UHGV-1394079 (vOTU-016095)

Viral Genome: UHGV-1394079

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1394079
vOTU ID	vOTU-016095
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0226280
Associated Biosample	SAMN02334098
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	85.86 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9759
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31.09
Jumbo Phage?	No

Genome Content
Length (bps)	32,620
GC Content	37.84%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	47
CDS Density	92%
Average CDS Length (bps)	636.70
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1394079_1	UniRef90_A0A3R6F768	73.9	5.88e-16	XRE family transcriptional regulator	N/A
Pfam	UHGV-1394079_1	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
PHROG	UHGV-1394079_3	phrog_585	126.4	1.4e-37	N/A	unknown function
UniRef90	UHGV-1394079_3	UniRef90_UPI00177B87D0	132.0	1.97e-37	N/A	N/A
eggNOG-mapper	UHGV-1394079_3	1035189.HMPREF9954_1966	126.0	6.86e-36	N/A	N/A
Pfam	UHGV-1394079_3	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-1394079_3	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394079_5	UniRef90_A0A356C6A4	154.0	0	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-1394079_5	318464.IO99_13850	65.5	0.000000000000379	Helix-turn-helix domain	N/A
Pfam	UHGV-1394079_5	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1394079_5	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1394079_5	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_6	phrog_3584	165.6	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1394079_6	642492.Clole_0725	152.0	1.02995e-42	N/A	N/A
structural_annotation	UHGV-1394079_6	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-1394079_7	K03469	70.0	4.7e-20	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1394079_7	phrog_531	64.5	1.7e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394079_7	UniRef90_A0A413YU26	265.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1394079_7	941824.TCEL_01720	77.0	8.47e-16	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1394079_7	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1394079_7	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1394079_7	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394079_8	PF02179,NF011863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394079_9	UniRef90_A0A417WAJ1	140.0	5.24002e-41	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1394079_9	1235800.C819_02254	121.0	8.05e-34	HNH nucleases	N/A
eggNOG-mapper	UHGV-1394079_10	483218.BACPEC_01167	205.0	0	N/A	N/A
PHROG	UHGV-1394079_11	phrog_8470	304.9	0	N/A	unknown function
UniRef90	UHGV-1394079_11	UniRef90_UPI00164C094F	239.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1394079_11	483218.BACPEC_01166	449.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1394079_11	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1394079_11	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_12	phrog_15077	91.8	1.3e-26	N/A	unknown function
UniRef90	UHGV-1394079_12	UniRef90_A0A3A6HZA9	194.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394079_12	1280698.AUJS01000007_gene1019	212.0	0	N/A	N/A
structural_annotation	UHGV-1394079_12	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_17	phrog_2118	105.7	4.4e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394079_17	UniRef90_A0A2U2EKN9	239.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1394079_17	1235799.C818_02668	168.0	0	endonuclease activity	N/A
Pfam	UHGV-1394079_17	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1394079_17	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1394079_21	phrog_625	65.9	2.9e-19	N/A	unknown function
UniRef90	UHGV-1394079_21	UniRef90_A0A413YU40	254.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1394079_21	397290.C810_01502	128.0	2.13e-36	N/A	N/A
structural_annotation	UHGV-1394079_21	PF12961,COG2028	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_22	phrog_36	64.3	2.2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1394079_22	UniRef90_UPI001C529453	67.4	0.0000000000159	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-1394079_22	397290.C810_01391	102.0	1.32e-25	N/A	N/A
structural_annotation	UHGV-1394079_22	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-1394079_23	K07474	152.5	4.2039e-45	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1394079_23	phrog_51	161.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-1394079_23	UniRef90_A0A413YU49	371.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1394079_23	1499683.CCFF01000014_gene3916	149.0	9.94922e-43	Terminase small subunit	N/A
Pfam	UHGV-1394079_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1394079_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1394079_23	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1394079_24	K06909	95.8	5.4e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1394079_24	phrog_2	72.8	7.4e-21	terminase large subunit	head and packaging
UniRef90	UHGV-1394079_24	UniRef90_A0A413YU24	944.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1394079_24	1294142.CINTURNW_1023	526.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1394079_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1394079_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1394079_24	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_25	phrog_533	287.2	0	portal protein	head and packaging
UniRef90	UHGV-1394079_25	UniRef90_A0A413YU90	937.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1394079_25	33035.JPJF01000093_gene2257	544.0	0	N/A	N/A
structural_annotation	UHGV-1394079_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_26	phrog_581	245.7	0	minor head protein	head and packaging
