UHGV-1381297 (vOTU-002169)

Viral Genome: UHGV-1381297

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1381297
vOTU ID	vOTU-002169
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0284765
Associated Biosample	SAMN03283292
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9806
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	23.75
Jumbo Phage?	No

Genome Content
Length (bps)	43,052
GC Content	38.62%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	72
CDS Density	91%
Average CDS Length (bps)	541.96
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1381297_2	phrog_606	49.1	0.000000000000011	terminase small subunit	head and packaging
Pfam	UHGV-1381297_2	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-1381297_3	K21523	66.3	1.5e-20	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-1381297_3	phrog_2	96.1	5.9e-28	terminase large subunit	head and packaging
UniRef90	UHGV-1381297_3	UniRef90_R5AHR8	443.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1381297_3	693746.OBV_23980	422.0	0	phage Terminase large subunit	N/A
COG	UHGV-1381297_3	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-1381297_3	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_5	phrog_156	157.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1381297_5	1408437.JNJN01000001_gene1708	338.0	0	N/A	N/A
structural_annotation	UHGV-1381297_5	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1381297_6	755731.Clo1100_2435	63.5	0.00000000812	N/A	N/A
PHROG	UHGV-1381297_7	phrog_422	106.8	2.1e-31	major head protein	head and packaging
UniRef90	UHGV-1381297_7	UniRef90_UPI00082A3F03	202.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1381297_7	1408437.JNJN01000001_gene1710	181.0	0	N/A	N/A
structural_annotation	UHGV-1381297_7	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381297_8	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-1381297_9	UniRef90_A0A847CX66	479.0	0	N/A	N/A
eggNOG-mapper	UHGV-1381297_9	871968.DESME_08885	127.0	6.06e-28	N/A	N/A
structural_annotation	UHGV-1381297_9	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_11	phrog_24267	75.4	8.6e-22	N/A	unknown function
UniRef90	UHGV-1381297_11	UniRef90_A0A2H4JF11	68.6	0.000000000078	Putative structural protein	N/A
eggNOG-mapper	UHGV-1381297_11	411490.ANACAC_03790	90.1	3.5e-19	tail collar domain protein	N/A
COG	UHGV-1381297_11	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1381297_11	COG4675	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1381297_12	PF10618	N/A	N/A	N/A	N/A
NCBIFam	UHGV-1381297_13	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1381297_13	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_15	phrog_22984	52.2	0.000000000000012	N/A	unknown function
PHROG	UHGV-1381297_16	phrog_16490	44.9	0.00000000000033	N/A	unknown function
eggNOG-mapper	UHGV-1381297_16	476272.RUMHYD_01770	71.6	0.00000000000116	N/A	N/A
PHROG	UHGV-1381297_17	phrog_11037	52.8	0.0000000000000056	N/A	unknown function
UniRef90	UHGV-1381297_17	UniRef90_A0A2V2EB84	94.0	3e-19	EF-hand domain-containing protein	N/A
eggNOG-mapper	UHGV-1381297_17	1232449.BAHV02000016_gene1807	79.7	0.0000000000000121	N/A	N/A
structural_annotation	UHGV-1381297_17	PF08460,PF01551,NF040883,NF033202,COG0739,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_18	phrog_881	66.5	2.6e-19	holin	lysis
UniRef90	UHGV-1381297_18	UniRef90_UPI0018A8FD4D	77.0	9.06e-17	phage holin	N/A
eggNOG-mapper	UHGV-1381297_18	1680.BADO_1216	71.6	0.0000000000000022	Putative phage holin Dp-1	N/A
Pfam	UHGV-1381297_18	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1381297_18	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_19	phrog_37604	82.6	4.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-1381297_19	1232443.BAIA02000078_gene10	78.2	1.94e-16	N/A	N/A
eggNOG-mapper	UHGV-1381297_21	871968.DESME_08840	131.0	1.31e-27	N/A	N/A
structural_annotation	UHGV-1381297_22	PF16640,TIGR04488	N/A	N/A	N/A	N/A
KOfam	UHGV-1381297_23	K16628	59.9	1.3e-17	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1381297_23	phrog_819	50.1	0.000000000000033	tail protein	tail
Pfam	UHGV-1381297_23	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-1381297_24	K16628	67.4	3.3e-20	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1381297_24	phrog_819	96.6	8.2e-36	tail protein	tail
eggNOG-mapper	UHGV-1381297_24	290402.Cbei_3387	97.1	2.13e-21	N/A	N/A
Pfam	UHGV-1381297_24	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-1381297_25	phrog_5073	47.9	0.00000000000018	tail fiber protein	tail
Pfam	UHGV-1381297_25	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-1381297_27	K14059	174.7	0	int; integrase	N/A
PHROG	UHGV-1381297_27	phrog_1	160.0	0	integrase	integration and excision
UniRef90	UHGV-1381297_27	UniRef90_UPI00189AE8E1	219.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1381297_27	1123263.AUKY01000072_gene2117	131.0	6.86e-32	Phage integrase family	N/A
