UHGV-1505389 (vOTU-034937)

Viral Genome: UHGV-1505389

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1505389
vOTU ID	vOTU-034937
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0229886
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	86.5 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9786
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	45.55
Jumbo Phage?	No

Genome Content
Length (bps)	33,294
GC Content	33.08%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	39
CDS Density	88%
Average CDS Length (bps)	752.85
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1505389_1	K14059	98.4	1.2e-28	int; integrase	N/A
PHROG	UHGV-1505389_1	phrog_1	126.7	2.3e-37	integrase	integration and excision
UniRef90	UHGV-1505389_1	UniRef90_A0A1G5CL52	533.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-1505389_1	693746.OBV_41260	170.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1505389_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1505389_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1505389_1	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_3	phrog_1914	128.2	5.5e-38	N/A	unknown function
UniRef90	UHGV-1505389_3	UniRef90_A0A355V1W2	207.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1505389_3	1160721.RBI_I01604	198.0	0	N/A	N/A
Pfam	UHGV-1505389_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1505389_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1505389_3	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1505389_4	K22300	54.7	0.0000000000000021	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1505389_4	phrog_8	76.0	7e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1505389_4	UniRef90_UPI0019676706	76.6	0.0000000000000106	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1505389_4	246199.CUS_5582	80.1	1.34e-16	sequence-specific DNA binding	N/A
Pfam	UHGV-1505389_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1505389_4	COG1426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505389_4	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_5	phrog_8	52.5	0.00000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-1505389_5	UniRef90_R6CEZ8	103.0	2.24e-27	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1505389_5	1211844.CBLM010000016_gene1521	66.6	0.000000000000108	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1505389_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1505389_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1505389_6	742738.HMPREF9460_00848	53.9	0.0000000667	N/A	N/A
PHROG	UHGV-1505389_12	phrog_190	125.7	3.4e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1505389_12	UniRef90_UPI001C0F5697	120.0	5.9e-33	N/A	N/A
eggNOG-mapper	UHGV-1505389_12	553220.CAMGR0001_2115	95.9	4.54e-24	N/A	N/A
Pfam	UHGV-1505389_12	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1505389_12	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_13	phrog_24518	56.0	5.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-1505389_13	1519439.JPJG01000077_gene922	62.4	0.00000000324	N/A	N/A
KOfam	UHGV-1505389_14	K03497	138.6	4.10006e-41	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1505389_14	phrog_6218	230.5	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1505389_14	UniRef90_A0A2V2FQV6	224.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1505389_14	1160721.RBI_I01596	220.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1505389_14	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-1505389_14	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-1505389_14	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1505389_14	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_15	phrog_3584	257.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1505389_15	UniRef90_A0A4P8IFK4	217.0	0	N/A	N/A
eggNOG-mapper	UHGV-1505389_15	1321814.HMPREF9089_00921	238.0	0	N/A	N/A
structural_annotation	UHGV-1505389_15	PF21578	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505389_16	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_17	phrog_309	140.6	6.39973e-42	terminase small subunit	head and packaging
UniRef90	UHGV-1505389_17	UniRef90_UPI000AC737F1	152.0	1.82169e-44	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1505389_17	1567014.A0A0A7RTX1_9VIRU	140.0	3.36001e-40	N/A	N/A
Pfam	UHGV-1505389_17	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
structural_annotation	UHGV-1505389_17	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_18	phrog_4581	114.5	7.7e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1505389_18	UniRef90_R6NCD1	300.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1505389_18	293826.Amet_2409	186.0	0	HNH endonuclease	N/A
Pfam	UHGV-1505389_18	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1505389_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1505389_18	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_20	phrog_9	279.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1505389_20	UniRef90_R7FEF5	931.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1505389_20	642492.Clole_1855	556.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1505389_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1505389_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1505389_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1505389_20	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_21	phrog_12	166.0	0	portal protein	head and packaging
