UHGV-1471470 (vOTU-035617)

Viral Genome: UHGV-1471470

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1471470
vOTU ID	vOTU-035617
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0215981
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	89.13 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	22
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9812
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	44.87
Jumbo Phage?	No

Genome Content
Length (bps)	30,834
GC Content	45.86%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	53
CDS Density	91%
Average CDS Length (bps)	531.51
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1471470_3	phrog_22683	123.1	6.7e-37	N/A	unknown function
UniRef90	UHGV-1471470_3	UniRef90_UPI001AA0F869	119.0	5.47e-34	N/A	N/A
eggNOG-mapper	UHGV-1471470_3	365659.smi_0408	108.0	3.93e-30	N/A	N/A
AcrCatalog	UHGV-1471470_3	cluster_3962	101.0	6.94e-32	NA	N/A
Pfam	UHGV-1471470_3	PF13783	N/A	N/A	N/A	DUF4177
structural_annotation	UHGV-1471470_3	PF13783,TIGR00285,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1471470_5	K22300	49.4	0.0000000000001	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1471470_5	phrog_8	43.4	0.0000000000017	transcriptional regulator	transcription regulation
UniRef90	UHGV-1471470_5	UniRef90_A0A4R4FGI2	124.0	1.81e-34	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1471470_5	642492.Clole_0718	102.0	2.71e-26	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1471470_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1471470_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1471470_5	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1471470_9	PF20063	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_11	phrog_3584	79.7	3.9e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1471470_11	1235800.C819_00515	152.0	8.12753e-44	N/A	N/A
KOfam	UHGV-1471470_12	K03469	68.4	1.4e-19	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1471470_12	phrog_531	66.6	4e-19	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471470_12	UniRef90_A0A316PA49	148.0	3.6714e-43	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1471470_12	1235800.C819_02257	148.0	8.96831e-44	RNase H	N/A
Pfam	UHGV-1471470_12	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1471470_12	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1471470_12	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1471470_13	483218.BACPEC_01167	117.0	4.68e-31	N/A	N/A
PHROG	UHGV-1471470_14	phrog_4433	68.9	8.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1471470_14	411902.CLOBOL_05698	147.0	2.74935e-42	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1471470_14	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1471470_14	PF12120,NF000318	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_15	phrog_8470	229.4	0	N/A	unknown function
UniRef90	UHGV-1471470_15	UniRef90_UPI001D0E6B3F	607.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1471470_15	411902.CLOBOL_05697	522.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1471470_15	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1471470_15	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_16	phrog_15077	87.8	1.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-1471470_16	1280698.AUJS01000007_gene1019	155.0	1.4e-39	N/A	N/A
structural_annotation	UHGV-1471470_16	PF11300,NF038070	N/A	N/A	N/A	N/A
UniRef90	UHGV-1471470_17	UniRef90_A0A417WAJ1	130.0	3.48e-37	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1471470_17	1235800.C819_02254	94.4	2.44e-23	HNH nucleases	N/A
KOfam	UHGV-1471470_22	K03111	129.2	5.1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1471470_22	phrog_44	134.5	7.29999e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471470_22	UniRef90_R5KD39	212.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1471470_22	357809.Cphy_3773	201.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1471470_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1471470_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1471470_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1471470_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1471470_22	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_23	phrog_20593	67.4	5.1e-20	N/A	unknown function
AcrCatalog	UHGV-1471470_23	cluster_27421	34.7	0.0000194	NA	N/A
PHROG	UHGV-1471470_24	phrog_2118	102.5	4.7e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471470_24	UniRef90_A0A352SFW0	252.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1471470_24	1235799.C818_02668	176.0	0	endonuclease activity	N/A
Pfam	UHGV-1471470_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1471470_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1471470_24	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_25	phrog_8684	120.9	7.2e-36	N/A	unknown function
UniRef90	UHGV-1471470_25	UniRef90_A0A822LMA9	211.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1471470_25	411470.RUMGNA_02199	79.0	1.1e-16	N/A	N/A
Pfam	UHGV-1471470_25	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1471470_25	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1471470_25	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_26	phrog_874	175.8	0	N/A	unknown function
UniRef90	UHGV-1471470_26	UniRef90_UPI0018F57B3A	244.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1471470_26	411468.CLOSCI_00298	179.0	0	N/A	N/A
structural_annotation	UHGV-1471470_26	PF04266,MF_00684,NF003443,COG3097	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_27	phrog_2118	122.0	5e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471470_27	UniRef90_R5ZJF1	224.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1471470_27	610130.Closa_0730	134.0	6.41e-39	HNH endonuclease	N/A
Pfam	UHGV-1471470_27	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1471470_27	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1471470_27	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_29	phrog_599	45.4	0.0000000000017	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-1471470_29	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-1471470_29	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1471470_29	NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_30	phrog_20593	53.8	0.000000000000003	N/A	unknown function
PHROG	UHGV-1471470_31	phrog_36	73.3	4e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1471470_31	UniRef90_UPI001CD68077	108.0	9.63e-28	N/A	N/A
