UHGV-1384192 (vOTU-016724)

Viral Genome: UHGV-1384192

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1384192
vOTU ID	vOTU-016724
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0265490
Associated Biosample	SAMEA3449339
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	88.82 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9819
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	5.15
Jumbo Phage?	No

Genome Content
Length (bps)	39,419
GC Content	52.98%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	70
CDS Density	93%
Average CDS Length (bps)	523.33
Total tRNA Genes	2
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1384192_1	K19613	56.5	1.9e-16	SHOC2, SUR8; leucine-rich repeat protein SHOC2	N/A
eggNOG-mapper	UHGV-1384192_1	563031.HMPREF0666_01114	79.3	0.0000000000000129	N/A	N/A
Pfam	UHGV-1384192_1	PF00560	N/A	N/A	Leucine Rich Repeat	LRR_1
Pfam	UHGV-1384192_1	PF12799	N/A	N/A	Leucine Rich repeats (2 copies)	LRR_4
PHROG	UHGV-1384192_3	phrog_4973	77.1	2e-22	N/A	unknown function
UniRef90	UHGV-1384192_3	UniRef90_UPI001D0904CC	95.5	2.65e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1384192_3	880073.Calab_0752	58.5	0.000000000156	Helix-turn-helix domain	N/A
Pfam	UHGV-1384192_3	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1384192_3	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_6	phrog_14970	208.9	0	N/A	unknown function
UniRef90	UHGV-1384192_6	UniRef90_UPI00123F00F5	162.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1384192_6	397291.C804_03856	156.0	2.8026e-44	double-strand break repair protein	N/A
Pfam	UHGV-1384192_6	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1384192_6	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1384192_6	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_7	phrog_72	61.3	1.7e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1384192_7	UniRef90_UPI001F3F3E5C	165.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1384192_7	445972.ANACOL_01825	122.0	1.53e-32	N/A	N/A
structural_annotation	UHGV-1384192_7	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384192_8	UniRef90_A0A3D1LDS4	123.0	5.91e-35	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1384192_8	445972.ANACOL_01826	98.2	8.12e-26	HNH nucleases	N/A
Pfam	UHGV-1384192_8	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-1384192_10	K03111	125.9	5.3e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1384192_10	phrog_44	125.5	4.6e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1384192_10	UniRef90_R6LLA3	166.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1384192_10	693746.OBV_19910	159.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1384192_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1384192_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1384192_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1384192_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1384192_10	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384192_11	UniRef90_A0A7C1PUJ6	81.3	0.00000000000000414	N/A	N/A
structural_annotation	UHGV-1384192_11	PF07120,COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_12	phrog_757	137.7	5.70006e-41	DNA methyltransferase	other
UniRef90	UHGV-1384192_12	UniRef90_UPI001A9B5584	275.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1384192_12	748224.HMPREF9436_03069	205.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1384192_12	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
Pfam	UHGV-1384192_13	PF10957	N/A	N/A	Sporulation protein Cse60	Spore_Cse60
KOfam	UHGV-1384192_14	K00390	102.9	3.3e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1384192_14	phrog_424	125.7	2.7e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1384192_14	UniRef90_UPI001D087498	428.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1384192_14	1408437.JNJN01000032_gene2312	328.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1384192_14	BrxP_00001	67.2	1.8e-20	BrxP	BREX
Pfam	UHGV-1384192_14	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1384192_14	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1384192_14	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
Pfam	UHGV-1384192_15	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1384192_15	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_16	phrog_3136	147.3	3.64338e-44	N/A	unknown function
