UHGV-1403437 (vOTU-145772)

Viral Genome: UHGV-1403437

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1403437
vOTU ID	vOTU-145772
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0188242
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	71.91 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	15
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.956
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	21.71
Jumbo Phage?	No

Genome Content
Length (bps)	25,964
GC Content	28.83%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	47
CDS Density	88%
Average CDS Length (bps)	486.32
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1403437_2	573061.Clocel_2949	69.7	0.0000000000000441	N/A	N/A
structural_annotation	UHGV-1403437_2	PF05171,TIGR04108,COG3721	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_4	phrog_14888	46.1	0.00000000000029	N/A	unknown function
KOfam	UHGV-1403437_5	K18640	119.8	3e-35	parM, stbA; plasmid segregation protein ParM	N/A
PHROG	UHGV-1403437_5	phrog_691	148.6	3.64338e-44	partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403437_5	UniRef90_A0A1C6JGT4	595.0	0	ALP_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1403437_5	1582152.A0A0A8WI45_9CAUD	347.0	0	N/A	N/A
Pfam	UHGV-1403437_5	PF17989	N/A	N/A	Actin like proteins N terminal domain	ALP_N
structural_annotation	UHGV-1403437_5	PF06723,MF_02207,NF010498,COG1077	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_6	phrog_11718	73.8	7.5e-22	N/A	unknown function
UniRef90	UHGV-1403437_6	UniRef90_A0A1C6KNM2	705.0	0	DnaA_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1403437_6	1334046.AYTB01000008_gene2295	86.3	3.28e-16	N/A	N/A
Pfam	UHGV-1403437_6	PF11638	N/A	N/A	DnaA N-terminal domain	DnaA_N
COG	UHGV-1403437_6	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1403437_6	PF11638,PF07261	N/A	N/A	N/A	N/A
KOfam	UHGV-1403437_7	K22300	54.0	0.0000000000000039	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1403437_7	phrog_8	83.1	4.5e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1403437_7	UniRef90_A0A1C6KNQ1	191.0	0	HTH-type transcriptional regulator immR	N/A
eggNOG-mapper	UHGV-1403437_7	1567011.A0A0A7RUJ5_9VIRU	86.7	5.08e-21	protein disulfide oxidoreductase activity	N/A
PADLOC	UHGV-1403437_7	retron_type_VI_hth_cluster2_1	43.6	0.0000000000074	N/A	Retron
Pfam	UHGV-1403437_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1403437_7	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403437_8	UniRef90_A0A1C6JIL2	117.0	1.69e-33	Transcriptional regulator, y4mF family	N/A
Pfam	UHGV-1403437_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1403437_8	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1403437_10	K18830	56.0	7.8e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1403437_10	phrog_2967	45.6	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1403437_10	UniRef90_A0A1C6KPF1	234.0	0	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-1403437_10	1123511.KB905843_gene1000	89.7	1.9e-21	sequence-specific DNA binding	N/A
Pfam	UHGV-1403437_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1403437_10	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1403437_10	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_12	phrog_373	169.6	0	anti-repressor	transcription regulation
UniRef90	UHGV-1403437_12	UniRef90_UPI0018AC2428	304.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1403437_12	1414720.CBYM010000002_gene582	321.0	0	ORF6C domain	N/A
Pfam	UHGV-1403437_12	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-1403437_12	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-1403437_12	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1403437_12	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1403437_12	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403437_14	UniRef90_A0A1C6JI65	85.9	1.73e-21	Spo0E like sporulation regulatory protein	N/A
Pfam	UHGV-1403437_14	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
structural_annotation	UHGV-1403437_14	PF09388	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_17	phrog_5708	283.0	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403437_17	UniRef90_R6GKC9	306.0	0	Replication initiation protein	N/A
eggNOG-mapper	UHGV-1403437_17	1414720.CBYM010000040_gene1625	513.0	0	DnaD domain protein	N/A
COG	UHGV-1403437_17	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1403437_17	PF07261,PF09681,TIGR01446,TIGR01714,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-1403437_18	K02315	219.2	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1403437_18	phrog_50	199.1	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403437_18	UniRef90_UPI0018AB275D	494.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1403437_18	1414720.CBYM010000040_gene1626	526.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-1403437_18	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1403437_18	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1403437_18	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1403437_18	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403437_20	PF11148,MF_01553,COG5503	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_22	phrog_3409	52.7	0.00000000000001	N/A	unknown function
UniRef90	UHGV-1403437_22	UniRef90_UPI0018AB7B74	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-1403437_22	977801.F0PIH7_9VIRU	52.0	0.000000528	N/A	N/A
Pfam	UHGV-1403437_22	PF17400	N/A	N/A	N/A	DUF5406
structural_annotation	UHGV-1403437_22	PF17400	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1403437_24	536227.CcarbDRAFT_2303	52.8	0.0000000381	N/A	N/A
eggNOG-mapper	UHGV-1403437_27	536232.CLM_1636	162.0	0	N/A	N/A
structural_annotation	UHGV-1403437_27	PF17457	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403437_29	UniRef90_UPI0018A8EB18	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-1403437_29	1414720.CBYM010000040_gene1638	293.0	0	N/A	N/A
structural_annotation	UHGV-1403437_29	PF04545,MF_00683,NF008895	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_30	phrog_3928	43.8	0.0000000000034	N/A	unknown function
eggNOG-mapper	UHGV-1403437_30	1414720.CBYM010000040_gene1639	98.2	1.01e-26	N/A	N/A
KOfam	UHGV-1403437_31	K04763	112.9	3.6e-33	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1403437_31	phrog_216	174.3	0	integrase	integration and excision
UniRef90	UHGV-1403437_31	UniRef90_UPI0004B95617	379.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1403437_31	1414720.CBYM010000040_gene1640	378.0	0	Integrase	N/A
