UHGV-1390880 (vOTU-171092)

Viral Genome: UHGV-1390880

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1390880
vOTU ID	vOTU-171092
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0271478
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	68.91 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9807
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	20.19
Jumbo Phage?	No

Genome Content
Length (bps)	40,573
GC Content	39.23%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	56
CDS Density	85%
Average CDS Length (bps)	614.41
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1390880_2	phrog_874	185.1	0	N/A	unknown function
UniRef90	UHGV-1390880_2	UniRef90_A0A4P6LRJ9	197.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1390880_2	411468.CLOSCI_00298	202.0	0	N/A	N/A
structural_annotation	UHGV-1390880_2	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1390880_4	1120998.AUFC01000030_gene2222	51.6	0.000000278	N/A	N/A
PHROG	UHGV-1390880_5	phrog_20593	51.3	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1390880_5	1235790.C805_00036	52.0	0.0000000849	N/A	N/A
KOfam	UHGV-1390880_7	K02315	150.0	1.96182e-44	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1390880_7	phrog_50	152.0	4.2039e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1390880_7	UniRef90_UPI00189B8515	197.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1390880_7	1304880.JAGB01000002_gene2233	191.0	0	PFAM IstB-like ATP binding protein	N/A
Pfam	UHGV-1390880_7	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1390880_7	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1390880_7	PF01695,MF_01919,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_8	phrog_1578	45.5	0.00000000000052	N/A	unknown function
eggNOG-mapper	UHGV-1390880_8	867696.E1XTF6_BPSAV	50.1	0.000000451	N/A	N/A
UniRef90	UHGV-1390880_10	UniRef90_A0A173RE24	76.6	7.42e-17	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-1390880_10	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-1390880_10	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1390880_11	K14059	157.7	0	int; integrase	N/A
PHROG	UHGV-1390880_11	phrog_1	156.8	0	integrase	integration and excision
UniRef90	UHGV-1390880_11	UniRef90_A0A3R6B6C8	449.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1390880_11	537007.BLAHAN_05530	308.0	0	N/A	N/A
Pfam	UHGV-1390880_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1390880_11	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1390880_11	PF00589,PF02920,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_13	phrog_21718	58.7	9.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1390880_13	658655.HMPREF0988_00919	108.0	1.45e-27	N/A	N/A
structural_annotation	UHGV-1390880_13	NF033819	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_15	phrog_16490	185.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1390880_15	397290.C810_01328	208.0	0	N/A	N/A
PHROG	UHGV-1390880_16	phrog_20016	229.6	0	N/A	unknown function
UniRef90	UHGV-1390880_16	UniRef90_A0A285PT46	168.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1390880_16	397290.C810_05214	235.0	0	N/A	N/A
structural_annotation	UHGV-1390880_16	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1390880_17	658655.HMPREF0988_00915	71.2	0.00000000000286	N/A	N/A
PHROG	UHGV-1390880_18	phrog_1233	48.5	0.00000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1390880_18	397290.C810_01336	99.4	1.1e-25	N/A	N/A
structural_annotation	UHGV-1390880_20	PF10944	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_21	phrog_6246	61.9	4.5e-18	N/A	unknown function
structural_annotation	UHGV-1390880_21	PF04937,NF041175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1390880_23	658655.HMPREF0988_00903	47.8	0.00000236	N/A	N/A
eggNOG-mapper	UHGV-1390880_26	397290.C810_01353	290.0	0	N/A	N/A
PHROG	UHGV-1390880_28	phrog_236	105.9	6.6e-31	nucleotide kinase	other
UniRef90	UHGV-1390880_28	UniRef90_A0A8D9PGN7	139.0	3.48e-40	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-1390880_28	1123263.AUKY01000015_gene1590	85.1	2.83e-20	N/A	N/A
Pfam	UHGV-1390880_28	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-1390880_29	phrog_2685	42.2	0.000000000015	partition protein ATPase	other
Pfam	UHGV-1390880_29	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
KOfam	UHGV-1390880_30	K14060	112.6	4.4e-33	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1390880_30	phrog_125	171.1	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1390880_30	UniRef90_C0CM35	238.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-1390880_30	476272.RUMHYD_01910	238.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1390880_30	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1390880_30	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1390880_30	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_31	phrog_270	45.6	0.00000000000096	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1390880_31	UniRef90_UPI00155E0C72	85.1	0.000000000000001	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1390880_31	397290.C810_01368	139.0	2.72e-36	N/A	N/A
Pfam	UHGV-1390880_31	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1390880_31	PF13730,MF_01819,TIGR04176,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_32	phrog_38	158.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1390880_32	UniRef90_A0A8D9PG33	773.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1390880_32	1232453.BAIF02000058_gene1623	424.0	0	TIGRFAM Phage	N/A
COG	UHGV-1390880_32	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1390880_32	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_33	phrog_36	57.6	2.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1390880_33	UniRef90_A0A373NRA4	89.7	3.21e-20	N/A	N/A
eggNOG-mapper	UHGV-1390880_33	702437.HMPREF9432_00895	54.7	0.000000201	sigma factor activity	N/A
