UHGV-1513680 (vOTU-036235)

Viral Genome: UHGV-1513680

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1513680
vOTU ID	vOTU-036235
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0326853
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	85.64 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	6
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9756
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	9.41
Jumbo Phage?	No

Genome Content
Length (bps)	54,401
GC Content	42.52%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	53
CDS Density	94%
Average CDS Length (bps)	969.74
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1513680_1	phrog_1	76.9	3.4e-22	integrase	integration and excision
UniRef90	UHGV-1513680_1	UniRef90_A0A4S2EKI9	996.0	0	Transposase	N/A
eggNOG-mapper	UHGV-1513680_1	679191.HMPREF9018_0670	512.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1513680_1	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-1513680_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1513680_1	PF13102,PF17293,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1513680_2	1121129.KB903373_gene447	100.0	9.74e-24	N/A	N/A
KOfam	UHGV-1513680_3	K14056	51.9	0.000000000000014	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-1513680_3	phrog_8	45.0	0.0000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-1513680_3	UniRef90_UPI000EBB33E5	122.0	3.8e-35	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1513680_3	679937.Bcop_2150	62.4	0.0000000000265	Helix-turn-helix domain	N/A
PADLOC	UHGV-1513680_3	retron_type_VI_hth_cluster2_1	43.8	0.0000000000074	N/A	Retron
Pfam	UHGV-1513680_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1513680_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1513680_3	PF01381,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513680_6	UniRef90_A0A7D7IT14	73.6	5.75e-16	VgrG protein	N/A
eggNOG-mapper	UHGV-1513680_7	1227276.HMPREF9148_00167	87.0	3.32e-19	N/A	N/A
PHROG	UHGV-1513680_9	phrog_10089	1455.5	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1513680_9	UniRef90_UPI001F14BA06	5418.0	0	SNF2-related protein	N/A
eggNOG-mapper	UHGV-1513680_9	679191.HMPREF9018_0456	2051.0	0	helicase superfamily c-terminal domain	N/A
Pfam	UHGV-1513680_9	PF18823	N/A	N/A	Inorganic Pyrophosphatase	InPase
Pfam	UHGV-1513680_9	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1513680_9	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1513680_9	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
UniRef90	UHGV-1513680_10	UniRef90_A0A1F6RZR6	91.3	2.7e-18	HTH HARE-type domain-containing protein	N/A
structural_annotation	UHGV-1513680_10	PF11645,PF05066,MF_00048,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_12	phrog_2	72.7	5.4e-21	terminase large subunit	head and packaging
UniRef90	UHGV-1513680_12	UniRef90_UPI0013E9F59E	903.0	0	terminase	N/A
eggNOG-mapper	UHGV-1513680_12	1347393.HG726020_gene1832	499.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-1513680_12	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-1513680_12	PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513680_13	UniRef90_A0A173VHX4	311.0	0	Rhomboid domain-containing protein	N/A
Pfam	UHGV-1513680_13	PF01694	N/A	N/A	Rhomboid family	Rhomboid
structural_annotation	UHGV-1513680_13	PF01694,MF_01594,TIGR04239,COG0705	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_15	phrog_22323	113.2	2.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-1513680_15	563031.HMPREF0666_01148	124.0	3.65e-32	N/A	N/A
PHROG	UHGV-1513680_16	phrog_26635	65.0	5e-19	N/A	unknown function
UniRef90	UHGV-1513680_16	UniRef90_R7DGV7	91.3	5.93e-16	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1513680_16	742726.HMPREF9448_00705	92.4	4.54e-17	N/A	N/A
structural_annotation	UHGV-1513680_16	PF17236,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_18	phrog_22135	65.2	1.1e-18	N/A	unknown function
structural_annotation	UHGV-1513680_18	PF17212	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513680_19	UniRef90_UPI001BDF6171	2353.0	0	right-handed parallel beta-helix repeat-containing protein	N/A