UniRef90	UHGV-1394079_26	UniRef90_A0A413YU28	640.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1394079_26	33035.JPJF01000093_gene2255	439.0	0	N/A	N/A
Pfam	UHGV-1394079_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1394079_26	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1394079_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_28	phrog_2303	130.8	1e-38	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1394079_28	483218.BACPEC_01156	135.0	9.27e-37	N/A	N/A
PHROG	UHGV-1394079_29	phrog_422	264.5	0	major head protein	head and packaging
UniRef90	UHGV-1394079_29	UniRef90_A0A3D5M0U8	504.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1394079_29	663278.Ethha_1589	376.0	0	N/A	N/A
structural_annotation	UHGV-1394079_29	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_30	phrog_541	68.2	1.2e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1394079_30	33035.JPJF01000093_gene2250	146.0	1.079e-43	N/A	N/A
PHROG	UHGV-1394079_31	phrog_8710	124.5	4.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-1394079_31	742740.HMPREF9474_03508	121.0	2.34e-34	N/A	N/A
structural_annotation	UHGV-1394079_31	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394079_32	UniRef90_UPI0018E07468	95.9	1.66e-22	minor capsid protein	N/A
eggNOG-mapper	UHGV-1394079_32	33035.JPJF01000093_gene2248	169.0	0	N/A	N/A
structural_annotation	UHGV-1394079_32	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_33	phrog_2595	84.8	9e-25	head-tail connector protein	connector
UniRef90	UHGV-1394079_33	UniRef90_UPI001D068DAC	137.0	2.49e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-1394079_33	742740.HMPREF9474_03510	129.0	1.3e-36	N/A	N/A
Pfam	UHGV-1394079_33	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1394079_33	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_34	phrog_820	116.2	2e-34	major tail protein	tail
UniRef90	UHGV-1394079_34	UniRef90_T3DDR1	174.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1394079_34	1151292.QEW_2426	174.0	0	N/A	N/A
structural_annotation	UHGV-1394079_34	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_35	phrog_8300	66.3	4.3e-19	N/A	unknown function
structural_annotation	UHGV-1394079_35	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_36	phrog_8355	115.9	8e-35	N/A	unknown function
UniRef90	UHGV-1394079_36	UniRef90_UPI0006BBA9AA	176.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1394079_36	394503.Ccel_3036	120.0	2.14e-33	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1394079_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1394079_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_37	phrog_1535	280.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1394079_37	UniRef90_A0A1C5PIN9	510.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1394079_37	33035.JPJF01000093_gene2243	374.0	0	phage tail tape measure protein	N/A
COG	UHGV-1394079_37	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1394079_37	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_38	phrog_1194	52.3	0.0000000000000084	N/A	unknown function
eggNOG-mapper	UHGV-1394079_38	33035.JPJF01000093_gene2242	79.7	1.32e-17	N/A	N/A
structural_annotation	UHGV-1394079_38	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_39	phrog_6616	163.4	0	tail protein	tail
eggNOG-mapper	UHGV-1394079_39	1121866.AUGK01000003_gene1439	118.0	5.05e-27	Phage minor structural protein	N/A
COG	UHGV-1394079_39	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1394079_40	phrog_6616	164.4	0	tail protein	tail
UniRef90	UHGV-1394079_40	UniRef90_A0A416G658	104.0	2.51e-20	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1394079_40	476272.RUMHYD_01992	187.0	0	N/A	N/A
PHROG	UHGV-1394079_42	phrog_3279	44.7	0.00000000000091	tail fiber protein	tail
eggNOG-mapper	UHGV-1394079_42	476272.RUMHYD_01994	63.2	0.0000000573	N/A	N/A
KOfam	UHGV-1394079_43	K04763	226.6	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1394079_43	phrog_1	182.5	0	integrase	integration and excision
UniRef90	UHGV-1394079_43	UniRef90_UPI0011DD7E30	269.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1394079_43	33035.JPJF01000058_gene3673	262.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1394079_43	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1394079_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1394079_43	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1394079_43	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1394079_45	phrog_1863	55.7	7.7e-17	N/A	unknown function
UniRef90	UHGV-1394079_45	UniRef90_UPI001D0865D2	81.6	1.29e-18	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-1394079_45	1226322.HMPREF1545_04027	80.5	4.86e-19	N/A	N/A
PHROG	UHGV-1394079_46	phrog_1129	74.8	7.9e-22	holin	lysis
UniRef90	UHGV-1394079_46	UniRef90_UPI000E5CE6BF	159.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1394079_46	411461.DORFOR_00721	100.0	7.36e-27	N/A	N/A
Pfam	UHGV-1394079_46	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1394079_46	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1394079_47	K02395	46.7	0.00000000000036	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1394079_47	phrog_3513	55.2	7.2e-16	endolysin	lysis
UniRef90	UHGV-1394079_47	UniRef90_R5ZWS5	588.0	0	Peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-1394079_47	1235801.C822_00706	58.5	0.000000794	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1394079_47	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-1394079_47	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1394079_47	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1394079_47	PF08230,NF004974,COG1705	N/A	N/A	N/A	N/A