UHGV-1447474 (vOTU-118900)

Viral Genome: UHGV-1447474

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1447474
vOTU ID	vOTU-118900
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0180926
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	68.67 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	4
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.968
Viral Hallmark Genes (geNomad)	1
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	19.5
Jumbo Phage?	No

Genome Content
Length (bps)	24,801
GC Content	50.71%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	32
CDS Density	87%
Average CDS Length (bps)	670.69
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1447474_1	phrog_37298	100.7	1.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1447474_1	1122971.BAME01000212_gene6782	150.0	2.99e-37	N/A	N/A
COG	UHGV-1447474_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1447474_2	phrog_21217	75.5	7.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-1447474_2	742767.HMPREF9456_03364	80.9	3.12e-16	N/A	N/A
Pfam	UHGV-1447474_4	PF13385	N/A	N/A	Concanavalin A-like lectin/glucanases superfamily	Laminin_G_3
structural_annotation	UHGV-1447474_4	PF13385,COG3506	N/A	N/A	N/A	N/A
PHROG	UHGV-1447474_6	phrog_38864	352.8	0	N/A	unknown function
structural_annotation	UHGV-1447474_6	PF13185,MF_04104,NF041673,COG2203	N/A	N/A	N/A	N/A
KOfam	UHGV-1447474_8	K01448	93.0	3.4e-27	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1447474_8	phrog_435	127.2	1.7e-37	endolysin	lysis
UniRef90	UHGV-1447474_8	UniRef90_A0A174BQ54	256.0	0	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1447474_8	679935.Alfi_2718	256.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1447474_8	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1447474_8	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1447474_8	PF01520,TIGR02883,COG0860	N/A	N/A	N/A	N/A
UniRef90	UHGV-1447474_9	UniRef90_UPI001CC36B3C	94.7	2.12e-22	N/A	N/A
eggNOG-mapper	UHGV-1447474_9	1122971.BAME01000039_gene3564	57.4	0.0000000199	N/A	N/A
structural_annotation	UHGV-1447474_9	PF11195	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1447474_10	PF20647	N/A	N/A	N/A	N/A
KOfam	UHGV-1447474_11	K04763	59.4	6.4e-17	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1447474_11	phrog_1	66.0	7.2e-19	integrase	integration and excision
UniRef90	UHGV-1447474_11	UniRef90_A0A4Y1WR36	852.0	0	Transposase	N/A
eggNOG-mapper	UHGV-1447474_11	997884.HMPREF1068_03093	416.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1447474_11	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-1447474_11	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-1447474_11	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-1447474_12	phrog_4792	126.0	3.7e-37	anti-repressor	transcription regulation
UniRef90	UHGV-1447474_12	UniRef90_UPI0002DCEF74	366.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-1447474_12	679935.Alfi_0227	231.0	0	PFAM ORF6N domain	N/A
Pfam	UHGV-1447474_12	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-1447474_12	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1447474_12	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1447474_15	K01356	43.6	0.0000000000052	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1447474_15	phrog_4	80.3	3.4e-23	transcriptional repressor	transcription regulation
UniRef90	UHGV-1447474_15	UniRef90_A0A4Y1WPK9	469.0	0	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-1447474_15	1121896.JMLU01000008_gene1790	75.1	0.000000000000145	Peptidase S24-like	N/A
Pfam	UHGV-1447474_15	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1447474_15	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-1447474_15	PF00717,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1447474_16	UniRef90_A0A4P8LL40	60.5	0.00000000233	Trypco2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1447474_16	1236542.BALM01000015_gene1067	69.7	0.000000000000108	N/A	N/A
structural_annotation	UHGV-1447474_16	PF19631	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1447474_18	PF11112	N/A	N/A	N/A	N/A
KOfam	UHGV-1447474_19	K03427	49.8	0.000000000000047	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1447474_19	phrog_1071	183.5	0	DNA methyltransferase	other
UniRef90	UHGV-1447474_19	UniRef90_UPI001BA4768D	210.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1447474_19	411476.BACOVA_03912	163.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
Pfam	UHGV-1447474_19	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1447474_19	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
KOfam	UHGV-1447474_20	K14059	219.5	0	int; integrase	N/A
PHROG	UHGV-1447474_20	phrog_1	171.7	0	integrase	integration and excision
UniRef90	UHGV-1447474_20	UniRef90_A0A1Q6GQP6	267.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1447474_20	1235788.C802_02111	228.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1447474_20	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1447474_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1447474_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1447474_20	PF00589,PF13102,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1447474_23	phrog_129	75.1	1.2e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1447474_23	UniRef90_UPI0002F68456	419.0	0	KilA-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1447474_23	1121100.JCM6294_529	186.0	0	KilA-N domain	N/A
Pfam	UHGV-1447474_23	PF04383	N/A	N/A	KilA-N domain	KilA-N
structural_annotation	UHGV-1447474_23	PF04383,NF033622	N/A	N/A	N/A	N/A
PHROG	UHGV-1447474_25	phrog_14584	82.6	5.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1447474_25	1268240.ATFI01000008_gene2554	92.0	1.05e-21	N/A	N/A
KOfam	UHGV-1447474_26	K10906	42.5	6.3e-18	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-1447474_26	phrog_412	143.6	1.19951e-42	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447474_26	UniRef90_UPI0009DAA602	741.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1447474_26	1268240.ATFI01000008_gene2555	263.0	0	N/A	N/A
Pfam	UHGV-1447474_26	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-1447474_26	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1447474_27	phrog_26490	158.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1447474_27	1268240.ATFI01000008_gene2557	140.0	1.96e-37	N/A	N/A
PHROG	UHGV-1447474_28	phrog_16304	81.5	1.3e-23	N/A	unknown function
UniRef90	UHGV-1447474_28	UniRef90_UPI001898327E	513.0	0	N/A	N/A
eggNOG-mapper	UHGV-1447474_28	33035.JPJF01000071_gene4467	81.6	0.00000000000000232	N/A	N/A
Pfam	UHGV-1447474_28	PF19808	N/A	N/A	N/A	DUF6291
KOfam	UHGV-1447474_29	K21919	90.1	2.3e-26	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-1447474_29	phrog_923	91.6	4.4e-27	N/A	unknown function
UniRef90	UHGV-1447474_29	UniRef90_UPI001898731D	274.0	0	pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-1447474_29	1226322.HMPREF1545_00011	122.0	9.2e-32	Pentapeptide repeats (8 copies)	N/A
Pfam	UHGV-1447474_29	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-1447474_29	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-1447474_29	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1447474_29	PF19062,PF13599,NF000420	N/A	N/A	N/A	N/A
KOfam	UHGV-1447474_30	K00558	164.3	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1447474_30	phrog_363	225.9	0	DNA methyltransferase	other
UniRef90	UHGV-1447474_30	UniRef90_UPI0018AB7658	399.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1447474_30	445970.ALIPUT_01612	392.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1447474_30	MTase_II_00058	143.6	9.89317e-43	Type II methyltransferase	RM
Pfam	UHGV-1447474_30	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1447474_30	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1447474_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1447474_30	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1447474_31	phrog_9298	297.5	0	radical SAM domain protein	other
UniRef90	UHGV-1447474_31	UniRef90_UPI0018749974	535.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1447474_31	445970.ALIPUT_01609	478.0	0	radical SAM domain protein	N/A
COG	UHGV-1447474_31	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1447474_31	MF_01865,NF010916,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1447474_32	phrog_874	99.5	3.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-1447474_32	1236504.HMPREF2132_11385	144.0	1.28999e-40	N/A	N/A
structural_annotation	UHGV-1447474_32	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A