UHGV-1433546 (vOTU-125843)

Viral Genome: UHGV-1433546

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1433546
vOTU ID	vOTU-125843
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0328889
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	HMM-based
CheckV Completeness	56.45 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	10
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9738
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	42.2
Jumbo Phage?	No

Genome Content
Length (bps)	58,455
GC Content	43.30%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	85
CDS Density	91%
Average CDS Length (bps)	626.65
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1433546_1	phrog_19572	196.7	0	N/A	unknown function
UniRef90	UHGV-1433546_1	UniRef90_UPI0019242B3B	379.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433546_1	1121098.HMPREF1534_01077	318.0	0	N/A	N/A
Pfam	UHGV-1433546_1	PF14902	N/A	N/A	N/A	DUF4494
structural_annotation	UHGV-1433546_1	PF14902	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_2	phrog_824	134.3	4.1e-40	N/A	unknown function
UniRef90	UHGV-1433546_2	UniRef90_UPI001920FAA2	194.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1433546_2	411901.BACCAC_01208	179.0	0	N/A	N/A
Pfam	UHGV-1433546_2	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-1433546_4	phrog_2562	104.4	1.2e-30	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433546_4	UniRef90_A0A173VIY8	248.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433546_4	511437.Lbuc_1442	176.0	0	N/A	N/A
Pfam	UHGV-1433546_4	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1433546_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1433546_4	PF14297,TIGR01714	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433546_5	UniRef90_F3PKH6	78.2	2.31e-17	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1433546_5	1268240.ATFI01000007_gene438	85.1	7.04e-21	N/A	N/A
structural_annotation	UHGV-1433546_5	PF00679,MF_00707,NF010078,COG4492	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_6	phrog_9298	359.3	0	radical SAM domain protein	other
UniRef90	UHGV-1433546_6	UniRef90_UPI000E4781A9	511.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1433546_6	762968.HMPREF9441_00539	512.0	0	radical SAM domain protein	N/A
COG	UHGV-1433546_6	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1433546_6	MF_01865,TIGR00089,COG0621	N/A	N/A	N/A	N/A
KOfam	UHGV-1433546_7	K00558	183.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1433546_7	phrog_116	202.9	0	DNA methyltransferase	other
UniRef90	UHGV-1433546_7	UniRef90_A0A413GSJ6	968.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1433546_7	1122971.BAME01000058_gene4475	703.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1433546_7	MTase_II_00164	105.0	6.40001e-41	Type II methyltransferase	RM
Pfam	UHGV-1433546_7	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1433546_7	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1433546_7	PF00145,MF_02100,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_8	phrog_954	226.1	0	DNA methyltransferase	other
UniRef90	UHGV-1433546_8	UniRef90_UPI001E2A5734	315.0	0	class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-1433546_8	1121100.JCM6294_542	259.0	0	Methyltransferase domain	N/A
PADLOC	UHGV-1433546_8	MTase_II_00074	224.5	0	Type II methyltransferase	RM
Pfam	UHGV-1433546_8	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1433546_8	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1433546_8	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
KOfam	UHGV-1433546_9	K00571	64.2	1.5e-18	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1433546_9	phrog_23224	59.1	4.5e-30	DNA methyltransferase	other
UniRef90	UHGV-1433546_9	UniRef90_UPI000E547357	391.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1433546_9	411154.GFO_2469	300.0	0	DNA methylase	N/A
PADLOC	UHGV-1433546_9	MTase_II_00172	117.9	9.4e-35	Type II methyltransferase	RM
Pfam	UHGV-1433546_9	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1433546_9	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1433546_9	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1433546_10	1122971.BAME01000058_gene4471	207.0	0	N/A	N/A
structural_annotation	UHGV-1433546_10	PF18275	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433546_12	UniRef90_A0A6G0G3A8	138.0	6.04002e-41	5'-nucleotidase	N/A
structural_annotation	UHGV-1433546_14	PF16546	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_15	phrog_12005	66.1	5.2e-19	N/A	unknown function
UniRef90	UHGV-1433546_16	UniRef90_A0A0P0G0M6	73.6	0.0000000000000907	DNA_pol3_beta_3 domain-containing protein	N/A
structural_annotation	UHGV-1433546_16	PF02767,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_18	phrog_874	104.3	4.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-1433546_18	762968.HMPREF9441_00541	173.0	0	N/A	N/A
