UHGV-1445274 (vOTU-080548)

Viral Genome: UHGV-1445274

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1445274
vOTU ID	vOTU-080548
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0250820
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9823
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	21.73
Jumbo Phage?	No

Genome Content
Length (bps)	36,869
GC Content	59.03%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	65
CDS Density	92%
Average CDS Length (bps)	524.59
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1445274_1	phrog_1066	128.4	2.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-1445274_1	1341151.ASZU01000004_gene265	125.0	1.14e-35	N/A	N/A
structural_annotation	UHGV-1445274_1	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_2	phrog_9	369.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1445274_2	UniRef90_A0A1Y3W5R1	775.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1445274_2	1203606.HMPREF1526_00981	731.0	0	Terminase	N/A
Pfam	UHGV-1445274_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1445274_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1445274_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1445274_2	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_3	phrog_12	177.7	0	portal protein	head and packaging
UniRef90	UHGV-1445274_3	UniRef90_C4GAS6	498.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1445274_3	626523.GCWU000342_01027	498.0	0	Portal protein	N/A
Pfam	UHGV-1445274_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1445274_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1445274_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1445274_4	K01358	127.6	1.3e-37	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1445274_4	phrog_94	197.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1445274_4	UniRef90_UPI0018979DC8	205.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1445274_4	1280689.AUJC01000011_gene1520	190.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1445274_4	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1445274_4	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1445274_4	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_5	phrog_10	184.3	0	major head protein	head and packaging
UniRef90	UHGV-1445274_5	UniRef90_UPI00189AE5FE	417.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1445274_5	1280689.AUJC01000011_gene1521	397.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1445274_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1445274_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1445274_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1445274_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_6	phrog_5223	43.8	0.0000000000033	neck protein	connector
UniRef90	UHGV-1445274_6	UniRef90_E6MGY0	58.5	0.00000000355	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1445274_6	887929.HMP0721_1264	58.5	0.000000000596	N/A	N/A
PHROG	UHGV-1445274_7	phrog_1951	75.4	5.3e-22	head-tail adaptor	connector
UniRef90	UHGV-1445274_7	UniRef90_A0A1F8UNT5	65.9	0.00000000000615	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1445274_7	1094508.Tsac_2422	52.4	0.000000225	Phage head-tail joining protein	N/A
Pfam	UHGV-1445274_7	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1445274_7	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1445274_7	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1445274_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445274_8	1487921.DP68_11350	56.6	0.00000000623	N/A	N/A
structural_annotation	UHGV-1445274_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_9	phrog_5	44.7	0.0000000000028	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1445274_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_10	phrog_88	84.5	1.3e-24	major tail protein	tail
UniRef90	UHGV-1445274_10	UniRef90_S0FUN2	114.0	9.42e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1445274_10	1195236.CTER_5106	114.0	1.58e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1445274_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1445274_10	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445274_10	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445274_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_12	phrog_8462	125.2	7.1e-37	tail length tape measure protein	tail
UniRef90	UHGV-1445274_12	UniRef90_UPI00098F054B	218.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1445274_12	1195236.CTER_5104	205.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1445274_12	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1445274_12	TIGR01760,NF033928	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_13	phrog_37549	82.0	2.1e-27	virion structural protein	head and packaging
UniRef90	UHGV-1445274_13	UniRef90_A0A3D0W045	232.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1445274_13	1195236.CTER_5103	125.0	2.42e-27	N/A	N/A
structural_annotation	UHGV-1445274_13	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_14	phrog_26795	136.6	6.40001e-41	N/A	unknown function
eggNOG-mapper	UHGV-1445274_14	1195236.CTER_5102	153.0	2.08e-40	N/A	N/A
structural_annotation	UHGV-1445274_14	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445274_15	PF18614,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445274_17	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_19	phrog_10898	285.8	0	N/A	unknown function
UniRef90	UHGV-1445274_19	UniRef90_A0A7U3NJT3	189.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1445274_19	717606.PaecuDRAFT_2136	66.2	0.000000000935	S-layer homology domain	N/A
COG	UHGV-1445274_19	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1445274_19	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445274_20	PF16408,NF033510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445274_21	1519439.JPJG01000060_gene1892	51.2	0.00000425	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1445274_21	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-1445274_22	742738.HMPREF9460_02534	59.7	0.000000207	N/A	N/A
Pfam	UHGV-1445274_22	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1445274_22	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445274_24	1519439.JPJG01000060_gene1895	82.4	0.00000000000000182	N/A	N/A
