UHGV-1489606 (vOTU-157946)

Viral Genome: UHGV-1489606

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1489606
vOTU ID	vOTU-157946
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0190832
Associated Biosample	SAMEA2737977
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	65.33 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	27
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9825
Viral Hallmark Genes (geNomad)	12
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	53.6
Jumbo Phage?	No

Genome Content
Length (bps)	26,390
GC Content	37.11%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	42
CDS Density	96%
Average CDS Length (bps)	603.50
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.33)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1489606_1	phrog_7037	99.7	4.2e-29	tail fiber protein	tail
UniRef90	UHGV-1489606_1	UniRef90_UPI001D0A4391	115.0	2.47e-27	phage tail protein	N/A
eggNOG-mapper	UHGV-1489606_1	546273.VEIDISOL_00731	207.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1489606_1	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1489606_1	PF12571	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_2	phrog_521	68.6	6e-20	tail protein	tail
UniRef90	UHGV-1489606_2	UniRef90_UPI000F8F5AA4	140.0	3.89e-38	N/A	N/A
eggNOG-mapper	UHGV-1489606_2	546273.VEIDISOL_00730	263.0	0	N/A	N/A
COG	UHGV-1489606_2	COG4385	N/A	N/A	Bacteriophage P2-related tail formation protein	N/A
structural_annotation	UHGV-1489606_2	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_3	phrog_6	173.4	0	baseplate protein	tail
UniRef90	UHGV-1489606_3	UniRef90_A0A2S7ZHL0	595.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-1489606_3	546273.VEIDISOL_00729	595.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-1489606_3	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-1489606_3	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1489606_3	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_4	phrog_120	81.0	1e-23	baseplate protein	tail
UniRef90	UHGV-1489606_4	UniRef90_UPI001960E59F	256.0	0	N/A	N/A
eggNOG-mapper	UHGV-1489606_4	546273.VEIDISOL_00728	274.0	0	N/A	N/A
Pfam	UHGV-1489606_4	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-1489606_4	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-1489606_4	PF10934,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_5	phrog_579	96.5	1.8e-28	N/A	unknown function
UniRef90	UHGV-1489606_5	UniRef90_UPI0019614343	240.0	0	N/A	N/A
eggNOG-mapper	UHGV-1489606_5	546273.VEIDISOL_00727	250.0	0	N/A	N/A
Pfam	UHGV-1489606_5	PF10844	N/A	N/A	N/A	DUF2577
structural_annotation	UHGV-1489606_5	PF10844	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_6	phrog_400	303.6	0	tail protein	tail
UniRef90	UHGV-1489606_6	UniRef90_U7UPQ1	414.0	0	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1489606_6	546273.VEIDISOL_00726	969.0	0	PFAM Phage late control gene D protein (GPD)	N/A
COG	UHGV-1489606_6	COG4193	N/A	N/A	Beta- N-acetylglucosaminidase	N/A
structural_annotation	UHGV-1489606_6	PF14594,PF05382,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_7	phrog_380	187.5	0	endolysin	lysis
UniRef90	UHGV-1489606_7	UniRef90_C4FPA1	414.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1489606_7	546273.VEIDISOL_00725	414.0	0	PFAM LysM domain	N/A
COG	UHGV-1489606_7	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-1489606_7	PF21821,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_8	phrog_1068	531.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1489606_8	UniRef90_A0A2S7ZHD8	1075.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1489606_8	546273.VEIDISOL_00724	1056.0	0	tape measure	N/A
Pfam	UHGV-1489606_8	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1489606_8	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1489606_8	COG5281	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1489606_8	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_9	phrog_10943	42.2	0.000000000011	N/A	unknown function
PHROG	UHGV-1489606_10	phrog_389	131.6	3.6e-39	tail protein XkdN-like	tail
UniRef90	UHGV-1489606_10	UniRef90_C4FP98	245.0	0	Phage XkdN-like protein	N/A
eggNOG-mapper	UHGV-1489606_10	546273.VEIDISOL_00722	245.0	0	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-1489606_10	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-1489606_10	PF08890,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_11	phrog_365	169.2	0	tail protein	tail
UniRef90	UHGV-1489606_11	UniRef90_C4FP97	306.0	0	Putative core tail protein	N/A
eggNOG-mapper	UHGV-1489606_11	546273.VEIDISOL_00721	306.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1489606_11	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-1489606_11	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_12	phrog_279	310.0	0	tail sheath	tail
UniRef90	UHGV-1489606_12	UniRef90_A0A496P993	692.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1489606_12	546273.VEIDISOL_00720	848.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-1489606_12	PF17481	N/A	N/A	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
Pfam	UHGV-1489606_12	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-1489606_12	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-1489606_12	PF17482,PF04984,PF17481,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_14	phrog_525	83.2	3.2e-24	N/A	unknown function
UniRef90	UHGV-1489606_14	UniRef90_A0A841R2B4	87.4	3.79e-19	Ribosomal protein L39E	N/A
eggNOG-mapper	UHGV-1489606_14	1567012.A0A0A7RTI2_9VIRU	66.2	0.0000000000069	N/A	N/A
Pfam	UHGV-1489606_14	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-1489606_14	PF20765,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_15	phrog_5	41.6	0.000000000028	tail completion or Neck1 protein	connector
UniRef90	UHGV-1489606_15	UniRef90_A0A496P818	291.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1489606_15	546273.VEIDISOL_01061	94.7	2.22e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1489606_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1489606_15	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_16	phrog_615	90.3	1.6e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-1489606_16	1151292.QEW_1338	63.5	0.0000000000288	N/A	N/A
structural_annotation	UHGV-1489606_16	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1489606_17	1111454.HMPREF1250_0173	62.4	0.000000000083	N/A	N/A
structural_annotation	UHGV-1489606_17	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_19	phrog_544	275.5	0	major head protein	head and packaging
UniRef90	UHGV-1489606_19	UniRef90_A0A496PA36	325.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1489606_19	546273.VEIDISOL_00714	330.0	0	N/A	N/A
NCBIFam	UHGV-1489606_19	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1489606_19	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_20	phrog_194	130.3	1.4e-38	head scaffolding protein	head and packaging
