UHGV-1476602 (vOTU-035694)

Viral Genome: UHGV-1476602

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1476602
vOTU ID	vOTU-035694
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0210952
Associated Biosample	SAMEA2738169
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	81.85 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	26
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9822
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	76.1
Jumbo Phage?	No

Genome Content
Length (bps)	29,914
GC Content	41.50%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	36
CDS Density	94%
Average CDS Length (bps)	783.83
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 81.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1476602_1	1008453.HMPREF9957_0887	87.8	2.33e-19	AAA domain, putative AbiEii toxin, Type IV TA system	N/A
COG	UHGV-1476602_1	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
KOfam	UHGV-1476602_2	K22299	52.9	0.0000000000000084	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1476602_2	phrog_8	88.7	8.7e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-1476602_2	UniRef90_A0A0I9AR32	225.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1476602_2	157924.Q7Y4M0_9CAUD	170.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-1476602_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1476602_2	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_3	phrog_87	68.8	6.1e-20	metallo-protease	other
UniRef90	UHGV-1476602_3	UniRef90_A0A139NUT7	233.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1476602_3	1035189.HMPREF9954_1970	138.0	3.89e-40	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1476602_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1476602_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1476602_3	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_4	phrog_4431	195.2	0	N/A	unknown function
UniRef90	UHGV-1476602_4	UniRef90_A0A4U9XLP4	191.0	0	N/A	N/A
eggNOG-mapper	UHGV-1476602_4	866775.HMPREF9243_0895	60.5	0.0000000167	N/A	N/A
KOfam	UHGV-1476602_5	K14059	176.9	0	int; integrase	N/A
PHROG	UHGV-1476602_5	phrog_1	195.9	0	integrase	integration and excision
UniRef90	UHGV-1476602_5	UniRef90_A0A4D6AVC8	702.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1476602_5	12402.Q708S2_9CAUD	721.0	0	Phage integrase family	N/A
Pfam	UHGV-1476602_5	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1476602_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1476602_5	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1476602_6	K07273	94.2	1.5e-27	acm; lysozyme	N/A
PHROG	UHGV-1476602_6	phrog_6745	213.6	0	endolysin	lysis
UniRef90	UHGV-1476602_6	UniRef90_UPI001459BF86	483.0	0	lysozyme	N/A
eggNOG-mapper	UHGV-1476602_6	1000588.HMPREF9965_1684	490.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1476602_6	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1476602_6	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
Pfam	UHGV-1476602_6	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1476602_6	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1476602_6	PF01183,PF19127,TIGR04035,COG5263,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_7	phrog_297	66.8	3.6e-19	holin	lysis
UniRef90	UHGV-1476602_7	UniRef90_E6KJ35	140.0	5.96953e-42	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1476602_7	888049.HMPREF8578_0250	140.0	1.00053e-42	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1476602_7	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1476602_7	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1476602_7	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476602_7	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_8	phrog_4257	164.7	0	N/A	unknown function
UniRef90	UHGV-1476602_8	UniRef90_F9PZ52	242.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1476602_8	997830.HMPREF1124_0612	244.0	0	N/A	N/A
PHROG	UHGV-1476602_9	phrog_1554	163.5	0	N/A	unknown function
UniRef90	UHGV-1476602_9	UniRef90_A0A371QFW7	332.0	0	N/A	N/A
eggNOG-mapper	UHGV-1476602_9	768726.HMPREF9178_1050	182.0	0	N/A	N/A
Pfam	UHGV-1476602_9	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1476602_9	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_10	phrog_372	604.0	0	tail protein	tail
UniRef90	UHGV-1476602_10	UniRef90_UPI001BD53641	1176.0	0	N/A	N/A
eggNOG-mapper	UHGV-1476602_10	1035189.HMPREF9954_0321	869.0	0	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-1476602_10	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1476602_10	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1476602_10	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
