UHGV-1488323 (vOTU-022560)

Viral Genome: UHGV-1488323

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1488323
vOTU ID	vOTU-022560
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0144412
Associated Biosample	SAMEA4545321
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	66.62 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9792
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	32.17
Jumbo Phage?	No

Genome Content
Length (bps)	19,798
GC Content	57.17%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	28
CDS Density	92%
Average CDS Length (bps)	653.68
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 66.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1488323_1	UniRef90_A0A316Q6P3	90.9	3.62e-22	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1488323_1	552398.HMPREF0866_04581	55.5	0.00000000424	Putative helix-turn-helix protein, YlxM / p13 like	N/A
Pfam	UHGV-1488323_1	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1488323_1	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
eggNOG-mapper	UHGV-1488323_2	760568.Desku_0913	66.6	0.00000000000171	N/A	N/A
PHROG	UHGV-1488323_3	phrog_190	111.7	6.6e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1488323_3	UniRef90_A0A6N7XIA3	120.0	6.78e-33	N/A	N/A
eggNOG-mapper	UHGV-1488323_3	1236514.BAKL01000051_gene3708	100.0	8.46e-26	N/A	N/A
Pfam	UHGV-1488323_3	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1488323_3	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1488323_6	K07726	41.3	0.000000000026	K07726; putative transcriptional regulator	N/A
Pfam	UHGV-1488323_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1488323_6	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1488323_6	PF13560,NF007257,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1488323_10	1297617.JPJD01000059_gene2640	90.5	2.79e-21	N/A	N/A
KOfam	UHGV-1488323_11	K06909	134.1	1.3e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1488323_11	phrog_10250	198.9	0	N/A	unknown function
UniRef90	UHGV-1488323_11	UniRef90_A0A316PPL4	580.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1488323_11	877414.ATWA01000001_gene906	543.0	0	Terminase-like family	N/A
Pfam	UHGV-1488323_11	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1488323_11	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1488323_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1488323_11	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_12	phrog_64	357.7	0	portal protein	head and packaging
UniRef90	UHGV-1488323_12	UniRef90_A0A316PPQ6	603.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1488323_12	877414.ATWA01000001_gene907	544.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1488323_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1488323_12	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1488323_12	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_13	phrog_115	300.6	0	minor head protein	head and packaging
UniRef90	UHGV-1488323_13	UniRef90_A0A415Z1K6	362.0	0	Phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-1488323_13	60520.HR47_13490	233.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1488323_13	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1488323_13	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1488323_13	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_14	phrog_3711	76.7	2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1488323_14	411469.EUBHAL_01002	63.2	0.00000000000433	N/A	N/A
PHROG	UHGV-1488323_15	phrog_2657	194.5	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1488323_15	UniRef90_A0A845R9C9	331.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1488323_15	411490.ANACAC_00702	300.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-1488323_15	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1488323_15	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1488323_15	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1488323_15	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_16	phrog_172	117.0	1.9e-34	head scaffolding protein	head and packaging
UniRef90	UHGV-1488323_16	UniRef90_A0A316RQZ9	113.0	1.27e-27	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1488323_16	1499683.CCFF01000014_gene3909	98.6	1.45e-22	N/A	N/A
Pfam	UHGV-1488323_16	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1488323_16	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_17	phrog_283	292.3	0	major head protein	head and packaging
UniRef90	UHGV-1488323_17	UniRef90_A0A1I2NUB2	513.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-1488323_17	1499683.CCFF01000014_gene3908	509.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-1488323_17	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-1488323_17	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1488323_19	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_21	phrog_5	49.3	0.00000000000012	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-1488323_21	1235800.C819_00481	68.2	0.00000000000474	N/A	N/A
Pfam	UHGV-1488323_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1488323_21	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_22	phrog_78	43.0	0.0000000000082	tail terminator	connector
structural_annotation	UHGV-1488323_22	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_23	phrog_158	50.0	0.000000000000055	major tail protein	tail
UniRef90	UHGV-1488323_23	UniRef90_R5YR40	181.0	0	Major tail protein putative	N/A
eggNOG-mapper	UHGV-1488323_23	1280692.AUJL01000025_gene2074	73.2	0.0000000000000148	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1488323_23	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1488323_23	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1488323_24	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-1488323_26	K10421	43.4	0.000000000002	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1488323_26	phrog_1535	167.6	0	tail length tape measure protein	tail
COG	UHGV-1488323_26	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1488323_26	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_27	phrog_1194	87.4	1.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1488323_27	877414.ATWA01000001_gene917	144.0	8.78614e-43	N/A	N/A
structural_annotation	UHGV-1488323_27	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1488323_28	phrog_6616	100.3	1.1e-29	tail protein	tail
eggNOG-mapper	UHGV-1488323_28	1211844.CBLM010000023_gene978	90.9	1.74e-16	cellulase activity	N/A
COG	UHGV-1488323_28	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A