UniRef90	UHGV-1489606_20	UniRef90_UPI000F8DD753	171.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1489606_20	546273.VEIDISOL_00713	220.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1489606_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1489606_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_21	phrog_115	331.6	0	minor head protein	head and packaging
UniRef90	UHGV-1489606_21	UniRef90_A0A2S7ZHE7	546.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1489606_21	546273.VEIDISOL_00712	541.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1489606_21	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1489606_21	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1489606_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1489606_21	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_22	phrog_64	332.9	0	portal protein	head and packaging
UniRef90	UHGV-1489606_22	UniRef90_UPI000F8D9083	578.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1489606_22	546273.VEIDISOL_00711	504.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1489606_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1489606_22	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1489606_23	K06909	391.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1489606_23	phrog_3717	172.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1489606_23	UniRef90_UPI001F0CA075	702.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1489606_23	1123511.KB905868_gene187	528.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1489606_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1489606_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1489606_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1489606_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1489606_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1489606_24	862971.SANR_1402	82.4	0.00000000000000349	N/A	N/A
COG	UHGV-1489606_24	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
KOfam	UHGV-1489606_25	K03497	45.1	0.0000000000017	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1489606_25	phrog_940	358.3	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489606_25	UniRef90_UPI000F8C7A93	397.0	0	N/A	N/A
eggNOG-mapper	UHGV-1489606_25	936154.STP_1604	369.0	0	N/A	N/A
PADLOC	UHGV-1489606_25	MTase_II_00015	85.9	6.3e-25	Type II methyltransferase	RM
Pfam	UHGV-1489606_25	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1489606_25	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1489606_25	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1489606_25	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_27	phrog_36	48.8	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1489606_27	UniRef90_D1YMC4	87.4	4.71e-19	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-1489606_27	706434.HMPREF9429_00383	50.4	0.00000935	N/A	N/A
structural_annotation	UHGV-1489606_27	PF07374,TIGR02984	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_29	phrog_21026	83.3	1e-24	N/A	unknown function
PHROG	UHGV-1489606_30	phrog_419	103.4	2.6e-30	N/A	unknown function
UniRef90	UHGV-1489606_30	UniRef90_A0A3F3A3T2	91.3	1.81e-22	Gp9	N/A
eggNOG-mapper	UHGV-1489606_30	1123263.AUKY01000015_gene1587	94.0	2.53e-24	N/A	N/A
structural_annotation	UHGV-1489606_30	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_32	phrog_774	76.8	3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1489606_32	1435051.BMOU_0242	60.8	0.000000000578	Helix-turn-helix domain	N/A
COG	UHGV-1489606_32	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
KOfam	UHGV-1489606_33	K01520	160.8	0	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1489606_33	phrog_135	156.3	0	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489606_33	UniRef90_UPI001D0616FF	268.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1489606_33	66692.ABC2847	128.0	7.18e-36	deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
Pfam	UHGV-1489606_33	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1489606_33	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1489606_33	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1489606_33	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_34	phrog_244	72.2	8.5e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489606_34	UniRef90_A0A841R0Q1	115.0	5.56e-31	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1489606_34	1200557.JHWV01000001_gene280	119.0	3.69e-33	N/A	N/A
structural_annotation	UHGV-1489606_34	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1489606_35	K00571	121.3	1e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1489606_35	phrog_67	100.4	1.1e-30	DNA methyltransferase	other
UniRef90	UHGV-1489606_35	UniRef90_UPI00196047F8	511.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1489606_35	749222.Nitsa_1817	386.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1489606_35	MTase_II_00157	100.7	3.2e-30	Type II methyltransferase	RM
Pfam	UHGV-1489606_35	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1489606_35	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1489606_35	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_36	phrog_2776	46.4	0.00000000000049	N/A	unknown function
UniRef90	UHGV-1489606_36	UniRef90_A0A2S7ZCT0	159.0	0	DNA repair protein MmcB-related protein	N/A
structural_annotation	UHGV-1489606_36	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_37	phrog_2882	300.1	0	DNA methyltransferase	other
UniRef90	UHGV-1489606_37	UniRef90_UPI000E75FDEB	486.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1489606_37	565653.EGBG_01954	277.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-1489606_37	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1489606_37	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1489606_37	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1489606_39	PF16857,MF_00273	N/A	N/A	N/A	N/A
PHROG	UHGV-1489606_40	phrog_954	225.6	0	DNA methyltransferase	other
UniRef90	UHGV-1489606_40	UniRef90_A0A239ZA70	288.0	0	Methyltransferase domain	N/A
eggNOG-mapper	UHGV-1489606_40	1401067.HMPREF0872_03435	273.0	0	methyltransferase	N/A
PADLOC	UHGV-1489606_40	MTase_II_00074	211.0	0	Type II methyltransferase	RM
Pfam	UHGV-1489606_40	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1489606_40	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-1489606_40	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1489606_41	PF11305,MF_01360	N/A	N/A	N/A	N/A
KOfam	UHGV-1489606_42	K03111	100.3	3.2e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1489606_42	phrog_44	84.8	1.5e-24	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1489606_42	UniRef90_UPI001D069DF3	172.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1489606_42	936589.HMPREF1521_1228	157.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1489606_42	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1489606_42	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1489606_42	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1489606_42	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A