UniRef90	UHGV-1384192_16	UniRef90_UPI001C26B029	191.0	0	ASCH domain-containing protein	N/A
COG	UHGV-1384192_16	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1384192_16	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_17	phrog_38832	66.0	4.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-1384192_17	445972.ANACOL_00165	70.9	0.0000000000012	N/A	N/A
PHROG	UHGV-1384192_18	phrog_478	125.0	3.4e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1384192_18	UniRef90_R6E548	156.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-1384192_18	1111121.HMPREF1247_0834	92.4	2.93e-22	N/A	N/A
structural_annotation	UHGV-1384192_22	PF20549,MF_00436,NF005100,COG5475	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384192_26	UniRef90_A0A5C7LKL9	57.0	0.00000000562	N/A	N/A
eggNOG-mapper	UHGV-1384192_26	1357732.A0A059PYA6_9CAUD	48.1	0.00000357	N/A	N/A
Pfam	UHGV-1384192_26	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UniRef90	UHGV-1384192_27	UniRef90_UPI0019D1E2CF	290.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1384192_27	1410632.JHWW01000006_gene695	202.0	0	N/A	N/A
Pfam	UHGV-1384192_27	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1384192_27	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384192_28	PF10013	N/A	N/A	N/A	N/A
Pfam	UHGV-1384192_29	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-1384192_29	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
Pfam	UHGV-1384192_30	PF04297	N/A	N/A	Putative helix-turn-helix protein, YlxM / p13 like	UPF0122
PHROG	UHGV-1384192_31	phrog_1770	59.1	9.5e-17	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1384192_31	536233.CLO_1822	146.0	2.18042e-42	N/A	N/A
structural_annotation	UHGV-1384192_31	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-1384192_33	K03466	174.0	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-1384192_33	phrog_1358	142.5	1.69978e-42	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1384192_33	UniRef90_A0A3D3Y6X7	335.0	0	FtsK domain-containing protein	N/A
eggNOG-mapper	UHGV-1384192_33	1002672.SAR11G3_00415	142.0	4.12e-36	DNA segregation ATPase FtsK SpoIIIE	N/A
PADLOC	UHGV-1384192_33	SspH_00004	70.2	1.4e-20	SspH	SSP
Pfam	UHGV-1384192_33	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-1384192_33	COG0733	N/A	N/A	Na+-dependent transporter, SNF family	N/A
structural_annotation	UHGV-1384192_33	PF01580,MF_00350,TIGR03925,COG4128	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384192_36	PF10723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384192_37	877421.AUJT01000054_gene66	57.4	0.0000000552	N/A	N/A
Pfam	UHGV-1384192_37	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1384192_38	phrog_38	197.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1384192_38	UniRef90_UPI000419A6BC	413.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1384192_38	1232453.BAIF02000058_gene1623	417.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1384192_38	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1384192_38	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384192_38	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_39	phrog_64	210.6	0	portal protein	head and packaging
UniRef90	UHGV-1384192_39	UniRef90_A0A3D3Y472	790.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1384192_39	1123263.AUKY01000015_gene1609	375.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1384192_39	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1384192_39	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_40	phrog_324	43.2	0.0000000000096	head morphogenesis	head and packaging
UniRef90	UHGV-1384192_40	UniRef90_A0A3D3Y4T2	293.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1384192_40	1121451.DESAM_10288	51.2	0.00000564	head morphogenesis protein, SPP1 gp7	N/A
Pfam	UHGV-1384192_40	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1384192_40	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1384192_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1384192_40	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_43	phrog_544	71.3	1.1e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-1384192_43	428127.EUBDOL_01555	246.0	0	N/A	N/A
structural_annotation	UHGV-1384192_43	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-1384192_44	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1384192_44	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384192_45	1298920.KI911353_gene2656	89.0	5.95e-21	N/A	N/A
