UHGV-1511032 (vOTU-025609)

Viral Genome: UHGV-1511032

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1511032
vOTU ID	vOTU-025609
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0182578
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	59.26 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9706
Viral Hallmark Genes (geNomad)	13
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	42.32
Jumbo Phage?	No

Genome Content
Length (bps)	23,978
GC Content	51.39%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	40
CDS Density	91%
Average CDS Length (bps)	545.70
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1511032_2	UniRef90_UPI00037006A4	68.9	0.00000000000288	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1511032_2	1123008.KB905694_gene1816	68.9	0.000000000000482	N/A	N/A
structural_annotation	UHGV-1511032_2	PF12844,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_6	phrog_11227	131.5	3.3e-39	protease	other
UniRef90	UHGV-1511032_6	UniRef90_A0A841MSP4	141.0	8.16999e-41	Regulator of protease activity HflC (Stomatin/prohibitin superfamily)	N/A
eggNOG-mapper	UHGV-1511032_6	679935.Alfi_0795	148.0	2.24208e-44	N/A	N/A
PHROG	UHGV-1511032_7	phrog_415	89.9	3e-26	polynucleotide kinase	other
UniRef90	UHGV-1511032_7	UniRef90_A0A350MNV4	101.0	1.11e-24	3'-phosphatase (Fragment)	N/A
eggNOG-mapper	UHGV-1511032_7	1123320.KB889561_gene4742	70.1	0.000000000000479	phosphatidylinositol transporter activity	N/A
COG	UHGV-1511032_7	COG5083	N/A	N/A	Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance	N/A
structural_annotation	UHGV-1511032_7	PF08235,MF_01250,TIGR01680,COG2503	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_9	phrog_2514	49.6	0.000000000000036	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1511032_9	476272.RUMHYD_02833	55.8	0.00000251	Transcriptional regulator	N/A
COG	UHGV-1511032_9	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1511032_9	PF04703,NF033788,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_10	phrog_190	74.1	1.8e-21	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511032_10	UniRef90_R7JQP2	157.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1511032_10	1280689.AUJC01000003_gene945	69.3	0.00000000000052	N/A	N/A
Pfam	UHGV-1511032_10	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1511032_10	PF06356,NF033179	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_11	phrog_35807	200.2	0	N/A	unknown function
UniRef90	UHGV-1511032_11	UniRef90_K1UIS3	235.0	0	RNA polymerase beta subunit (Fragment)	N/A
eggNOG-mapper	UHGV-1511032_11	1121286.AUMT01000001_gene27	163.0	0	RNA polymerase activity	N/A
COG	UHGV-1511032_11	COG0085	N/A	N/A	DNA-directed RNA polymerase, beta subunit/140 kD subunit	N/A
structural_annotation	UHGV-1511032_11	PF14902	N/A	N/A	N/A	N/A
KOfam	UHGV-1511032_13	K00571	116.3	3.2e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1511032_13	phrog_23224	179.3	0	DNA methyltransferase	other
UniRef90	UHGV-1511032_13	UniRef90_UPI001B39CDDA	483.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1511032_13	1123304.AQYA01000037_gene207	322.0	0	DNA methylase	N/A
PADLOC	UHGV-1511032_13	MTase_II_00172	106.3	5.8e-33	Type II methyltransferase	RM
Pfam	UHGV-1511032_13	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1511032_13	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1511032_13	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1511032_14	K00558	154.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1511032_14	phrog_363	218.0	0	DNA methyltransferase	other
UniRef90	UHGV-1511032_14	UniRef90_B0MWV7	459.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1511032_14	445970.ALIPUT_01612	459.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1511032_14	MTase_II_00058	141.7	6.19374e-43	Type II methyltransferase	RM
Pfam	UHGV-1511032_14	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1511032_14	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1511032_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1511032_14	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_15	phrog_9298	122.6	3.4e-36	radical SAM domain protein	other
UniRef90	UHGV-1511032_15	UniRef90_A0A658JBA8	108.0	8.43e-28	Radical SAM protein (Fragment)	N/A
eggNOG-mapper	UHGV-1511032_15	1203611.KB894549_gene2264	174.0	0	radical SAM domain protein	N/A
COG	UHGV-1511032_15	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
PHROG	UHGV-1511032_16	phrog_9298	95.1	8.5e-28	radical SAM domain protein	other
UniRef90	UHGV-1511032_16	UniRef90_UPI0018749974	239.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1511032_16	445970.ALIPUT_01609	213.0	0	radical SAM domain protein	N/A
COG	UHGV-1511032_16	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1511032_16	TIGR02495	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_19	phrog_8684	83.8	2.6e-26	N/A	unknown function
UniRef90	UHGV-1511032_19	UniRef90_UPI0011071E51	104.0	3.37e-26	YopX family protein	N/A
eggNOG-mapper	UHGV-1511032_19	445970.ALIPUT_01614	89.4	2.49e-21	YopX protein	N/A
Pfam	UHGV-1511032_19	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1511032_19	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1511032_19	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1511032_20	742725.HMPREF9450_02087	95.5	3.59e-23	N/A	N/A
PHROG	UHGV-1511032_22	phrog_874	78.7	8.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1511032_22	762968.HMPREF9441_00541	162.0	0	N/A	N/A
