UHGV-1367953 (vOTU-056153)

Viral Genome: UHGV-1367953

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1367953
vOTU ID	vOTU-056153
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0275161
Associated Biosample	SAMN05615096
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	21
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9821
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	53.82
Jumbo Phage?	No

Genome Content
Length (bps)	41,209
GC Content	37.26%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	53
CDS Density	93%
Average CDS Length (bps)	721.76
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1367953_1	phrog_26249	71.2	4.7e-21	N/A	unknown function
UniRef90	UHGV-1367953_1	UniRef90_UPI001D017339	158.0	9.80909e-45	chitosanase	N/A
eggNOG-mapper	UHGV-1367953_1	546273.VEIDISOL_01083	237.0	0	LysM domain	N/A
Pfam	UHGV-1367953_1	PF21277	N/A	N/A	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
COG	UHGV-1367953_1	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1367953_1	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_3	phrog_23091	216.4	0	N/A	unknown function
structural_annotation	UHGV-1367953_3	PF05105,NF035928	N/A	N/A	N/A	N/A
UniRef90	UHGV-1367953_5	UniRef90_A0A2S7ZGN5	1518.0	0	Pectate_lyase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1367953_5	1401067.HMPREF0872_07835	80.1	0.000000000000568	N/A	N/A
structural_annotation	UHGV-1367953_5	PF05096,PF03906,MF_03008,TIGR03866,COG3204	N/A	N/A	N/A	N/A
KOfam	UHGV-1367953_6	K20478	61.6	1.1e-18	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1367953_6	phrog_9880	269.7	0	N/A	unknown function
UniRef90	UHGV-1367953_6	UniRef90_A0A239Z8B8	4402.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1367953_6	699218.HMPREF0889_0277	505.0	0	N/A	N/A
UniRef90	UHGV-1367953_7	UniRef90_A0A2S7ZGT8	1227.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1367953_7	1123288.SOV_2c10740	114.0	2.31e-23	N/A	N/A
Pfam	UHGV-1367953_7	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
structural_annotation	UHGV-1367953_7	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_8	phrog_418	65.1	9.3e-19	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1367953_8	1401067.HMPREF0872_06765	164.0	0	N/A	N/A
structural_annotation	UHGV-1367953_8	TIGR02971	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_9	phrog_308	79.5	4.4e-23	internal virion protein	head and packaging
UniRef90	UHGV-1367953_9	UniRef90_UPI001D08FF44	199.0	0	N/A	N/A
Pfam	UHGV-1367953_9	PF11090	N/A	N/A	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
structural_annotation	UHGV-1367953_9	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_10	phrog_376	677.7	0	tail protein	tail
UniRef90	UHGV-1367953_10	UniRef90_A0A0U1KV93	352.0	0	N/A	N/A
eggNOG-mapper	UHGV-1367953_10	1401067.HMPREF0872_06775	670.0	0	N/A	N/A
structural_annotation	UHGV-1367953_10	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_11	phrog_394	172.3	0	tail protein	tail
UniRef90	UHGV-1367953_11	UniRef90_A0A1B1IRI7	75.9	0.00000000000011	Putative tail tubular protein	N/A
eggNOG-mapper	UHGV-1367953_11	1401067.HMPREF0872_06780	211.0	0	N/A	N/A
structural_annotation	UHGV-1367953_11	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_13	phrog_427	66.3	4.3e-19	N/A	unknown function
structural_annotation	UHGV-1367953_13	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_14	phrog_212	262.0	0	major head protein	head and packaging
UniRef90	UHGV-1367953_14	UniRef90_A0A239Z8I8	426.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-1367953_14	1401067.HMPREF0872_06795	451.0	0	N/A	N/A
Pfam	UHGV-1367953_14	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1367953_14	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_15	phrog_458	91.2	1.5e-26	protease	other
eggNOG-mapper	UHGV-1367953_15	1401067.HMPREF0872_06800	115.0	2.01e-29	N/A	N/A
PHROG	UHGV-1367953_16	phrog_528	82.6	2.3e-24	N/A	unknown function
UniRef90	UHGV-1367953_16	UniRef90_A0A8E8TUT9	55.8	0.0000000713	Endopeptidase	N/A
eggNOG-mapper	UHGV-1367953_16	1401067.HMPREF0872_06805	83.2	2.47e-19	N/A	N/A
PHROG	UHGV-1367953_17	phrog_332	466.7	0	head-tail adaptor	connector
UniRef90	UHGV-1367953_17	UniRef90_A0A239Z979	1100.0	0	Bacteriophage head to tail connecting protein	N/A