eggNOG-mapper	UHGV-1513680_19	449673.BACSTE_02041	103.0	1.82e-19	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-1513680_19	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-1513680_21	phrog_9391	60.9	4.3e-34	N/A	unknown function
UniRef90	UHGV-1513680_21	UniRef90_UPI001C38A0C8	377.0	0	CotH kinase family protein	N/A
eggNOG-mapper	UHGV-1513680_21	1233951.IO90_08605	283.0	0	CotH kinase protein	N/A
Pfam	UHGV-1513680_21	PF08757	N/A	N/A	CotH kinase protein	CotH
KOfam	UHGV-1513680_22	K13730	69.2	3.7e-20	inlA; internalin A	N/A
structural_annotation	UHGV-1513680_22	NF033190,COG4886	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_24	phrog_15037	46.1	0.00000000000057	N/A	unknown function
UniRef90	UHGV-1513680_24	UniRef90_UPI0015E74944	75.9	0.0000000000000215	phage holin family protein	N/A
eggNOG-mapper	UHGV-1513680_24	742766.HMPREF9455_03105	119.0	6.33e-32	N/A	N/A
structural_annotation	UHGV-1513680_24	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_25	phrog_873	127.4	9.7e-38	endolysin	head and packaging
UniRef90	UHGV-1513680_25	UniRef90_A0A7K0H713	269.0	0	Structural protein P5	N/A
eggNOG-mapper	UHGV-1513680_25	1235803.C825_05325	226.0	0	N/A	N/A
PHROG	UHGV-1513680_26	phrog_32732	104.8	5.1e-31	N/A	unknown function
UniRef90	UHGV-1513680_26	UniRef90_R6YL95	166.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1513680_26	762982.HMPREF9442_01182	160.0	0	N/A	N/A
dbAPIS	UHGV-1513680_26	APIS052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1513680_26	PF10458	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_27	phrog_26448	83.4	2.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1513680_27	1235803.C825_05324	187.0	0	N/A	N/A
Pfam	UHGV-1513680_27	PF20647	N/A	N/A	N/A	DUF6808
structural_annotation	UHGV-1513680_27	PF20647	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1513680_28	762968.HMPREF9441_00556	48.9	0.00000414	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-1513680_28	PF08299,NF004688	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513680_29	UniRef90_UPI000E481466	190.0	0	N/A	N/A
UniRef90	UHGV-1513680_30	UniRef90_A0A7M1RVK1	69.3	0.0000000000114	Nuclear pore complex-like protein	N/A
PHROG	UHGV-1513680_35	phrog_156	187.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1513680_35	679191.HMPREF9018_0455	443.0	0	N/A	N/A
structural_annotation	UHGV-1513680_35	PF16510,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_40	phrog_32516	309.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1513680_40	1121098.HMPREF1534_01101	460.0	0	N/A	N/A
structural_annotation	UHGV-1513680_40	PF11134,COG3292	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513680_45	UniRef90_A0A496CXC5	250.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513680_45	742727.HMPREF9447_04873	52.0	0.000000573	N/A	N/A
Pfam	UHGV-1513680_45	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1513680_45	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_47	phrog_874	96.4	1.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-1513680_47	762968.HMPREF9441_00541	163.0	0	N/A	N/A
structural_annotation	UHGV-1513680_47	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513680_48	UniRef90_F3PFX8	210.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1513680_48	483216.BACEGG_01967	217.0	0	N/A	N/A
KOfam	UHGV-1513680_50	K06223	196.2	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1513680_50	phrog_56	172.0	0	DNA methyltransferase	other
UniRef90	UHGV-1513680_50	UniRef90_A6LAB7	553.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1513680_50	435591.BDI_0862	553.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1513680_50	MTase_II_00030	109.7	4.3e-32	Type II methyltransferase	RM
Pfam	UHGV-1513680_50	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1513680_50	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1513680_50	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1513680_53	phrog_1408	97.7	1.2e-28	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513680_53	UniRef90_UPI001F03A329	246.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513680_53	435591.BDI_0859	190.0	0	DnaD domain protein	N/A
COG	UHGV-1513680_53	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1513680_53	PF09681,TIGR01714,COG3355	N/A	N/A	N/A	N/A