UHGV-1515562 (vOTU-065838)

Viral Genome: UHGV-1515562

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1515562
vOTU ID	vOTU-065838
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0332572
Associated Biosample	SAMEA2467042
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	93.11 (High-quality)
Trimmed?	No
CheckV Viral Markers	19
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9794
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	57.06
Jumbo Phage?	No

Genome Content
Length (bps)	33,018
GC Content	46.47%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	47
CDS Density	95%
Average CDS Length (bps)	670.02
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1515562_1	1160721.RBI_II00522	58.2	0.0000000000406	N/A	N/A
PHROG	UHGV-1515562_2	phrog_134	49.1	0.000000000000071	N/A	unknown function
UniRef90	UHGV-1515562_2	UniRef90_A0A373VFP4	86.3	2.48e-21	XkdX family protein	N/A
eggNOG-mapper	UHGV-1515562_2	1298920.KI911353_gene543	62.4	0.00000000000106	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1515562_2	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1515562_2	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_4	phrog_19280	183.0	0	N/A	unknown function
UniRef90	UHGV-1515562_4	UniRef90_W0U6W8	749.0	0	N/A	N/A
eggNOG-mapper	UHGV-1515562_4	1160721.RBI_I01569	749.0	0	N/A	N/A
Pfam	UHGV-1515562_4	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1515562_4	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1515562_5	1410617.JHXH01000006_gene232	80.1	0.0000000000000603	N/A	N/A
structural_annotation	UHGV-1515562_5	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_7	phrog_6616	48.0	1.6e-21	tail protein	tail
eggNOG-mapper	UHGV-1515562_7	1160721.RBI_II00526	507.0	0	N/A	N/A
structural_annotation	UHGV-1515562_7	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_8	phrog_1194	90.3	1.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1515562_8	1160721.RBI_II00527	204.0	0	N/A	N/A
structural_annotation	UHGV-1515562_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_9	phrog_1535	266.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1515562_9	UniRef90_R6TDK7	1287.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-1515562_9	1226322.HMPREF1545_00059	433.0	0	tape measure	N/A
COG	UHGV-1515562_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1515562_9	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_10	phrog_706	146.7	1.20512e-43	N/A	unknown function
UniRef90	UHGV-1515562_10	UniRef90_UPI001B3C82AE	216.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1515562_10	1449050.JNLE01000003_gene3882	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1515562_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1515562_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_11	phrog_11299	176.7	0	N/A	unknown function
structural_annotation	UHGV-1515562_11	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_12	phrog_3099	149.9	1.12104e-44	N/A	unknown function
eggNOG-mapper	UHGV-1515562_12	1160721.RBI_II00532	208.0	0	N/A	N/A
structural_annotation	UHGV-1515562_12	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_13	phrog_3266	123.4	9.7e-37	tail completion	connector
eggNOG-mapper	UHGV-1515562_13	411902.CLOBOL_00130	112.0	1.08e-29	N/A	N/A
structural_annotation	UHGV-1515562_13	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_14	phrog_556	124.1	4.5e-37	minor head protein	head and packaging
UniRef90	UHGV-1515562_14	UniRef90_UPI00143BEF55	125.0	4.86e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-1515562_14	1449050.JNLE01000003_gene3886	107.0	9.02e-28	N/A	N/A
Pfam	UHGV-1515562_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1515562_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_15	phrog_3366	73.7	2.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1515562_15	1449050.JNLE01000003_gene3887	80.9	4.39e-18	N/A	N/A
Pfam	UHGV-1515562_15	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1515562_15	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_16	phrog_541	92.3	4e-27	head-tail adaptor	connector
UniRef90	UHGV-1515562_16	UniRef90_A0A371AQT0	104.0	1.23e-26	N/A	N/A
eggNOG-mapper	UHGV-1515562_16	1304866.K413DRAFT_3039	94.4	2.84e-23	N/A	N/A
PHROG	UHGV-1515562_17	phrog_544	348.5	0	major head protein	head and packaging
UniRef90	UHGV-1515562_17	UniRef90_R6T873	660.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-1515562_17	936580.HMPREF1516_0718	320.0	0	N/A	N/A
NCBIFam	UHGV-1515562_17	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1515562_17	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_18	phrog_194	101.9	7e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-1515562_18	UniRef90_R6U550	377.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1515562_18	742765.HMPREF9457_02126	154.0	8.40779e-45	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1515562_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1515562_18	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1515562_19	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_20	phrog_581	334.1	0	minor head protein	head and packaging
UniRef90	UHGV-1515562_20	UniRef90_R6SXL7	993.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1515562_20	658655.HMPREF0988_02563	410.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1515562_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1515562_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1515562_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_21	phrog_533	348.1	0	portal protein	head and packaging
UniRef90	UHGV-1515562_21	UniRef90_R6TDI6	885.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1515562_21	1304866.K413DRAFT_3035	440.0	0	N/A	N/A
structural_annotation	UHGV-1515562_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1515562_22	K06909	417.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1515562_22	phrog_18557	160.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1515562_22	UniRef90_A0A1C6IMR2	1096.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1515562_22	411461.DORFOR_01162	661.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1515562_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1515562_22	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1515562_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1515562_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1515562_22	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_23	phrog_36	41.9	0.000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1515562_23	UniRef90_A0A374HLM1	249.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1515562_23	1304880.JAGB01000002_gene2225	52.4	0.00000124	N/A	N/A