KOfam	UHGV-1476602_11	K23455	60.8	8.5e-18	COL8A; collagen type VIII alpha	N/A
PHROG	UHGV-1476602_11	phrog_588	1207.6	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-1476602_11	UniRef90_A0A1X1H8E5	1633.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1476602_11	1282664.H354_07745	1355.0	0	domain, Protein	N/A
Pfam	UHGV-1476602_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1476602_11	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
NCBIFam	UHGV-1476602_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1476602_11	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-1476602_11	PF14594,PF19081,TIGR01665,TIGR04488,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_12	phrog_202	365.0	0	distal tail protein Dit	tail
UniRef90	UHGV-1476602_12	UniRef90_A0A1X0WME2	991.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1476602_12	1035189.HMPREF9954_0319	597.0	0	N/A	N/A
Pfam	UHGV-1476602_12	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1476602_12	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1476602_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1476602_12	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_13	phrog_1204	418.6	0	tail protein	tail
UniRef90	UHGV-1476602_13	UniRef90_A0A3G8F4R4	704.0	0	Putative membrane protein	N/A
eggNOG-mapper	UHGV-1476602_13	1277892.M1HNU8_9CAUD	557.0	0	N/A	N/A
PHROG	UHGV-1476602_14	phrog_706	185.3	0	N/A	unknown function
UniRef90	UHGV-1476602_14	UniRef90_UPI000F82D21C	337.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1476602_14	646413.C5IUK2_9CAUD	199.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1476602_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1476602_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_15	phrog_1061	76.7	3.6e-22	N/A	unknown function
UniRef90	UHGV-1476602_15	UniRef90_A0A139RN56	104.0	1.04e-26	N/A	N/A
eggNOG-mapper	UHGV-1476602_15	1035189.HMPREF9954_0315	114.0	3.96e-31	N/A	N/A
structural_annotation	UHGV-1476602_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_16	phrog_820	133.0	1.3e-39	major tail protein	tail
UniRef90	UHGV-1476602_16	UniRef90_A0A380K6S6	196.0	0	Tail shaft protein	N/A
eggNOG-mapper	UHGV-1476602_16	646413.C5IUK0_9CAUD	187.0	0	N/A	N/A
structural_annotation	UHGV-1476602_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_17	phrog_913	147.0	4.76441e-44	minor head protein	head and packaging
UniRef90	UHGV-1476602_17	UniRef90_A0A1X1H8I8	266.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1476602_17	646413.C5IUJ9_9CAUD	156.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1476602_17	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1476602_17	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_18	phrog_556	93.3	1.8e-27	minor head protein	head and packaging
UniRef90	UHGV-1476602_18	UniRef90_A0A1X1H883	255.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1476602_18	537874.B3GW08_9CAUD	114.0	4.48e-31	Minor capsid protein	N/A
Pfam	UHGV-1476602_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1476602_18	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_19	phrog_793	101.0	7.7e-30	head-tail adaptor	connector
UniRef90	UHGV-1476602_19	UniRef90_UPI0007693BA3	195.0	0	putative minor capsid protein	N/A
eggNOG-mapper	UHGV-1476602_19	537874.B3GW07_9CAUD	108.0	3.59e-29	Minor capsid protein	N/A
Pfam	UHGV-1476602_19	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1476602_19	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_20	phrog_541	111.3	5.4e-33	head-tail adaptor	connector
UniRef90	UHGV-1476602_20	UniRef90_A0A150NS05	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-1476602_20	646413.C5IUJ7_9CAUD	154.0	0	N/A	N/A
PHROG	UHGV-1476602_22	phrog_2724	79.6	3.4e-23	N/A	unknown function
UniRef90	UHGV-1476602_22	UniRef90_A0A3G8F7I1	141.0	2.05991e-42	Rho_N domain-containing protein	N/A
Pfam	UHGV-1476602_22	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
structural_annotation	UHGV-1476602_22	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_23	phrog_422	343.3	0	major head protein	head and packaging
UniRef90	UHGV-1476602_23	UniRef90_A0A4D6ASP8	517.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-1476602_23	537874.B3GW03_9CAUD	540.0	0	N/A	N/A
structural_annotation	UHGV-1476602_23	PF20911	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_24	phrog_2303	168.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1476602_24	UniRef90_A0A150NS01	283.0	0	N/A	N/A