structural_annotation	UHGV-1445274_24	PF14600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445274_25	1232443.BAIA02000106_gene3111	49.3	0.00000703	N/A	N/A
PHROG	UHGV-1445274_27	phrog_13256	66.7	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1445274_27	1226322.HMPREF1545_00132	72.8	5.16e-16	N/A	N/A
PHROG	UHGV-1445274_28	phrog_14030	156.1	0	N/A	unknown function
UniRef90	UHGV-1445274_28	UniRef90_R6LL81	269.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1445274_28	1095750.HMPREF9970_2291	142.0	3.51e-38	repeat protein	N/A
COG	UHGV-1445274_28	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
eggNOG-mapper	UHGV-1445274_29	1160721.RBI_I00206	51.6	0.0000000563	N/A	N/A
structural_annotation	UHGV-1445274_29	PF10723	N/A	N/A	N/A	N/A
UniRef90	UHGV-1445274_33	UniRef90_A0A8F0WD75	79.7	0.00000000000000143	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1445274_33	1378168.N510_03079	72.4	0.000000000000401	N/A	N/A
KOfam	UHGV-1445274_34	K06400	249.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1445274_34	phrog_95	263.7	0	integrase	integration and excision
UniRef90	UHGV-1445274_34	UniRef90_G9YSD9	420.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-1445274_34	1121344.JHZO01000001_gene439	407.0	0	resolvase	N/A
Pfam	UHGV-1445274_34	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1445274_34	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1445274_34	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1445274_34	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1445274_34	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1445274_35	K22299	48.5	0.00000000000018	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1445274_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1445274_35	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1445274_35	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_36	phrog_10292	74.4	7.4e-22	N/A	unknown function
UniRef90	UHGV-1445274_36	UniRef90_UPI00101CA94E	97.8	1.83e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1445274_36	1033810.HLPCO_001631	81.6	2.77e-18	TM2 domain	N/A
Pfam	UHGV-1445274_36	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1445274_36	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1445274_36	COG2314	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445274_37	742738.HMPREF9460_02957	53.1	0.00000591	DNA/RNA non-specific endonuclease	N/A
COG	UHGV-1445274_37	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-1445274_37	PF02805	N/A	N/A	N/A	N/A
KOfam	UHGV-1445274_39	K22300	71.4	1.8e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1445274_39	phrog_8	63.4	3.8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1445274_39	UniRef90_A0A2U1BEG8	127.0	1.62e-35	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1445274_39	903814.ELI_1263	115.0	1.27e-31	Helix-turn-helix domain	N/A
Pfam	UHGV-1445274_39	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1445274_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1445274_39	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445274_42	642492.Clole_0961	68.6	0.0000000000000216	N/A	N/A
structural_annotation	UHGV-1445274_42	PF12286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445274_43	PF10548	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_44	phrog_1468	58.2	6.3e-17	transcriptional repressor	transcription regulation
UniRef90	UHGV-1445274_44	UniRef90_A0A1Y3RFS1	54.7	0.0000000283	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-1445274_46	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445274_47	PF05082	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_51	phrog_9298	60.1	2.9e-17	radical SAM domain protein	other
UniRef90	UHGV-1445274_51	UniRef90_A0A841L4D7	314.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-1445274_51	742738.HMPREF9460_03770	287.0	0	radical SAM domain protein	N/A
COG	UHGV-1445274_51	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1445274_51	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_53	phrog_954	199.4	0	DNA methyltransferase	other
UniRef90	UHGV-1445274_53	UniRef90_A0A810Q0N4	294.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1445274_53	1280698.AUJS01000007_gene1028	271.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1445274_53	MTase_II_00074	196.4	0	Type II methyltransferase	RM
Pfam	UHGV-1445274_53	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1445274_53	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1445274_53	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_54	phrog_3136	138.8	8.09951e-42	N/A	unknown function
UniRef90	UHGV-1445274_54	UniRef90_UPI001C26B029	181.0	0	ASCH domain-containing protein	N/A
COG	UHGV-1445274_54	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1445274_54	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_55	phrog_38832	58.4	5.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1445274_55	1232443.BAIA02000078_gene48	117.0	8.56e-32	N/A	N/A
PHROG	UHGV-1445274_57	phrog_190	98.4	7.1e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445274_57	UniRef90_UPI0006C2AC63	127.0	8.72e-35	N/A	N/A
eggNOG-mapper	UHGV-1445274_57	693746.OBV_25250	119.0	2.32e-32	N/A	N/A
Pfam	UHGV-1445274_57	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1445274_57	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_59	phrog_374	68.0	1.8e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445274_59	UniRef90_A0A0R2BB06	65.5	0.0000000000687	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-1445274_59	1423807.BACO01000037_gene1103	65.5	0.0000000000125	N/A	N/A
structural_annotation	UHGV-1445274_62	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_63	phrog_3584	111.7	5.6e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1445274_63	537013.CLOSTMETH_02141	70.5	0.0000000000047	N/A	N/A
structural_annotation	UHGV-1445274_63	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445274_64	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-1445274_64	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1445274_65	phrog_119	48.5	0.00000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445274_65	UniRef90_A0A174XSZ8	125.0	4.14e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1445274_65	1235793.C809_01915	123.0	1.5e-34	HNH endonuclease	N/A
COG	UHGV-1445274_65	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A