	N/A	unknown function
UniRef90	UHGV-1358013_52	UniRef90_A0A8D9PGR5	148.0	2.24208e-44	Holin	N/A
eggNOG-mapper	UHGV-1358013_52	411902.CLOBOL_03424	82.4	5.86e-19	N/A	N/A
structural_annotation	UHGV-1358013_52	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_53	phrog_774	68.0	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1358013_53	397290.C810_05225	142.0	2.56438e-43	N/A	N/A
KOfam	UHGV-1358013_55	K03427	156.1	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1358013_55	phrog_6380	413.0	0	DNA methyltransferase	other
UniRef90	UHGV-1358013_55	UniRef90_A0A2V2D6Q6	1005.0	0	N6_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-1358013_55	1444306.JFZC01000034_gene2643	406.0	0	type I restriction-modification system	N/A
PADLOC	UHGV-1358013_55	MTase_I_00005	114.5	2.8e-34	Type I methyltransferase	RM
Pfam	UHGV-1358013_55	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1358013_55	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1358013_55	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_56	phrog_541	95.4	4.1e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1358013_56	476272.RUMHYD_01778	124.0	3.85e-34	N/A	N/A
PHROG	UHGV-1358013_57	phrog_544	158.9	0	major head protein	head and packaging
UniRef90	UHGV-1358013_57	UniRef90_A0A395X7A1	603.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1358013_57	1232453.BAIF02000011_gene3359	384.0	0	N/A	N/A
Pfam	UHGV-1358013_57	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1358013_57	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1358013_58	phrog_194	69.4	6.6e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-1358013_58	UniRef90_UPI001D14C9C8	180.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1358013_58	476272.RUMHYD_01775	178.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1358013_58	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1358013_59	phrog_28802	229.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1358013_59	476272.RUMHYD_01772	202.0	0	N/A	N/A