UniRef90	UHGV-1505389_21	UniRef90_UPI00156EE181	455.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1505389_21	1211817.CCAT010000007_gene1039	353.0	0	Portal protein	N/A
Pfam	UHGV-1505389_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1505389_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1505389_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1505389_22	K06904	118.8	5.9e-35	N/A	N/A
PHROG	UHGV-1505389_22	phrog_80	151.0	9.80909e-45	head maturation protease	head and packaging
UniRef90	UHGV-1505389_22	UniRef90_R5W1K4	239.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-1505389_22	1123263.AUKY01000046_gene468	207.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1505389_22	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1505389_22	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1505389_22	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1505389_22	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_23	phrog_10	139.9	1.40004e-41	major head protein	head and packaging
UniRef90	UHGV-1505389_23	UniRef90_R6NN39	490.0	0	Phage major capsid protein HK97 family	N/A
eggNOG-mapper	UHGV-1505389_23	411470.RUMGNA_02065	438.0	0	N/A	N/A
Pfam	UHGV-1505389_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1505389_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1505389_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1505389_23	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1505389_24	UniRef90_UPI001E432EFF	97.4	1.35e-24	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1505389_24	768704.Desmer_4461	60.8	0.0000000000523	N/A	N/A
Pfam	UHGV-1505389_24	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1505389_24	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-1505389_25	UniRef90_R6Z5T8	125.0	5.7e-35	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-1505389_25	1536774.H70357_10645	59.7	0.000000000522	N/A	N/A
Pfam	UHGV-1505389_25	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1505389_25	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1505389_25	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505389_26	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505389_27	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_28	phrog_88	103.9	1.3e-30	major tail protein	tail
UniRef90	UHGV-1505389_28	UniRef90_A0A843GGC8	136.0	9.82e-36	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1505389_28	1120971.AUCA01000037_gene2904	79.0	0.00000000000000159	Phage tail tube protein	N/A
NCBIFam	UHGV-1505389_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1505389_28	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-1505389_30	K20283	45.1	0.00000000000018	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-1505389_30	phrog_5218	268.4	0	N/A	unknown function
UniRef90	UHGV-1505389_30	UniRef90_UPI001EDCC813	535.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1505389_30	908340.HMPREF9406_2570	283.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-1505389_30	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1505389_30	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1505389_30	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_31	phrog_33	55.8	0.0000000000000012	distal tail protein Dit	tail
UniRef90	UHGV-1505389_31	UniRef90_UPI001D088A46	185.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1505389_31	665956.HMPREF1032_00687	111.0	5.02e-26	Phage tail protein	N/A
Pfam	UHGV-1505389_31	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
structural_annotation	UHGV-1505389_31	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_32	phrog_538	198.2	0	minor tail protein	tail
UniRef90	UHGV-1505389_32	UniRef90_UPI001D076D06	164.0	7.56701e-44	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1505389_32	428125.CLOLEP_01424	132.0	2.23e-32	N/A	N/A
Pfam	UHGV-1505389_32	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1505389_32	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_33	phrog_1220	220.6	0	head protein	head and packaging
UniRef90	UHGV-1505389_33	UniRef90_A0A7M4B3C1	98.2	8.77e-19	Phage structural protein	N/A
eggNOG-mapper	UHGV-1505389_33	588581.Cpap_1262	152.0	8.27e-39	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-1505389_37	phrog_199	88.6	6.5e-26	holin	lysis
UniRef90	UHGV-1505389_37	UniRef90_A0A348ZBJ4	277.0	0	Holin	N/A
eggNOG-mapper	UHGV-1505389_37	411459.RUMOBE_01714	208.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1505389_37	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1505389_37	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1505389_37	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1505389_37	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1505389_38	K01447	117.5	1.6e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1505389_38	phrog_670	122.4	4.8e-36	endolysin	lysis
UniRef90	UHGV-1505389_38	UniRef90_A0A348ZBJ3	561.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1505389_38	1232453.BAIF02000013_gene3229	219.0	0	Ami_2	N/A
Pfam	UHGV-1505389_38	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1505389_38	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
structural_annotation	UHGV-1505389_38	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1505389_39	phrog_2104	42.1	0.000000000014	N/A	unknown function
UniRef90	UHGV-1505389_39	UniRef90_A0A412ULX9	85.9	2.7e-20	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1505389_39	411459.RUMOBE_01706	55.8	0.00000000257	N/A	N/A
Pfam	UHGV-1505389_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3