UHGV-1482459 (vOTU-062899)

Viral Genome: UHGV-1482459

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1482459
vOTU ID	vOTU-062899
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0264117
Associated Biosample	SAMN10658113
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.975
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	-5.78
Jumbo Phage?	No

Genome Content
Length (bps)	39,173
GC Content	53.54%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	62
CDS Density	89%
Average CDS Length (bps)	562.07
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1482459_1	K07741	72.0	1.8e-20	antB; anti-repressor protein	N/A
PHROG	UHGV-1482459_1	phrog_63	71.7	1.5e-20	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1482459_1	UniRef90_A0A1C5P786	243.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-1482459_1	1540257.JQMW01000004_gene443	214.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-1482459_1	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1482459_1	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1482459_1	PF03374,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_2	phrog_1758	44.3	0.0000000000025	acetyltransferase	other
UniRef90	UHGV-1482459_2	UniRef90_A0A174ISH4	99.4	4.15e-23	N-acetyltransferase domain-containing protein	N/A
Pfam	UHGV-1482459_2	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
COG	UHGV-1482459_2	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
structural_annotation	UHGV-1482459_2	PF13673,MF_00824,NF010241,COG3153	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482459_4	UniRef90_UPI001D0FAE32	104.0	2.7e-26	protein-export chaperone SecB	N/A
eggNOG-mapper	UHGV-1482459_4	478749.BRYFOR_09873	86.7	7.49e-20	Preprotein translocase subunit SecB	N/A
COG	UHGV-1482459_4	COG1952	N/A	N/A	Preprotein translocase subunit SecB	N/A
structural_annotation	UHGV-1482459_4	PF02556,MF_00821,NF004391,COG1952	N/A	N/A	N/A	N/A
KOfam	UHGV-1482459_5	K01447	116.4	3.4e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1482459_5	phrog_670	151.2	8.40779e-45	endolysin	lysis
UniRef90	UHGV-1482459_5	UniRef90_A0A810QAT9	464.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1482459_5	1226322.HMPREF1545_00070	409.0	0	Ami_2	N/A
Pfam	UHGV-1482459_5	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1482459_5	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1482459_5	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_6	phrog_13256	79.8	1.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-1482459_6	1226322.HMPREF1545_00132	91.3	1.92e-23	N/A	N/A
PHROG	UHGV-1482459_9	phrog_2310	55.5	5.5e-16	N/A	unknown function
KOfam	UHGV-1482459_11	K07486	220.8	0	K07486; transposase	N/A
PHROG	UHGV-1482459_11	phrog_2199	266.8	0	transposase	integration and excision
UniRef90	UHGV-1482459_11	UniRef90_A0A6I2RKK4	765.0	0	IS110 family transposase	N/A
eggNOG-mapper	UHGV-1482459_11	1007096.BAGW01000014_gene1108	625.0	0	Transposase	N/A
Pfam	UHGV-1482459_11	PF01548	N/A	N/A	Transposase	DEDD_Tnp_IS110
Pfam	UHGV-1482459_11	PF02371	N/A	N/A	Transposase IS116/IS110/IS902 family	Transposase_20
NCBIFam	UHGV-1482459_11	NF033542.1	N/A	N/A	IS110 family transposase	N/A
COG	UHGV-1482459_11	COG3547	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-1482459_11	PF01548,PF02371,MF_00651,NF033542,COG3547	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1482459_12	742738.HMPREF9460_01382	63.2	0.0000000905	N/A	N/A
PHROG	UHGV-1482459_13	phrog_156	91.4	5.3e-29	portal protein	head and packaging
eggNOG-mapper	UHGV-1482459_13	693746.OBV_01670	773.0	0	N/A	N/A
structural_annotation	UHGV-1482459_13	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482459_14	UniRef90_A0A4D7ASB8	972.0	0	N/A	N/A
eggNOG-mapper	UHGV-1482459_14	693746.OBV_01680	752.0	0	N/A	N/A
structural_annotation	UHGV-1482459_14	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-1482459_15	K06909	133.6	1.7e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1482459_15	phrog_979	143.4	1.09301e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1482459_15	UniRef90_A0A810QAS9	952.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1482459_15	693746.OBV_01690	682.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1482459_15	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1482459_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1482459_15	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_16	phrog_422	156.1	0	major head protein	head and packaging