Pfam	UHGV-1381297_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1381297_27	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1381297_27	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1381297_28	K22300	54.6	0.0000000000000025	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1381297_28	phrog_8	57.2	4.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1381297_28	UniRef90_A0A1G6F4M6	66.6	0.00000000000494	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-1381297_28	697329.Rumal_3450	57.0	0.0000000244	N/A	N/A
PADLOC	UHGV-1381297_28	retron_type_VI_hth_cluster2_1	44.5	0.0000000000045	N/A	Retron
Pfam	UHGV-1381297_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1381297_28	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-1381297_29	UniRef90_B0PAK0	49.3	0.00000352	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1381297_29	445972.ANACOL_01800	49.3	0.00000059	N/A	N/A
Pfam	UHGV-1381297_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1381297_29	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1381297_29	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-1381297_30	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-1381297_32	phrog_155	79.1	7e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381297_32	UniRef90_UPI001E498420	115.0	1.13e-28	ERF family protein	N/A
eggNOG-mapper	UHGV-1381297_32	318464.IO99_00460	95.5	1.37e-21	ERF superfamily	N/A
Pfam	UHGV-1381297_32	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1381297_32	PF04404	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_33	phrog_6244	79.8	4.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-1381297_33	1399942.U3PIX9_9CAUD	53.9	0.0000000638	N/A	N/A
structural_annotation	UHGV-1381297_33	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_34	phrog_298	77.9	7.1e-23	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381297_34	UniRef90_A0A3D5XTJ3	121.0	5.57e-31	Cas_Cas4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1381297_34	1399942.U3PDT7_9CAUD	92.8	1.4e-20	nuclease activity	N/A
Pfam	UHGV-1381297_34	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-1381297_34	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_35	phrog_7566	76.0	3.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-1381297_35	1235800.C819_00511	67.8	0.000000000000432	N/A	N/A
PHROG	UHGV-1381297_36	phrog_1389	42.4	0.000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1381297_36	1347392.CCEZ01000060_gene3269	57.8	0.00000000314	N/A	N/A
structural_annotation	UHGV-1381297_36	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
KOfam	UHGV-1381297_37	K01160	52.0	0.00000000000002	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1381297_37	phrog_1682	67.1	2.8e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381297_37	UniRef90_F8J189	100.0	6.6e-25	Putative Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1381297_37	508419.F8J189_9CAUD	100.0	1.11e-25	magnesium ion binding	N/A
Pfam	UHGV-1381297_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1381297_37	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1381297_38	K03111	50.2	0.000000000000059	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1381297_38	phrog_44	56.9	5.2e-16	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381297_38	UniRef90_A0A6G7Y1U6	56.6	0.00000014	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1381297_38	406818.XBJ1_3380	56.2	0.0000000621	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1381297_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-1381297_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1381297_38	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1381297_41	phrog_5968	160.4	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1381297_41	UniRef90_A0A1J0GJL7	184.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1381297_41	1235802.C823_06033	144.0	4.71e-39	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-1381297_41	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1381297_41	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-1381297_41	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1381297_43	428127.EUBDOL_01238	55.5	0.00000000957	N/A	N/A
PHROG	UHGV-1381297_50	phrog_918	101.4	3.9e-30	N/A	unknown function
UniRef90	UHGV-1381297_50	UniRef90_UPI001D0B68F4	124.0	6.85e-35	N/A	N/A
eggNOG-mapper	UHGV-1381297_50	411473.RUMCAL_00361	103.0	9.3e-28	N/A	N/A
Pfam	UHGV-1381297_50	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1381297_50	PF19791	N/A	N/A	N/A	N/A
COG	UHGV-1381297_69	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
PHROG	UHGV-1381297_70	phrog_7245	118.0	4.5e-35	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1381297_70	UniRef90_A0A373CT88	138.0	1.17e-33	N/A	N/A
eggNOG-mapper	UHGV-1381297_70	97139.C824_00155	150.0	7.95e-39	N/A	N/A
Pfam	UHGV-1381297_70	PF08401	N/A	N/A	N-terminal domain of anti-restriction factor ArdC	ArdcN
Pfam	UHGV-1381297_70	PF18818	N/A	N/A	Zincin-like metallopeptidase	MPTase-PolyVal
COG	UHGV-1381297_70	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
structural_annotation	UHGV-1381297_70	PF18818,PF08401,COG4227	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1381297_71	97139.C824_00043	58.5	0.000000000693	N/A	N/A