UHGV-1379771 (vOTU-033973)

Viral Genome: UHGV-1379771

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1379771
vOTU ID	vOTU-033973
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0170930
Associated Biosample	SAMEA2737875
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	55.5 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9807
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	21.61
Jumbo Phage?	No

Genome Content
Length (bps)	23,328
GC Content	55.28%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	39
CDS Density	93%
Average CDS Length (bps)	553.92
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1379771_1	phrog_64	86.3	1.3e-25	portal protein	head and packaging
UniRef90	UHGV-1379771_1	UniRef90_A0A6N7TNT3	540.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1379771_1	642492.Clole_2764	80.5	0.0000000000000345	phage portal protein, SPP1	N/A
Pfam	UHGV-1379771_1	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1379771_1	PF05133,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379771_2	PF08863,MF_01077	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_3	phrog_2468	77.7	6.7e-23	head morphogenesis	head and packaging
UniRef90	UHGV-1379771_3	UniRef90_A0A844DBI4	636.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1379771_3	1504822.CCNO01000013_gene286	129.0	2.17e-30	cell adhesion	N/A
Pfam	UHGV-1379771_3	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1379771_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379771_3	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_4	phrog_8680	201.3	0	N/A	unknown function
UniRef90	UHGV-1379771_4	UniRef90_A0A844D688	457.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379771_4	1423790.BN53_04265	182.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-1379771_4	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1379771_4	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1379771_4	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_6	phrog_5	47.6	0.00000000000038	tail completion or Neck1 protein	connector
UniRef90	UHGV-1379771_6	UniRef90_A0A844DDB3	279.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1379771_6	1123309.AQYB01000018_gene814	88.2	2.37e-20	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-1379771_6	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379771_8	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_9	phrog_544	107.0	1.8e-31	major head protein	head and packaging
UniRef90	UHGV-1379771_9	UniRef90_A0A1C6B5R0	320.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1379771_9	476272.RUMHYD_01776	284.0	0	N/A	N/A
structural_annotation	UHGV-1379771_9	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_11	phrog_17977	47.4	0.00000000000028	N/A	unknown function
UniRef90	UHGV-1379771_11	UniRef90_A0A844DHJ8	243.0	0	Phage head closure protein	N/A
NCBIFam	UHGV-1379771_11	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1379771_11	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379771_12	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_13	phrog_885	60.8	1.8e-17	major tail protein	tail
eggNOG-mapper	UHGV-1379771_13	457396.CSBG_01054	59.3	0.0000000552	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-1379771_13	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-1379771_13	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_16	phrog_28775	135.4	4.00001e-40	tail length tape measure protein	tail
UniRef90	UHGV-1379771_16	UniRef90_A0A844DDD5	1131.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1379771_16	1492737.FEM08_12070	142.0	1.39e-32	tape measure	N/A
Pfam	UHGV-1379771_16	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1379771_16	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1379771_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1379771_16	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_17	phrog_3558	269.7	0	tail protein	tail
UniRef90	UHGV-1379771_17	UniRef90_A0A844DGT5	1163.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1379771_17	1391188.A0A068EMP3_9CAUD	136.0	1.17e-29	N/A	N/A
Pfam	UHGV-1379771_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1379771_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1379771_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379771_19	1304866.K413DRAFT_1235	60.8	0.00000000681	PFAM Phage tail protein	N/A
COG	UHGV-1379771_19	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1379771_19	PF11681,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_21	phrog_19280	84.2	1e-24	N/A	unknown function
UniRef90	UHGV-1379771_21	UniRef90_A0A844DHL3	749.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379771_21	1235797.C816_02837	57.4	0.00000552	N/A	N/A
Pfam	UHGV-1379771_21	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1379771_21	PF19789	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379771_23	UniRef90_A0A844DDG4	53.5	0.0000000189	XkdX family protein	N/A
eggNOG-mapper	UHGV-1379771_23	697281.Mahau_0596	45.1	0.00000636	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1379771_23	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1379771_23	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-1379771_24	K07273	167.3	0	acm; lysozyme	N/A
PHROG	UHGV-1379771_24	phrog_291	130.0	2.3e-38	endolysin	lysis
UniRef90	UHGV-1379771_24	UniRef90_UPI001D0EE7D8	303.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1379771_24	748224.HMPREF9436_00154	280.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1379771_24	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1379771_24	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1379771_24	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_25	phrog_1863	76.5	1.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-1379771_25	718252.FP2_04900	145.0	8.40779e-45	N/A	N/A
PHROG	UHGV-1379771_26	phrog_15303	82.7	3.4e-24	N/A	unknown function
structural_annotation	UHGV-1379771_28	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379771_29	1235798.C817_04600	52.4	0.000000292	N/A	N/A
structural_annotation	UHGV-1379771_29	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-1379771_31	phrog_3754	94.0	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1379771_31	1485543.JMME01000025_gene2462	105.0	6.9e-28	N/A	N/A
PHROG	UHGV-1379771_32	phrog_21718	88.3	8.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1379771_32	397290.C810_05210	81.3	2.82e-17	N/A	N/A
PHROG	UHGV-1379771_33	phrog_22984	69.2	5.8e-20	N/A	unknown function
PHROG	UHGV-1379771_34	phrog_16490	200.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1379771_34	397290.C810_01328	126.0	1.44e-31	N/A	N/A
PHROG	UHGV-1379771_36	phrog_20016	217.1	0	N/A	unknown function
UniRef90	UHGV-1379771_36	UniRef90_A0A285PT46	205.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1379771_36	1226322.HMPREF1545_00077	191.0	0	N/A	N/A
structural_annotation	UHGV-1379771_36	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379771_37	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379771_39	657322.FPR_28130	68.2	0.0000000000000358	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA	N/A
COG	UHGV-1379771_39	COG0691	N/A	N/A	tmRNA-binding protein	N/A