UHGV-1426131 (vOTU-160317)

Viral Genome: UHGV-1426131

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1426131
vOTU ID	vOTU-160317
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0167889
Associated Biosample	SAMN00791909
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	55.78 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9786
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	11.56
Jumbo Phage?	No

Genome Content
Length (bps)	22,899
GC Content	54.75%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	39
CDS Density	92%
Average CDS Length (bps)	538.46
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1426131_2	PF10548	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426131_3	642492.Clole_0961	69.7	0.00000000000000757	N/A	N/A
structural_annotation	UHGV-1426131_3	PF12286	N/A	N/A	N/A	N/A
KOfam	UHGV-1426131_6	K22300	52.8	0.0000000000000091	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1426131_6	UniRef90_A0A1Y4L0A2	132.0	1.98e-37	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1426131_6	748224.HMPREF9436_01444	111.0	8.99e-30	N/A	N/A
Pfam	UHGV-1426131_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1426131_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1426131_6	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1426131_8	K02342	180.8	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-1426131_8	phrog_192	159.3	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426131_8	UniRef90_UPI001897CA3A	332.0	0	exonuclease	N/A
eggNOG-mapper	UHGV-1426131_8	1437608.BBIA_1844	276.0	0	Exonuclease, DNA polymerase III, epsilon subunit family	N/A
PADLOC	UHGV-1426131_8	cd06127	140.9	1.10002e-41	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-1426131_8	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-1426131_8	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-1426131_8	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-1426131_8	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-1426131_8	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_9	phrog_10292	74.2	1e-21	N/A	unknown function
UniRef90	UHGV-1426131_9	UniRef90_A0A416W984	96.7	4.51e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1426131_9	537013.CLOSTMETH_02269	81.6	1.39e-17	TM2 domain	N/A
Pfam	UHGV-1426131_9	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1426131_9	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1426131_9	COG2314	N/A	N/A	N/A	N/A
Pfam	UHGV-1426131_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1426131_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1426131_10	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1426131_11	K06400	377.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1426131_11	phrog_95	364.7	0	integrase	integration and excision
UniRef90	UHGV-1426131_11	UniRef90_UPI00189960B8	502.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1426131_11	1235835.C814_00825	412.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1426131_11	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1426131_11	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1426131_11	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1426131_11	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1426131_11	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426131_12	UniRef90_A0A7M1RTM1	80.9	5.51e-16	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1426131_12	1378168.N510_03079	69.3	0.00000000000547	N/A	N/A
UniRef90	UHGV-1426131_16	UniRef90_UPI00164AED9E	87.8	3.12e-20	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1426131_16	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1426131_16	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426131_17	760568.Desku_0885	59.3	0.0000000267	N/A	N/A
structural_annotation	UHGV-1426131_17	PF14528,PF05204,MF_01420,TIGR00647,COG3780	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426131_18	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_19	phrog_14030	143.4	1.3999e-42	N/A	unknown function
UniRef90	UHGV-1426131_19	UniRef90_R6LL81	246.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1426131_19	1121866.AUGK01000003_gene1444	92.8	6.95e-19	amidase activity	N/A
COG	UHGV-1426131_19	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1426131_20	phrog_13256	67.2	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-1426131_20	1226322.HMPREF1545_00132	73.6	2.37e-16	N/A	N/A
Pfam	UHGV-1426131_23	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1426131_23	PF07484	N/A	N/A	N/A	N/A
Pfam	UHGV-1426131_24	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1426131_24	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_25	phrog_18725	98.5	5.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-1426131_25	693746.OBV_18220	127.0	4.09e-35	N/A	N/A
PHROG	UHGV-1426131_26	phrog_13879	166.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1426131_26	1122919.KB905559_gene1344	160.0	1.48e-40	N/A	N/A
structural_annotation	UHGV-1426131_26	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426131_27	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_28	phrog_6900	267.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1426131_28	1123312.KB904569_gene357	308.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1426131_28	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1426131_28	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_30	phrog_18646	62.4	7.8e-18	N/A	unknown function
UniRef90	UHGV-1426131_30	UniRef90_B6CXF0	72.0	0.0000000000000746	Peptidase-colicin	N/A
PHROG	UHGV-1426131_31	phrog_885	78.5	7.1e-23	major tail protein	tail
UniRef90	UHGV-1426131_31	UniRef90_A0A843J9F0	217.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1426131_31	1504822.CCNO01000012_gene492	247.0	0	N/A	N/A
structural_annotation	UHGV-1426131_31	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426131_32	UniRef90_A0A415JI88	124.0	3.48e-34	N/A	N/A
structural_annotation	UHGV-1426131_32	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_33	phrog_17977	80.4	1.5e-23	N/A	unknown function
UniRef90	UHGV-1426131_33	UniRef90_UPI00141211AB	115.0	7.02e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-1426131_33	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_35	phrog_544	132.4	2.6e-39	major head protein	head and packaging
UniRef90	UHGV-1426131_35	UniRef90_A0A1C6B5R0	593.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1426131_35	1232453.BAIF02000011_gene3359	369.0	0	N/A	N/A
Pfam	UHGV-1426131_35	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1426131_35	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_36	phrog_194	44.3	0.0000000000031	head scaffolding protein	head and packaging
UniRef90	UHGV-1426131_36	UniRef90_A0A6B9SU02	148.0	1.59005e-41	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-1426131_36	476272.RUMHYD_01775	58.5	0.0000000659	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1426131_36	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_37	phrog_5	76.2	6.1e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-1426131_37	UniRef90_UPI0018AA0B5A	184.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1426131_37	1280685.AUKC01000004_gene1630	98.2	1.73e-24	N/A	N/A
Pfam	UHGV-1426131_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1426131_37	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1426131_37	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1426131_38	phrog_595	124.0	1.6e-36	head maturation protease	head and packaging
UniRef90	UHGV-1426131_38	UniRef90_A0A810PSD3	441.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1426131_38	1504822.CCNO01000013_gene286	218.0	0	cell adhesion	N/A
Pfam	UHGV-1426131_38	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1426131_38	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1426131_38	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426131_38	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A