eggNOG-mapper	UHGV-1384192_46	476272.RUMHYD_01963	78.2	7.93e-16	N/A	N/A
structural_annotation	UHGV-1384192_47	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1384192_48	1298920.KI911353_gene2652	175.0	0	N/A	N/A
structural_annotation	UHGV-1384192_48	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384192_49	UniRef90_UPI001D0975F6	95.1	5.5e-23	N/A	N/A
eggNOG-mapper	UHGV-1384192_50	1121333.JMLH01000047_gene1011	49.7	0.0000042	N/A	N/A
PHROG	UHGV-1384192_51	phrog_1535	88.2	2.6e-26	tail length tape measure protein	tail
UniRef90	UHGV-1384192_51	UniRef90_A0A173WM72	102.0	1.01e-18	Phage-related protein	N/A
eggNOG-mapper	UHGV-1384192_51	1123263.AUKY01000015_gene1620	87.0	0.0000000000000133	Phage tail tape measure protein TP901	N/A
COG	UHGV-1384192_51	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1384192_52	phrog_1194	80.7	1.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-1384192_52	394503.Ccel_3034	74.7	0.00000000000000119	N/A	N/A
Pfam	UHGV-1384192_52	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1384192_52	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_53	phrog_32308	68.3	7.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-1384192_53	1235797.C816_04180	69.3	0.000000000175	N/A	N/A
structural_annotation	UHGV-1384192_53	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-1384192_57	K08131	95.2	2.5e-28	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-1384192_57	phrog_819	133.2	0	tail protein	tail
UniRef90	UHGV-1384192_57	UniRef90_UPI00068BE71D	95.5	9.78e-17	collagen-like protein	N/A
eggNOG-mapper	UHGV-1384192_57	1519439.JPJG01000060_gene1892	95.5	1.64e-17	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1384192_57	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1384192_57	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
KOfam	UHGV-1384192_60	K03651	62.0	1e-17	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-1384192_60	phrog_7158	54.3	7.8e-17	N/A	unknown function
UniRef90	UHGV-1384192_60	UniRef90_A0A1I1Z9R5	117.0	2.41e-24	Calcineurin-like phosphoesterase	N/A
structural_annotation	UHGV-1384192_60	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_61	phrog_937	52.7	0.0000000000000081	hemolysin	other
eggNOG-mapper	UHGV-1384192_61	1519439.JPJG01000023_gene533	75.1	2.28e-16	N/A	N/A
PHROG	UHGV-1384192_63	phrog_918	126.1	9.1e-38	N/A	unknown function
UniRef90	UHGV-1384192_63	UniRef90_UPI000F794B8B	127.0	1.57e-36	N/A	N/A
eggNOG-mapper	UHGV-1384192_63	632112.C1KFI4_9CAUD	129.0	2.88e-37	N/A	N/A
Pfam	UHGV-1384192_63	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1384192_63	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1384192_64	phrog_13256	63.7	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1384192_64	1226322.HMPREF1545_00166	75.1	6.75e-17	N/A	N/A
KOfam	UHGV-1384192_65	K01447	125.4	6.3e-37	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1384192_65	phrog_1794	131.3	9.1e-39	amidase	lysis
UniRef90	UHGV-1384192_65	UniRef90_A0A3D4VSU2	179.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1384192_65	411470.RUMGNA_02087	160.0	5.32493e-44	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1384192_65	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1384192_65	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1384192_65	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384192_66	UniRef90_A0A1C6JAI6	66.2	0.00000000000144	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1384192_66	PF16509,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1384192_67	K19167	118.7	6.9e-35	abiQ; protein AbiQ	N/A
PHROG	UHGV-1384192_67	phrog_9764	125.1	4.7e-37	N/A	unknown function
UniRef90	UHGV-1384192_67	UniRef90_A0A845R8D8	216.0	0	Type III toxin-antitoxin system ToxN/AbiQ family toxin	N/A
eggNOG-mapper	UHGV-1384192_67	1519439.JPJG01000060_gene1906	175.0	0	Toxin ToxN, type III toxin-antitoxin system	N/A
PADLOC	UHGV-1384192_67	AbiQ	149.9	2.38221e-44	AbiQ	Abi
Pfam	UHGV-1384192_67	PF13958	N/A	N/A	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
structural_annotation	UHGV-1384192_67	PF13958	N/A	N/A	N/A	N/A
UniRef90	UHGV-1384192_70	UniRef90_A0A7M1RSZ3	82.0	1.82e-16	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1384192_70	1378168.N510_03079	65.5	0.000000000129	N/A	N/A