eggNOG-mapper	UHGV-1367953_17	1401067.HMPREF0872_06810	611.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1367953_17	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1367953_17	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_19	phrog_5902	251.4	0	N/A	unknown function
UniRef90	UHGV-1367953_19	UniRef90_UPI0018A6EFE4	581.0	0	terminase	N/A
eggNOG-mapper	UHGV-1367953_19	1200557.JHWV01000001_gene277	572.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-1367953_19	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1367953_19	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1367953_20	K07474	130.9	1.7e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1367953_20	phrog_51	136.1	1.50001e-40	terminase small subunit	head and packaging
UniRef90	UHGV-1367953_20	UniRef90_A0A2S7ZGQ0	261.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1367953_20	1235800.C819_00494	119.0	1.63e-32	Terminase small subunit	N/A
Pfam	UHGV-1367953_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1367953_20	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1367953_20	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_24	phrog_36	48.2	0.0000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-1367953_24	UniRef90_UPI001959B6F9	56.2	0.0000003	N/A	N/A
eggNOG-mapper	UHGV-1367953_24	706434.HMPREF9429_00383	52.0	0.00000232	N/A	N/A
structural_annotation	UHGV-1367953_24	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_26	phrog_21026	138.8	2.20004e-41	N/A	unknown function
PHROG	UHGV-1367953_27	phrog_419	98.0	1.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1367953_27	1123263.AUKY01000015_gene1587	93.2	5.75e-24	N/A	N/A
structural_annotation	UHGV-1367953_27	PF14083	N/A	N/A	N/A	N/A
KOfam	UHGV-1367953_31	K19232	201.6	0	btaE; hyaluronate-binding autotransporter adhesin	N/A
UniRef90	UHGV-1367953_31	UniRef90_A0A239Z9M8	485.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-1367953_31	1128111.HMPREF0870_01786	156.0	2.13e-39	Hep Hag repeat protein	N/A
Pfam	UHGV-1367953_31	PF05658	N/A	N/A	YadA head domain repeat (2 copies)	YadA_head
Pfam	UHGV-1367953_31	PF05662	N/A	N/A	Coiled stalk of trimeric autotransporter adhesin	YadA_stalk
Pfam	UHGV-1367953_31	PF03895	N/A	N/A	YadA-like membrane anchor domain	YadA_anchor
COG	UHGV-1367953_31	COG5295	N/A	N/A	Autotransporter adhesin	N/A
structural_annotation	UHGV-1367953_31	PF03895,NF033478,COG5295	N/A	N/A	N/A	N/A
KOfam	UHGV-1367953_32	K01520	155.8	0	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1367953_32	phrog_135	156.0	0	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367953_32	UniRef90_A0A2S7ZGW5	263.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1367953_32	36080.S2JYN8	124.0	1.14e-34	dUTPase	N/A
Pfam	UHGV-1367953_32	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1367953_32	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1367953_32	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1367953_32	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1367953_33	PF02796,TIGR04381,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_34	phrog_244	56.2	7.4e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367953_34	UniRef90_A0A841R0Q1	114.0	4.48e-31	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1367953_34	1123250.KB908417_gene653	110.0	2.8e-30	N/A	N/A
structural_annotation	UHGV-1367953_34	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_35	phrog_2882	198.1	0	DNA methyltransferase	other
UniRef90	UHGV-1367953_35	UniRef90_UPI000E75FDEB	306.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1367953_35	565653.EGBG_01954	207.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1367953_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1367953_36	phrog_1672	45.9	0.00000000000063	N/A	unknown function
UniRef90	UHGV-1367953_36	UniRef90_F5L204	119.0	7.21e-32	Conserved domain protein	N/A
KOfam	UHGV-1367953_37	K03111	154.4	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1367953_37	phrog_44	133.3	1.5e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367953_37	UniRef90_A0A239Z9X8	236.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1367953_37	936589.HMPREF1521_1228	197.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1367953_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1367953_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1367953_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1367953_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1367953_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_39	phrog_9804	65.3	9.6e-19	N/A	unknown function