Pfam	UHGV-1471470_31	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1471470_31	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1471470_31	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_32	phrog_338	111.8	7.4e-33	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471470_32	UniRef90_A0A356C4J5	196.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1471470_32	1280698.AUJS01000007_gene1032	187.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-1471470_32	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1471470_32	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1471470_32	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_33	phrog_104	261.3	0	portal protein	head and packaging
UniRef90	UHGV-1471470_33	UniRef90_UPI001A9C29A4	547.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1471470_33	1280698.AUJS01000007_gene1033	543.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1471470_33	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_34	phrog_2494	271.5	0	minor head protein	head and packaging
UniRef90	UHGV-1471470_34	UniRef90_A0A133KD90	175.0	0	ADPrib_exo_Tox domain-containing protein	N/A
eggNOG-mapper	UHGV-1471470_34	1280698.AUJS01000007_gene1034	218.0	0	cell adhesion	N/A
COG	UHGV-1471470_34	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_36	phrog_17688	328.2	0	N/A	unknown function
UniRef90	UHGV-1471470_36	UniRef90_A0A356C4T8	745.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1471470_36	1280698.AUJS01000007_gene1036	647.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1471470_36	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1471470_36	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1471470_36	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_37	phrog_233	66.3	1e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1471470_37	UniRef90_UPI001F1CECE0	95.1	7.55e-22	N/A	N/A
eggNOG-mapper	UHGV-1471470_37	706433.HMPREF9430_01266	75.9	0.00000000000000429	N/A	N/A
Pfam	UHGV-1471470_37	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1471470_37	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_38	phrog_32396	133.2	5.9e-40	N/A	unknown function
UniRef90	UHGV-1471470_38	UniRef90_A0A356C4M5	466.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1471470_38	936375.HMPREF1152_0679	376.0	0	Phage capsid family	N/A
Pfam	UHGV-1471470_38	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1471470_38	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1471470_38	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_40	phrog_137	97.9	7e-29	head-tail adaptor Ad1	connector
UniRef90	UHGV-1471470_40	UniRef90_A0A1C5Y9F2	159.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1471470_40	1280698.AUJS01000007_gene1040	160.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1471470_40	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1471470_40	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_41	phrog_501	83.5	2.3e-24	head closure Hc1	connector
UniRef90	UHGV-1471470_41	UniRef90_G2SN45	134.0	1.8e-38	N/A	N/A
eggNOG-mapper	UHGV-1471470_41	1069534.LRC_07300	134.0	3.02e-39	N/A	N/A
structural_annotation	UHGV-1471470_41	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_42	phrog_387	58.2	1.3e-16	neck protein	connector
eggNOG-mapper	UHGV-1471470_42	936375.HMPREF1152_0683	56.6	0.00000000131	N/A	N/A
PHROG	UHGV-1471470_43	phrog_123	52.0	0.000000000000013	tail terminator	connector
UniRef90	UHGV-1471470_43	UniRef90_A0A2A5RIK6	100.0	2.09e-25	N/A	N/A
eggNOG-mapper	UHGV-1471470_43	1321820.HMPREF1983_00928	109.0	1.13e-29	N/A	N/A
structural_annotation	UHGV-1471470_43	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_44	phrog_117	169.4	0	major tail protein	tail
UniRef90	UHGV-1471470_44	UniRef90_A0A356C4M0	253.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1471470_44	748224.HMPREF9436_00696	227.0	0	domain, Protein	N/A
COG	UHGV-1471470_44	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1471470_44	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_45	phrog_1526	51.5	0.000000000000014	N/A	unknown function
PHROG	UHGV-1471470_46	phrog_1633	150.0	5.60519e-45	N/A	unknown function
UniRef90	UHGV-1471470_46	UniRef90_A0A847L140	132.0	1.08e-37	N/A	N/A
eggNOG-mapper	UHGV-1471470_46	1214184.ALKY01000039_gene910	127.0	4e-36	N/A	N/A
Pfam	UHGV-1471470_46	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1471470_46	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_47	phrog_6900	253.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1471470_47	1321784.HMPREF1987_01082	281.0	0	phage tail tape measure protein	N/A
COG	UHGV-1471470_47	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_48	phrog_20385	91.3	9.1e-27	minor tail protein	tail
UniRef90	UHGV-1471470_48	UniRef90_UPI001C013719	174.0	0	phage baseplate protein	N/A
eggNOG-mapper	UHGV-1471470_48	1469948.JPNB01000001_gene703	184.0	0	N/A	N/A
structural_annotation	UHGV-1471470_48	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_49	phrog_7064	108.7	0	tail protein	tail
eggNOG-mapper	UHGV-1471470_49	1235800.C819_04023	299.0	0	N/A	N/A
structural_annotation	UHGV-1471470_49	PF14594,TIGR03361,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1471470_50	phrog_5811	100.3	1.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-1471470_50	1469948.JPNB01000001_gene705	115.0	2.91e-25	Glycine rich protein	N/A
Pfam	UHGV-1471470_50	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
PHROG	UHGV-1471470_51	phrog_1863	89.6	1.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1471470_51	1203606.HMPREF1526_02027	86.7	1.71e-21	N/A	N/A
PHROG	UHGV-1471470_52	phrog_1129	89.8	1.6e-26	holin	lysis
UniRef90	UHGV-1471470_52	UniRef90_A0A893W7Y5	119.0	5.81e-33	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1471470_52	1232453.BAIF02000013_gene3227	120.0	2.4e-34	N/A	N/A
Pfam	UHGV-1471470_52	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1471470_52	PF16079	N/A	N/A	N/A	N/A
KOfam	UHGV-1471470_53	K01447	119.1	4.8e-35	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1471470_53	phrog_3088	220.5	0	amidase	lysis
UniRef90	UHGV-1471470_53	UniRef90_A0A1G4FJT0	194.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-1471470_53	457396.CSBG_00241	187.0	0	Ami_2	N/A
Pfam	UHGV-1471470_53	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1471470_53	PF13946	N/A	N/A	N/A	DUF4214
COG	UHGV-1471470_53	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A