UHGV-1455918 (vOTU-084864)

Viral Genome: UHGV-1455918

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1455918
vOTU ID	vOTU-084864
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0094053
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	3
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9558
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	15.42
Jumbo Phage?	No

Genome Content
Length (bps)	15,193
GC Content	52.33%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	25
CDS Density	85%
Average CDS Length (bps)	516.84
Total tRNA Genes	3
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1455918_1	1226322.HMPREF1545_00716	90.1	2.69e-22	N/A	N/A
KOfam	UHGV-1455918_2	K14059	315.2	0	int; integrase	N/A
PHROG	UHGV-1455918_2	phrog_1	235.0	0	integrase	integration and excision
UniRef90	UHGV-1455918_2	UniRef90_A0A417NDR1	747.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1455918_2	1378168.N510_01891	629.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1455918_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1455918_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1455918_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1455918_2	PF00589,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1455918_3	K14059	126.4	3.9e-37	int; integrase	N/A
PHROG	UHGV-1455918_3	phrog_216	95.9	3.7e-28	integrase	integration and excision
UniRef90	UHGV-1455918_3	UniRef90_A0A1C6F889	167.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1455918_3	877414.ATWA01000005_gene622	124.0	7.65e-35	Phage integrase family	N/A
Pfam	UHGV-1455918_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1455918_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1455918_3	PF00589,MF_01807,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1455918_4	K14059	73.5	4.5e-21	int; integrase	N/A
PHROG	UHGV-1455918_4	phrog_1	64.1	2.6e-18	integrase	integration and excision
UniRef90	UHGV-1455918_4	UniRef90_UPI0019598861	305.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1455918_4	718252.FP2_06900	179.0	0	Phage integrase, N-terminal SAM-like domain	N/A
COG	UHGV-1455918_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1455918_4	MF_01808,NF002331,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-1455918_5	UniRef90_A0A413HZL3	153.0	1.4013e-45	Transposase	N/A
eggNOG-mapper	UHGV-1455918_5	679201.HMPREF9334_01614	128.0	8.5e-37	N/A	N/A
Pfam	UHGV-1455918_5	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
structural_annotation	UHGV-1455918_5	PF18812,COG2929	N/A	N/A	N/A	N/A
KOfam	UHGV-1455918_6	K07729	62.8	6.3e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1455918_6	phrog_3	60.4	8e-17	transcriptional repressor	transcription regulation
UniRef90	UHGV-1455918_6	UniRef90_UPI00068C9AA8	63.2	0.00000000151	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1455918_6	1415774.U728_2385	64.3	0.0000000000985	helix-turn-helix	N/A
PADLOC	UHGV-1455918_6	retron_type_VI_hth_cluster2_1	46.9	0.00000000000058	N/A	Retron
Pfam	UHGV-1455918_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1455918_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1455918_6	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1455918_7	UniRef90_UPI001C02DF0D	101.0	5e-27	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1455918_7	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1455918_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1455918_7	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1455918_8	UniRef90_A0A3A8YWT9	84.0	3.82e-20	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1455918_8	877414.ATWA01000139_gene1368	80.5	1.25e-19	N/A	N/A
KOfam	UHGV-1455918_9	K07505	58.1	1.3e-16	repA; regulatory protein RepA	N/A
PHROG	UHGV-1455918_9	phrog_239	80.7	5.6e-24	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1455918_9	UniRef90_UPI001C123A0E	493.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-1455918_9	370438.PTH_2877	167.0	1.05994e-41	DNA primase	N/A
Pfam	UHGV-1455918_9	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1455918_9	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1455918_9	PF03796,MF_04154,TIGR02237,TIGR01391,COG3598,COG4643	N/A	N/A	N/A	N/A
PHROG	UHGV-1455918_10	phrog_244	53.8	0.0000000000000045	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1455918_10	742738.HMPREF9460_00725	112.0	7.46e-31	N/A	N/A
structural_annotation	UHGV-1455918_10	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
UniRef90	UHGV-1455918_11	UniRef90_A0A3D1LEC5	114.0	1.75e-30	VPS37 C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1455918_11	485916.Dtox_3705	59.7	0.000000000921	N/A	N/A
structural_annotation	UHGV-1455918_11	PF13022	N/A	N/A	N/A	N/A
KOfam	UHGV-1455918_12	K06909	363.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1455918_12	phrog_3717	163.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1455918_12	UniRef90_R9JJE2	520.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1455918_12	397291.C804_01612	520.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1455918_12	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1455918_12	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1455918_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1455918_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1455918_12	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1455918_13	phrog_15404	43.5	0.0000000000048	N/A	unknown function
eggNOG-mapper	UHGV-1455918_13	397291.C804_01613	71.6	0.00000000000000357	N/A	N/A
PHROG	UHGV-1455918_19	phrog_1272	105.0	1e-31	tail length tape measure protein	tail
UniRef90	UHGV-1455918_19	UniRef90_UPI001D098231	180.0	2.38221e-44	peptidoglycan DD-metalloendopeptidase family protein	N/A
eggNOG-mapper	UHGV-1455918_19	1160721.RBI_II00528	233.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1455918_19	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
UniRef90	UHGV-1455918_20	UniRef90_A0A3F3K1J1	100.0	2.95e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1455918_20	394503.Ccel_3173	94.0	1.36e-24	N/A	N/A
Pfam	UHGV-1455918_20	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1455918_20	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1455918_21	phrog_6244	49.0	0.00000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1455918_21	1519439.JPJG01000044_gene958	101.0	4.34e-27	N/A	N/A