structural_annotation	UHGV-1367953_39	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_40	phrog_5968	183.0	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367953_40	UniRef90_UPI0019608C6C	335.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1367953_40	565664.EFXG_01794	199.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-1367953_40	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1367953_40	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1367953_40	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1367953_40	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_42	phrog_72	62.9	4.9e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367953_42	UniRef90_R5BGH3	128.0	2.8e-34	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1367953_42	1507.HMPREF0262_00432	99.8	6.99e-24	N/A	N/A
PHROG	UHGV-1367953_43	phrog_2324	166.3	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1367953_43	UniRef90_UPI001402D75D	318.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1367953_43	1209989.TepiRe1_1126	139.0	5.97e-39	ERF superfamily	N/A
Pfam	UHGV-1367953_43	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1367953_43	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_44	phrog_674	63.3	1e-19	N/A	unknown function
UniRef90	UHGV-1367953_44	UniRef90_UPI000E71DE97	477.0	0	N/A	N/A
eggNOG-mapper	UHGV-1367953_44	318464.IO99_00465	80.5	0.0000000000000166	N/A	N/A
Pfam	UHGV-1367953_44	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1367953_44	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1367953_45	NF008912	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_46	phrog_7735	83.7	1.6e-24	excisionase	integration and excision
UniRef90	UHGV-1367953_46	UniRef90_A0A2S7ZGX8	164.0	0	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-1367953_46	431943.CKL_2956	50.4	0.00000112	N/A	N/A
Pfam	UHGV-1367953_46	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1367953_46	PF12728,NF033787,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1367953_47	UniRef90_A0A533STR5	64.3	0.00000000000299	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1367953_47	887929.HMP0721_1290	59.3	0.0000000000641	Helix-turn-helix domain of resolvase	N/A
structural_annotation	UHGV-1367953_47	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1367953_48	K22299	51.8	0.000000000000018	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1367953_48	phrog_8	49.8	0.000000000000071	transcriptional regulator	transcription regulation
UniRef90	UHGV-1367953_48	UniRef90_A0A239ZAB0	223.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-1367953_48	706434.HMPREF9429_00594	127.0	1.55e-36	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1367953_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1367953_48	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1367953_48	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_50	phrog_20936	101.2	5.3e-30	N/A	unknown function
UniRef90	UHGV-1367953_50	UniRef90_UPI001D086FA7	145.0	7.84727e-44	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1367953_50	861450.HMPREF0080_02020	60.8	0.0000000000416	N/A	N/A
Pfam	UHGV-1367953_50	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1367953_50	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1367953_51	K14059	250.0	0	int; integrase	N/A
PHROG	UHGV-1367953_51	phrog_1	225.0	0	integrase	integration and excision
UniRef90	UHGV-1367953_51	UniRef90_A0A239Z9S1	695.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-1367953_51	1401067.HMPREF0872_00475	234.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1367953_51	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1367953_51	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1367953_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1367953_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1367953_51	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1367953_53	phrog_10797	202.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1367953_53	883156.HMPREF9282_00972	144.0	4.22996e-41	N/A	N/A
structural_annotation	UHGV-1367953_53	PF06531	N/A	N/A	N/A	N/A