Pfam	UHGV-1403437_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1403437_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1403437_31	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_32	phrog_16443	75.2	6.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-1403437_32	935948.KE386495_gene1339	48.9	0.00000236	N/A	N/A
AcrCatalog	UHGV-1403437_32	cluster_1135	35.0	0.0000161	NA	N/A
PHROG	UHGV-1403437_33	phrog_119	70.3	2.6e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403437_33	UniRef90_UPI00189AB2E4	177.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1403437_33	290402.Cbei_0903	150.0	0	HNH nucleases	N/A
Pfam	UHGV-1403437_33	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1403437_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1403437_34	phrog_1066	130.3	6.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-1403437_34	573061.Clocel_2441	164.0	0	N/A	N/A
structural_annotation	UHGV-1403437_34	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_35	phrog_9	388.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1403437_35	UniRef90_UPI000F049817	925.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1403437_35	1582155.A0A0A8WIA5_9CAUD	890.0	0	Phage Terminase	N/A
Pfam	UHGV-1403437_35	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1403437_35	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1403437_35	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_36	phrog_12	192.5	0	portal protein	head and packaging
UniRef90	UHGV-1403437_36	UniRef90_UPI001782823A	725.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1403437_36	318464.IO99_13760	696.0	0	Portal protein	N/A
Pfam	UHGV-1403437_36	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1403437_36	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1403437_36	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1403437_37	K01358	147.3	1.30321e-43	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1403437_37	phrog_94	228.5	0	head maturation protease	head and packaging
UniRef90	UHGV-1403437_37	UniRef90_UPI000C0853A7	435.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1403437_37	1280689.AUJC01000011_gene1520	407.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1403437_37	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1403437_37	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1403437_37	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_38	phrog_10	183.8	0	major head protein	head and packaging
UniRef90	UHGV-1403437_38	UniRef90_UPI00041EF31C	671.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1403437_38	1280689.AUJC01000011_gene1521	671.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1403437_38	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1403437_38	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1403437_38	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1403437_38	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_39	phrog_5223	118.8	1.4e-35	neck protein	connector
UniRef90	UHGV-1403437_39	UniRef90_UPI0003FE9443	146.0	3.36312e-44	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1403437_39	1280689.AUJC01000011_gene1523	146.0	5.60519e-45	N/A	N/A
NCBIFam	UHGV-1403437_39	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1403437_39	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_40	phrog_1951	121.1	3.3e-36	head-tail adaptor	connector
UniRef90	UHGV-1403437_40	UniRef90_UPI000C08A0AB	127.0	3.32e-36	phage head closure protein	N/A
eggNOG-mapper	UHGV-1403437_40	396034.A6XMK0_9CAUD	119.0	6.36e-34	N/A	N/A
NCBIFam	UHGV-1403437_40	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1403437_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_41	phrog_5	48.9	0.00000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-1403437_41	UniRef90_UPI00105617E0	163.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1403437_41	1341151.ASZU01000004_gene257	114.0	2.05e-31	N/A	N/A
structural_annotation	UHGV-1403437_41	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_42	phrog_78	54.6	0.0000000000000021	tail terminator	connector
UniRef90	UHGV-1403437_42	UniRef90_A6XMK2	130.0	2.55e-37	Aminopeptidase	N/A
eggNOG-mapper	UHGV-1403437_42	698758.AXY_02180	131.0	1.49e-38	N/A	N/A
structural_annotation	UHGV-1403437_42	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_43	phrog_88	185.6	0	major tail protein	tail
UniRef90	UHGV-1403437_43	UniRef90_A0A1C6JHQ3	372.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1403437_43	1341151.ASZU01000004_gene255	270.0	0	phage tail protein	N/A
Pfam	UHGV-1403437_43	PF06488	N/A	N/A	Phage tail tube protein	L_lac_phage_MSP
NCBIFam	UHGV-1403437_43	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1403437_43	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_44	phrog_709	151.1	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1403437_44	UniRef90_K6DJ01	147.0	1.58347e-43	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1403437_44	365048.Q0H232_9CAUD	157.0	0	N/A	N/A
structural_annotation	UHGV-1403437_44	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-1403437_45	K03529	42.8	0.0000000000021	smc; chromosome segregation protein	N/A
PHROG	UHGV-1403437_45	phrog_1272	354.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1403437_45	UniRef90_A0A1C6JHC9	1383.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1403437_45	1341151.ASZU01000004_gene253	529.0	0	Tail tape measure protein, TP901 family	N/A
COG	UHGV-1403437_45	COG4487	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403437_45	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_46	phrog_33	71.5	1.9e-20	distal tail protein Dit	tail
UniRef90	UHGV-1403437_46	UniRef90_A0A1C6JHE5	474.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1403437_46	1280689.AUJC01000011_gene1531	276.0	0	phage tail	N/A
Pfam	UHGV-1403437_46	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1403437_46	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1403437_46	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1403437_46	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1403437_47	phrog_1067	239.2	0	minor head protein	head and packaging
UniRef90	UHGV-1403437_47	UniRef90_UPI00187678FC	439.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1403437_47	1280689.AUJC01000011_gene1532	384.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1403437_47	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1403437_47	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1403437_47	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1403437_47	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A