structural_annotation	UHGV-1433546_18	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_21	phrog_8684	72.6	6.6e-23	N/A	unknown function
UniRef90	UHGV-1433546_21	UniRef90_A0A412JFR9	255.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1433546_21	1347393.HG726022_gene3579	79.7	4.06e-17	YopX protein	N/A
Pfam	UHGV-1433546_21	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1433546_21	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433546_24	UniRef90_A0A415IS58	136.0	6.8e-39	LacI family DNA-binding transcriptional regulator	N/A
Pfam	UHGV-1433546_24	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-1433546_24	PF13384,TIGR04381	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_26	phrog_1281	60.8	1.9e-17	N/A	unknown function
UniRef90	UHGV-1433546_26	UniRef90_UPI001106B68D	340.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433546_26	393921.HQ45_06855	82.4	6.83e-18	Phage-associated protein	N/A
Pfam	UHGV-1433546_26	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1433546_26	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_26	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_27	phrog_38431	259.1	0	N/A	unknown function
UniRef90	UHGV-1433546_27	UniRef90_F3QSP5	236.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1433546_27	762982.HMPREF9442_01205	236.0	0	N/A	N/A
PHROG	UHGV-1433546_28	phrog_34053	116.1	4.2e-35	N/A	unknown function
PHROG	UHGV-1433546_29	phrog_28898	256.2	0	N/A	unknown function
UniRef90	UHGV-1433546_29	UniRef90_R5UN07	345.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1433546_29	762982.HMPREF9442_01203	220.0	0	N/A	N/A
structural_annotation	UHGV-1433546_29	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_30	phrog_31654	262.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1433546_30	762968.HMPREF9441_00554	232.0	0	N/A	N/A
PHROG	UHGV-1433546_31	phrog_59	108.4	3.8e-32	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433546_31	UniRef90_A0A174JIX7	194.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1433546_31	1208587.S6CQN3_9CAUD	110.0	9.2e-28	HNH endonuclease	N/A
PADLOC	UHGV-1433546_31	HEase_00016	89.7	9.1e-27	homing endonuclease	RM
Pfam	UHGV-1433546_31	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1433546_31	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1433546_31	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_32	phrog_16490	286.6	0	N/A	unknown function
UniRef90	UHGV-1433546_32	UniRef90_A0A7M1RSH1	233.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-1433546_32	762982.HMPREF9442_01201	350.0	0	N/A	N/A
UniRef90	UHGV-1433546_33	UniRef90_A0A8D9UI10	122.0	2.21e-34	Chromosomal replication initiator protein	N/A
eggNOG-mapper	UHGV-1433546_33	762982.HMPREF9442_01200	107.0	4.54e-29	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-1433546_33	PF08299,NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_34	phrog_35356	134.5	6.4e-40	N/A	unknown function
UniRef90	UHGV-1433546_34	UniRef90_UPI001924A62E	317.0	0	histidine kinase	N/A
eggNOG-mapper	UHGV-1433546_34	411476.BACOVA_03952	118.0	2.74e-31	N/A	N/A
PHROG	UHGV-1433546_35	phrog_315	143.2	1.69978e-42	endolysin	lysis
UniRef90	UHGV-1433546_35	UniRef90_UPI001C012F8F	329.0	0	peptidoglycan domain protein	N/A
eggNOG-mapper	UHGV-1433546_35	357276.EL88_11190	316.0	0	Glycosyl hydrolase 108	N/A
Pfam	UHGV-1433546_35	PF05838	N/A	N/A	Glycosyl hydrolase 108	Glyco_hydro_108
Pfam	UHGV-1433546_35	PF09374	N/A	N/A	Predicted Peptidoglycan domain	PG_binding_3
COG	UHGV-1433546_35	COG3926	N/A	N/A	Lysozyme family protein	N/A
structural_annotation	UHGV-1433546_35	PF05838,PF09374,NF040573,COG3926	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_36	phrog_20732	198.2	0	N/A	unknown function
UniRef90	UHGV-1433546_36	UniRef90_A0A6G7X1I7	72.4	0.000000000000368	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1433546_36	762982.HMPREF9442_01193	228.0	0	N/A	N/A
structural_annotation	UHGV-1433546_36	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_38	phrog_15610	47.6	3.9e-19	protease	other
eggNOG-mapper	UHGV-1433546_38	1123008.KB905705_gene955	70.1	0.000000000000113	N/A	N/A
structural_annotation	UHGV-1433546_39	PF17789,COG3470	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_41	phrog_19239	78.7	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-1433546_41	1122991.BAIZ01000014_gene1262	137.0	3.08e-38	N/A	N/A
PHROG	UHGV-1433546_42	phrog_18810	76.8	2.7e-22	N/A	unknown function
UniRef90	UHGV-1433546_42	UniRef90_UPI0003A9ECB5	84.7	0.0000000000000729	fimbrillin family protein	N/A
eggNOG-mapper	UHGV-1433546_42	1122990.BAJH01000045_gene2791	84.7	0.0000000000000117	N/A	N/A