structural_annotation	UHGV-1511032_22	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_27	phrog_144	63.7	3.6e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511032_27	UniRef90_A0A4S3HA29	142.0	3.00999e-42	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1511032_27	1268240.ATFI01000007_gene425	135.0	5.63e-40	HNH endonuclease	N/A
Pfam	UHGV-1511032_27	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1511032_27	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1511032_28	phrog_83	79.8	4.2e-23	terminase small subunit	head and packaging
UniRef90	UHGV-1511032_28	UniRef90_A0A412GGR3	129.0	3.47e-36	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-1511032_28	1268240.ATFI01000007_gene422	88.2	1.1e-20	Phage terminase, small subunit	N/A
Pfam	UHGV-1511032_28	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-1511032_28	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-1511032_28	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1511032_28	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_29	phrog_9	390.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1511032_29	UniRef90_A0A496C8I2	841.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1511032_29	1268240.ATFI01000007_gene421	815.0	0	Phage Terminase	N/A
Pfam	UHGV-1511032_29	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1511032_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1511032_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1511032_29	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_30	phrog_12	288.4	0	portal protein	head and packaging
UniRef90	UHGV-1511032_30	UniRef90_E2N7Z9	566.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1511032_30	1268240.ATFI01000007_gene420	555.0	0	Phage portal protein	N/A
Pfam	UHGV-1511032_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1511032_30	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1511032_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1511032_30	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1511032_31	K06904	118.7	6.5e-35	N/A	N/A
PHROG	UHGV-1511032_31	phrog_80	141.6	7.40026e-42	head maturation protease	head and packaging
UniRef90	UHGV-1511032_31	UniRef90_E5CGA0	232.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1511032_31	1268240.ATFI01000007_gene419	228.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1511032_31	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1511032_31	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1511032_31	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1511032_31	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_32	phrog_617	176.2	0	major head protein	head and packaging
UniRef90	UHGV-1511032_32	UniRef90_A0A3E5G6Y5	516.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1511032_32	1268240.ATFI01000007_gene418	462.0	0	Phage capsid family	N/A
Pfam	UHGV-1511032_32	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1511032_32	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1511032_32	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1511032_32	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_33	phrog_40	65.1	9e-19	head-tail adaptor Ad1	connector
UniRef90	UHGV-1511032_33	UniRef90_A0A496CA88	124.0	5.65e-35	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1511032_33	1347393.HG726026_gene2615	114.0	1.22e-31	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1511032_33	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1511032_33	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1511032_33	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-1511032_34	UniRef90_UPI0004AEE794	102.0	2.91e-26	phage head closure protein	N/A
eggNOG-mapper	UHGV-1511032_34	1347393.HG726026_gene2616	102.0	4.87e-27	Phage head-tail joining protein	N/A
Pfam	UHGV-1511032_34	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1511032_34	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1511032_35	UniRef90_E2N7Z2	130.0	4.14e-36	Putative phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1511032_35	1268240.ATFI01000007_gene415	127.0	1.13e-35	N/A	N/A
structural_annotation	UHGV-1511032_35	PF20039,TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-1511032_36	UniRef90_UPI001CCBF085	132.0	1.26e-37	N/A	N/A
eggNOG-mapper	UHGV-1511032_36	1347393.HG726026_gene2618	142.0	4.71957e-42	N/A	N/A
Pfam	UHGV-1511032_36	PF11367	N/A	N/A	N/A	DUF3168
structural_annotation	UHGV-1511032_36	PF11367,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1511032_37	phrog_1407	70.3	2e-20	major tail protein	tail
UniRef90	UHGV-1511032_37	UniRef90_UPI001913A485	196.0	0	phage tail tube protein	N/A
eggNOG-mapper	UHGV-1511032_37	1268240.ATFI01000007_gene413	93.6	6.25e-22	Phage tail tube protein	N/A
Pfam	UHGV-1511032_37	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-1511032_37	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1511032_38	1268240.ATFI01000007_gene412	119.0	1.9e-30	N/A	N/A
PHROG	UHGV-1511032_39	phrog_2335	77.7	8.9e-23	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1511032_39	1347393.HG726026_gene2622	195.0	0	tape measure	N/A
Pfam	UHGV-1511032_39	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-1511032_39	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
UniRef90	UHGV-1511032_40	UniRef90_UPI00052C84E5	116.0	1.89e-23	tape measure protein	N/A
eggNOG-mapper	UHGV-1511032_40	1347393.HG726026_gene2622	100.0	5.6e-19	tape measure	N/A
COG	UHGV-1511032_40	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A