Pfam	UHGV-1390880_33	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1390880_33	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1390880_33	PF07374,MF_00674,NF005248,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_34	phrog_64	186.1	0	portal protein	head and packaging
UniRef90	UHGV-1390880_34	UniRef90_UPI001BC653D1	755.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1390880_34	1298920.KI911353_gene2663	446.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1390880_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1390880_34	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1390880_35	UniRef90_UPI001969B6C1	47.8	0.0000049	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1390880_35	1511.CLOST_0069	47.0	0.00000271	N/A	N/A
structural_annotation	UHGV-1390880_35	PF07878,NF041793,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_36	phrog_3377	160.1	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1390880_36	UniRef90_A0A1Y4FBI7	153.0	3.37993e-42	HTH psq-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1390880_36	1129192.A0A0E3D9L6_9CAUD	152.0	1.00893e-43	sequence-specific DNA binding transcription factor activity	N/A
UniRef90	UHGV-1390880_37	UniRef90_R6C0B6	119.0	8.97e-31	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1390880_38	phrog_909	79.3	3.7e-23	major head protein	head and packaging
UniRef90	UHGV-1390880_38	UniRef90_R7BGI8	176.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1390880_38	1536772.R70723_06665	55.5	0.000000025	N/A	N/A
PHROG	UHGV-1390880_39	phrog_29	153.2	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-1390880_39	UniRef90_A0A412RQU1	639.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1390880_39	1296659.S5MNB6_9CAUD	169.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1390880_39	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1390880_39	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1390880_40	UniRef90_A0A416G2T8	72.4	0.00000000000000748	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1390880_40	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1390880_41	397290.C810_01402	62.8	0.0000000000398	N/A	N/A
PHROG	UHGV-1390880_42	phrog_1863	49.0	0.000000000000062	N/A	unknown function
eggNOG-mapper	UHGV-1390880_42	742741.HMPREF9475_00442	68.2	0.000000000000163	N/A	N/A
PHROG	UHGV-1390880_43	phrog_18218	127.5	4.7e-38	N/A	unknown function
UniRef90	UHGV-1390880_43	UniRef90_A0A8D9PGR5	150.0	2.8026e-45	Holin	N/A
eggNOG-mapper	UHGV-1390880_43	411902.CLOBOL_03424	78.2	2.34e-17	N/A	N/A
structural_annotation	UHGV-1390880_43	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1390880_44	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1390880_45	UniRef90_UPI001BBD4500	137.0	3.45e-38	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1390880_45	397290.C810_01411	197.0	0	N/A	N/A
structural_annotation	UHGV-1390880_45	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1390880_46	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1390880_47	476272.RUMHYD_01968	186.0	0	N/A	N/A
structural_annotation	UHGV-1390880_47	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_48	phrog_36112	58.5	9.2e-17	N/A	unknown function
UniRef90	UHGV-1390880_48	UniRef90_A0A8D9PG71	129.0	2.44e-35	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1390880_48	1298920.KI911353_gene2651	117.0	2.13e-31	N/A	N/A
structural_annotation	UHGV-1390880_48	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_50	phrog_1535	128.5	1.4e-40	tail length tape measure protein	tail
UniRef90	UHGV-1390880_50	UniRef90_A0A318EME6	167.0	4.75e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-1390880_50	1298920.KI911353_gene2649	233.0	0	tape measure	N/A
COG	UHGV-1390880_50	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1390880_51	phrog_1194	52.1	0.00000000000001	N/A	unknown function
eggNOG-mapper	UHGV-1390880_51	742733.HMPREF9469_01808	66.6	0.00000000000366	N/A	N/A
Pfam	UHGV-1390880_51	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1390880_51	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_52	phrog_18190	358.2	0	N/A	unknown function
UniRef90	UHGV-1390880_52	UniRef90_R0C2S4	233.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1390880_52	1298920.KI911353_gene2679	204.0	0	N/A	N/A
Pfam	UHGV-1390880_52	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1390880_52	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_53	phrog_17196	143.5	1.60028e-42	kinase	other
UniRef90	UHGV-1390880_53	UniRef90_D4L3U0	327.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1390880_53	483218.BACPEC_01141	210.0	0	N/A	N/A
KOfam	UHGV-1390880_54	K04763	211.8	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1390880_54	phrog_1	168.5	0	integrase	integration and excision
UniRef90	UHGV-1390880_54	UniRef90_A0A3D2MEU6	217.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1390880_54	1423814.HMPREF0549_0615	223.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1390880_54	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1390880_54	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1390880_54	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1390880_54	PF00589,PF13495,MF_01808,NF001399,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1390880_55	K01446	87.9	1.1e-25	PGRP; peptidoglycan recognition protein	N/A
PHROG	UHGV-1390880_55	phrog_1493	170.0	0	endolysin	lysis
UniRef90	UHGV-1390880_55	UniRef90_A0A416AFQ9	367.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1390880_55	553973.CLOHYLEM_04450	214.0	0	Ami_2	N/A
Pfam	UHGV-1390880_55	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1390880_55	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1390880_55	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1390880_55	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1390880_56	phrog_26308	98.1	1.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1390880_56	445973.CLOBAR_01976	112.0	8.27e-28	N/A	N/A
structural_annotation	UHGV-1390880_56	PF03843,MF_01959,TIGR00752,COG3065	N/A	N/A	N/A	N/A