structural_annotation	UHGV-1515562_23	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_24	phrog_22543	44.3	0.0000000000034	N/A	unknown function
KOfam	UHGV-1515562_26	K06919	110.6	1.3e-32	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1515562_26	phrog_1829	855.7	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1515562_26	UniRef90_A0A356CZ91	1529.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1515562_26	1410670.JHXF01000015_gene2274	845.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1515562_26	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1515562_26	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1515562_26	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1515562_26	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1515562_26	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1515562_26	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_27	phrog_378	98.4	9.1e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1515562_27	UniRef90_A0A373SL44	374.0	0	N/A	N/A
eggNOG-mapper	UHGV-1515562_27	1423807.BACO01000050_gene1454	79.3	6.11e-16	N/A	N/A
Pfam	UHGV-1515562_27	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1515562_27	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_28	phrog_5702	80.1	1.3e-23	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1515562_28	UniRef90_A0A373SNE0	205.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1515562_28	1410670.JHXF01000015_gene2271	138.0	4.19997e-41	VRR_NUC	N/A
Pfam	UHGV-1515562_28	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1515562_28	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-1515562_29	K19789	323.1	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-1515562_29	phrog_16	279.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1515562_29	UniRef90_A0A356CZA9	894.0	0	Helicase	N/A
eggNOG-mapper	UHGV-1515562_29	1410670.JHXF01000015_gene2270	589.0	0	helicase	N/A
PADLOC	UHGV-1515562_29	mREase_IV_00005	103.7	3.3e-31	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1515562_29	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1515562_29	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1515562_29	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1515562_29	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_30	phrog_1366	237.3	0	N/A	unknown function
UniRef90	UHGV-1515562_30	UniRef90_R6S946	438.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1515562_30	1410670.JHXF01000015_gene2269	385.0	0	AAA domain	N/A
Pfam	UHGV-1515562_30	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1515562_30	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1515562_30	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_31	phrog_253	110.3	1.4e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1515562_31	UniRef90_UPI0019171ADA	118.0	2.72e-30	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1515562_31	881621.LIV_2167	76.3	0.00000000000000427	Siphovirus Gp157	N/A
Pfam	UHGV-1515562_31	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1515562_31	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_32	phrog_15609	88.5	3.5e-26	N/A	unknown function
UniRef90	UHGV-1515562_32	UniRef90_A0A373SLQ6	464.0	0	N/A	N/A
eggNOG-mapper	UHGV-1515562_32	641112.ACOK01000073_gene2872	103.0	4.97e-23	N/A	N/A
structural_annotation	UHGV-1515562_32	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_33	phrog_8470	201.5	0	N/A	unknown function
UniRef90	UHGV-1515562_33	UniRef90_UPI0019175B9C	316.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1515562_33	641112.ACOK01000073_gene2870	404.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1515562_33	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1515562_33	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_34	phrog_38338	97.1	1.6e-28	N/A	unknown function
UniRef90	UHGV-1515562_34	UniRef90_UPI00137B3A8C	85.5	1.57e-18	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-1515562_34	641112.ACOK01000073_gene2869	91.7	2.23e-22	N/A	N/A
structural_annotation	UHGV-1515562_41	PF01775,MF_00273,NF010188	N/A	N/A	N/A	N/A
UniRef90	UHGV-1515562_44	UniRef90_R6TEQ2	142.0	2.67648e-43	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1515562_44	246199.CUS_5910	120.0	4.55e-35	N/A	N/A
structural_annotation	UHGV-1515562_44	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1515562_45	K01356	122.6	4.6e-36	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1515562_45	phrog_4	137.2	1.3e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-1515562_45	UniRef90_R6T2B0	429.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-1515562_45	246199.CUS_5911	234.0	0	N/A	N/A
Pfam	UHGV-1515562_45	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-1515562_45	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1515562_45	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1515562_45	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1515562_46	phrog_10292	54.5	5.9e-16	N/A	unknown function
UniRef90	UHGV-1515562_46	UniRef90_R6T9F1	218.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1515562_46	556261.HMPREF0240_02202	79.7	3.48e-17	TM2 domain	N/A
Pfam	UHGV-1515562_46	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1515562_46	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1515562_47	K06400	356.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1515562_47	phrog_95	353.3	0	integrase	integration and excision
UniRef90	UHGV-1515562_47	UniRef90_A0A3D4JJV8	423.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1515562_47	537013.CLOSTMETH_01697	421.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1515562_47	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1515562_47	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1515562_47	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1515562_47	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1515562_47	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A