eggNOG-mapper	UHGV-1476602_24	537874.B3GW02_9CAUD	227.0	0	N/A	N/A
KOfam	UHGV-1476602_26	K11044	42.6	0.0000000000028	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-1476602_26	phrog_581	389.4	0	minor head protein	head and packaging
UniRef90	UHGV-1476602_26	UniRef90_UPI001C1F0E28	1150.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1476602_26	764291.STRUR_2106	529.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1476602_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1476602_26	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-1476602_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476602_26	PF06152,PF03496,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_27	phrog_533	599.4	0	portal protein	head and packaging
UniRef90	UHGV-1476602_27	UniRef90_A0A150NRY8	942.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1476602_27	537874.B3GW00_9CAUD	689.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1476602_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1476602_27	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1476602_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1476602_28	K06909	61.1	1.7e-17	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1476602_28	phrog_29775	388.9	0	N/A	unknown function
UniRef90	UHGV-1476602_28	UniRef90_A0A150NNE4	862.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1476602_28	1214217.ALNF01000014_gene1382	786.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1476602_28	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1476602_28	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1476602_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1476602_28	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_29	phrog_1595	222.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-1476602_29	UniRef90_A0A1X0WMD3	278.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1476602_29	764299.STRIC_2523	226.0	0	DNA packaging	N/A
Pfam	UHGV-1476602_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1476602_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1476602_29	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_30	phrog_36	88.1	1.1e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-1476602_30	UniRef90_A0A139QHN6	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1476602_30	1214217.ALNF01000014_gene1384	97.1	8.58e-24	N/A	N/A
Pfam	UHGV-1476602_30	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1476602_30	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_31	phrog_4455	91.6	4.6e-27	N/A	unknown function
UniRef90	UHGV-1476602_31	UniRef90_A0A4J2CRE4	157.0	0	N/A	N/A
PHROG	UHGV-1476602_32	phrog_17529	117.2	3.7e-35	N/A	unknown function
UniRef90	UHGV-1476602_32	UniRef90_Q7Y4J4	92.8	7.2e-24	Gp30	N/A
eggNOG-mapper	UHGV-1476602_32	585203.SMSK564_1294	59.3	0.000000000119	SPFH domain / Band 7 family	N/A
AcrCatalog	UHGV-1476602_32	cluster_31176	86.7	1.04e-26	NA	N/A
COG	UHGV-1476602_32	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
PHROG	UHGV-1476602_33	phrog_3476	229.7	0	N/A	unknown function
UniRef90	UHGV-1476602_33	UniRef90_E8ZDM2	178.0	0	N/A	N/A
PHROG	UHGV-1476602_34	phrog_98	95.8	3.1e-28	N/A	unknown function
UniRef90	UHGV-1476602_34	UniRef90_A0A1X1IKX5	259.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1476602_34	768486.EHR_02675	69.7	0.000000000000318	YopX protein	N/A
Pfam	UHGV-1476602_34	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1476602_34	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1476602_34	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1476602_35	phrog_1992	151.8	2.8026e-45	MazG-like pyrophosphatase	other
UniRef90	UHGV-1476602_35	UniRef90_A0A0A0YRU9	308.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1476602_35	1297534.CAUJ01000005_gene196	300.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1476602_35	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1476602_35	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1476602_35	PF08761,MF_01020,NF007113,COG4508	N/A	N/A	N/A	N/A
KOfam	UHGV-1476602_36	K00558	64.0	1.6e-18	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1476602_36	phrog_26324	183.2	0	DNA methyltransferase	other
UniRef90	UHGV-1476602_36	UniRef90_UPI00066A25F3	395.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1476602_36	365659.smi_0434	350.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1476602_36	oMTase_00023	82.1	5.5e-33	orphan methyltransferase	RM
Pfam	UHGV-1476602_36	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1476602_36	COG0270	N/A	N/A	DNA-cytosine methylase	N/A