UniRef90	UHGV-1482459_16	UniRef90_K1TJJ5	308.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-1482459_16	693746.OBV_01700	446.0	0	N/A	N/A
structural_annotation	UHGV-1482459_16	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482459_18	UniRef90_A0A4D7B2L2	84.7	1.55e-20	Cysteine-rich KTR domain-containing protein	N/A
Pfam	UHGV-1482459_18	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
eggNOG-mapper	UHGV-1482459_19	1519439.JPJG01000011_gene57	147.0	2.77457e-43	N/A	N/A
structural_annotation	UHGV-1482459_19	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_21	phrog_606	42.9	0.0000000000051	terminase small subunit	head and packaging
UniRef90	UHGV-1482459_21	UniRef90_A0A4D7AM67	126.0	1.32e-34	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1482459_21	693746.OBV_01750	129.0	7.32e-37	N/A	N/A
Pfam	UHGV-1482459_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1482459_22	phrog_13890	43.0	0.0000000000054	N/A	unknown function
PHROG	UHGV-1482459_23	phrog_15863	166.3	0	N/A	unknown function
UniRef90	UHGV-1482459_23	UniRef90_A0A810QAR9	338.0	0	Molecular chaperone DnaJ	N/A
eggNOG-mapper	UHGV-1482459_23	693746.OBV_01780	251.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-1482459_23	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-1482459_24	PF17917	N/A	N/A	N/A	N/A
KOfam	UHGV-1482459_25	K14059	194.9	0	int; integrase	N/A
PHROG	UHGV-1482459_25	phrog_1	189.2	0	integrase	integration and excision
UniRef90	UHGV-1482459_25	UniRef90_A0A810QAY4	714.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1482459_25	693746.OBV_01970	374.0	0	Phage integrase family	N/A
Pfam	UHGV-1482459_25	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-1482459_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1482459_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1482459_25	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1482459_26	693746.OBV_19740	67.8	0.0000000000000909	N/A	N/A
KOfam	UHGV-1482459_27	K22300	61.0	2e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1482459_27	phrog_4	106.2	3.9e-31	transcriptional repressor	transcription regulation
UniRef90	UHGV-1482459_27	UniRef90_A0A810QGZ0	429.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1482459_27	693746.OBV_01960	251.0	0	Peptidase S24-like	N/A
Pfam	UHGV-1482459_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1482459_27	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1482459_27	COG0864	N/A	N/A	Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain	N/A
structural_annotation	UHGV-1482459_27	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-1482459_28	K07486	184.9	0	K07486; transposase	N/A
PHROG	UHGV-1482459_28	phrog_2199	224.1	0	transposase	integration and excision
UniRef90	UHGV-1482459_28	UniRef90_A0A1Q6QCP3	790.0	0	IS110 family transposase	N/A
eggNOG-mapper	UHGV-1482459_28	658086.HMPREF0994_06606	685.0	0	Transposase IS116/IS110/IS902 family	N/A
Pfam	UHGV-1482459_28	PF01548	N/A	N/A	Transposase	DEDD_Tnp_IS110
Pfam	UHGV-1482459_28	PF02371	N/A	N/A	Transposase IS116/IS110/IS902 family	Transposase_20
NCBIFam	UHGV-1482459_28	NF033542.1	N/A	N/A	IS110 family transposase	N/A
COG	UHGV-1482459_28	COG3547	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-1482459_28	PF01548,PF02371,MF_00651,NF033542,COG3547	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_31	phrog_8	41.7	0.000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-1482459_31	UniRef90_A0A1Y4HLG9	86.7	4.5e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1482459_31	1211844.CBLM010000016_gene1521	62.4	0.00000000000358	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1482459_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1482459_31	PF08667,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1482459_36	PF12728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1482459_38	PF06003,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_39	phrog_25245	73.4	2.5e-21	N/A	unknown function
UniRef90	UHGV-1482459_39	UniRef90_A0A810Q5U9	299.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-1482459_39	1226322.HMPREF1545_00012	230.0	0	3D domain	N/A
Pfam	UHGV-1482459_39	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1482459_39	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
Pfam	UHGV-1482459_40	PF12773	N/A	N/A	Double zinc ribbon	DZR