Pfam	UHGV-1433546_42	PF12810	N/A	N/A	Glycine rich protein	Gly_rich
structural_annotation	UHGV-1433546_42	PF12810	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433546_43	UniRef90_A0A414Z843	303.0	0	BACON domain-containing protein	N/A
eggNOG-mapper	UHGV-1433546_43	411901.BACCAC_01126	280.0	0	Putative binding domain, N-terminal	N/A
Pfam	UHGV-1433546_43	PF13004	N/A	N/A	Putative binding domain, N-terminal	BACON
structural_annotation	UHGV-1433546_43	PF19190,NF011836,COG5492	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1433546_45	449673.BACSTE_02041	108.0	2.4e-21	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-1433546_45	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-1433546_46	phrog_17422	203.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1433546_46	357276.EL88_11220	540.0	0	Phage minor structural protein	N/A
COG	UHGV-1433546_46	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1433546_46	PF14594,PF04862,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_47	phrog_64	81.9	4.7e-24	portal protein	head and packaging
UniRef90	UHGV-1433546_47	UniRef90_A0A5P0X070	513.0	0	Phage portal protein	N/A
Pfam	UHGV-1433546_47	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1433546_47	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_49	phrog_979	114.3	8.1e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1433546_49	UniRef90_A0A415SRG6	820.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1433546_49	485918.Cpin_3879	59.7	0.00000138	Terminase-like family	N/A
COG	UHGV-1433546_49	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1433546_49	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_51	PF21430	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433546_52	UniRef90_A0A8B2AWS5	420.0	0	Major capsid protein	N/A
structural_annotation	UHGV-1433546_52	PF03864,MF_04133,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_54	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_55	phrog_5377	44.8	0.0000000000018	N/A	unknown function
structural_annotation	UHGV-1433546_56	PF05561,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_57	phrog_6767	45.8	0.00000000000078	N/A	unknown function
structural_annotation	UHGV-1433546_57	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_58	PF06894,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_60	phrog_9959	203.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1433546_60	UniRef90_A0A415SRF7	1553.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1433546_60	742727.HMPREF9447_04839	220.0	0	tape measure	N/A
Pfam	UHGV-1433546_60	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-1433546_60	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_60	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_62	PF19824	N/A	N/A	N/A	N/A
KOfam	UHGV-1433546_67	K07741	56.0	0.0000000000000013	antB; anti-repressor protein	N/A
PHROG	UHGV-1433546_67	phrog_130	173.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1433546_67	UniRef90_A0A174JKW6	466.0	0	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-1433546_67	1077285.AGDG01000027_gene1829	238.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1433546_67	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1433546_67	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1433546_67	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1433546_67	PF03374,COG3645,COG3617	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_69	PF13004	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_72	phrog_23063	130.7	3.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-1433546_72	449673.BACSTE_02224	107.0	1.6e-29	N/A	N/A
Pfam	UHGV-1433546_72	PF20482	N/A	N/A	N/A	DUF6722
structural_annotation	UHGV-1433546_74	PF02566	N/A	N/A	N/A	N/A
KOfam	UHGV-1433546_75	K04485	40.4	0.000000000024	radA, sms; DNA repair protein RadA/Sms	N/A
PHROG	UHGV-1433546_75	phrog_239	71.9	2.8e-21	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433546_75	UniRef90_UPI00125CCE12	653.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1433546_75	1121887.AUDK01000018_gene3207	171.0	0	AAA domain	N/A
Pfam	UHGV-1433546_75	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1433546_75	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-1433546_75	PF06745,MF_01498,TIGR00416,COG0467	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433546_77	NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-1433546_80	phrog_1365	43.2	0.0000000000051	N/A	unknown function
structural_annotation	UHGV-1433546_84	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433546_85	UniRef90_D1K5B5	424.0	0	LPD29 domain-containing protein	N/A
eggNOG-mapper	UHGV-1433546_85	1235803.C825_02554	87.4	1.12e-16	N/A	N/A
Pfam	UHGV-1433546_85	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29