PHROG	UHGV-1482459_41	phrog_298	73.9	1.7e-22	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482459_41	UniRef90_UPI00058C5410	88.2	2.22e-18	PD-(D/E)XK nuclease family protein	N/A
COG	UHGV-1482459_41	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1482459_41	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_42	phrog_10048	53.0	6.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-1482459_42	1304880.JAGB01000002_gene2238	108.0	3.69e-26	N/A	N/A
structural_annotation	UHGV-1482459_42	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
KOfam	UHGV-1482459_43	K03111	144.5	1.10002e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1482459_43	phrog_44	146.8	1.20512e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482459_43	UniRef90_A0A810QFR8	264.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1482459_43	1226322.HMPREF1545_04080	216.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1482459_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1482459_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1482459_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1482459_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1482459_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_44	phrog_15768	57.1	3.8e-16	N/A	unknown function
UniRef90	UHGV-1482459_44	UniRef90_A0A1C6J8D5	137.0	1.25e-36	N/A	N/A
eggNOG-mapper	UHGV-1482459_44	1121344.JHZO01000003_gene982	54.3	0.00000399	N/A	N/A
Pfam	UHGV-1482459_44	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1482459_44	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1482459_45	K01160	44.0	0.0000000000056	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1482459_45	phrog_4632	68.2	6.1e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482459_45	UniRef90_A0A7X8IB41	118.0	4.52e-32	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1482459_45	469604.HMPREF0946_00819	57.8	0.00000000503	N/A	N/A
structural_annotation	UHGV-1482459_45	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482459_46	UniRef90_A0A4D7ATA9	78.2	1.51e-16	Helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1482459_46	PF04936,NF033558	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482459_48	UniRef90_UPI001C3A10B1	65.5	0.0000000000168	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1482459_48	1226322.HMPREF1545_00023	50.4	0.00000228	N/A	N/A
PHROG	UHGV-1482459_50	phrog_25732	91.8	4.2e-27	N/A	unknown function
structural_annotation	UHGV-1482459_50	NF011227	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_51	phrog_874	163.9	0	N/A	unknown function
UniRef90	UHGV-1482459_51	UniRef90_A0A4P6LRJ9	158.0	1.4013e-45	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1482459_51	411468.CLOSCI_00298	145.0	5.16995e-41	N/A	N/A
structural_annotation	UHGV-1482459_51	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_52	phrog_37865	128.6	2.2e-38	N/A	unknown function
PHROG	UHGV-1482459_55	phrog_31336	49.9	0.000000000000037	N/A	unknown function
UniRef90	UHGV-1482459_55	UniRef90_A0A6N0LWW3	80.9	1.81e-17	N/A	N/A
eggNOG-mapper	UHGV-1482459_55	1357732.A0A059PYA6_9CAUD	73.6	0.00000000000000223	N/A	N/A
Pfam	UHGV-1482459_55	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
PHROG	UHGV-1482459_56	phrog_8684	53.6	0.0000000000000032	N/A	unknown function
UniRef90	UHGV-1482459_56	UniRef90_A0A1C5WBP0	128.0	2.31e-35	YopX protein	N/A
eggNOG-mapper	UHGV-1482459_56	1226322.HMPREF1545_00036	67.4	0.00000000000255	YopX protein	N/A
structural_annotation	UHGV-1482459_56	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1482459_60	phrog_2717	55.4	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-1482459_60	552398.HMPREF0866_02231	90.1	1.72e-21	N/A	N/A
PHROG	UHGV-1482459_61	phrog_7940	239.3	0	N/A	unknown function
UniRef90	UHGV-1482459_61	UniRef90_UPI001379CFC9	300.0	0	toxin Bro	N/A
eggNOG-mapper	UHGV-1482459_61	546271.Selsp_1341	259.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1482459_61	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1482459_61	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1482459_61	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482459_62	UniRef90_A0A2U1CD16	324.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1482459_62	1519439.JPJG01000011_gene53	909.0	0	N/A	N/A
Pfam	UHGV-1482459_62	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3