UHGV-1525911 (vOTU-163361)

Viral Genome: UHGV-1525911

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1525911
vOTU ID	vOTU-163361
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0251313
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	79.9 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	19
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9814
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	51.56
Jumbo Phage?	No

Genome Content
Length (bps)	31,277
GC Content	46.52%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	52
CDS Density	93%
Average CDS Length (bps)	557.19
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 79.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1525911_2	K08640	110.1	2.8e-32	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1525911_2	phrog_894	87.9	1.4e-25	endolysin	lysis
UniRef90	UHGV-1525911_2	UniRef90_A0A1Q6R3X6	244.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1525911_2	696369.KI912183_gene1840	112.0	2.68e-30	Peptidase M15A	N/A
Pfam	UHGV-1525911_2	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1525911_2	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525911_2	PF08291,NF000086,COG3108	N/A	N/A	N/A	N/A
UniRef90	UHGV-1525911_3	UniRef90_R6X5E0	298.0	0	Holin domain protein	N/A
eggNOG-mapper	UHGV-1525911_3	936573.HMPREF1147_1740	103.0	2.02e-25	Bacteriophage holin family	N/A
Pfam	UHGV-1525911_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-1525911_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_4	phrog_1141	71.9	8.4e-21	tail fiber protein	tail
UniRef90	UHGV-1525911_4	UniRef90_R6WJZ0	152.0	3.22299e-44	N/A	N/A
eggNOG-mapper	UHGV-1525911_4	1504672.669782887	55.8	0.000000233	N/A	N/A
Pfam	UHGV-1525911_4	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-1525911_4	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_5	phrog_13336	41.6	3.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-1525911_5	2754.EH55_13265	98.2	1.3e-20	N/A	N/A
eggNOG-mapper	UHGV-1525911_6	568816.Acin_1905	410.0	0	N/A	N/A
structural_annotation	UHGV-1525911_6	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_7	phrog_33	82.4	8.7e-24	distal tail protein Dit	tail
UniRef90	UHGV-1525911_7	UniRef90_UPI0015588CAB	290.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1525911_7	568816.Acin_1906	160.0	1.4013e-45	Phage tail protein	N/A
structural_annotation	UHGV-1525911_7	PF20753,PF19512,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_8	phrog_9959	134.9	4.40008e-42	tail length tape measure protein	tail
UniRef90	UHGV-1525911_8	UniRef90_R6WQ18	363.0	0	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-1525911_8	1273103.NM10_06751	171.0	1.07e-40	tape measure	N/A
Pfam	UHGV-1525911_8	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1525911_8	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1525911_8	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1525911_8	PF20155,MF_04138,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525911_10	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_11	phrog_1407	97.8	9.2e-29	major tail protein	tail
UniRef90	UHGV-1525911_11	UniRef90_A0A380NJ51	143.0	9.54999e-41	Predicted secreted protein	N/A
eggNOG-mapper	UHGV-1525911_11	1000569.HMPREF1040_0191	137.0	4.11e-39	Phage tail tube protein	N/A
Pfam	UHGV-1525911_11	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
COG	UHGV-1525911_11	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1525911_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1525911_12	UniRef90_R6WK09	86.7	2.51e-19	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1525911_12	1111454.HMPREF1250_1050	60.8	0.000000000525	N/A	N/A
structural_annotation	UHGV-1525911_12	PF08873,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1525911_13	1273103.NM10_06776	78.2	6.59e-17	N/A	N/A
PHROG	UHGV-1525911_14	phrog_5	49.0	0.00000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-1525911_14	UniRef90_F9MMJ2	99.8	7.68e-24	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1525911_14	1000569.HMPREF1040_0194	99.8	1.29e-24	Phage virion morphogenesis	N/A
COG	UHGV-1525911_14	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525911_14	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_15	phrog_422	219.6	0	major head protein	head and packaging
UniRef90	UHGV-1525911_15	UniRef90_R6WWZ7	534.0	0	Gp7	N/A
eggNOG-mapper	UHGV-1525911_15	1352230.S6AVV3_9CAUD	351.0	0	N/A	N/A
NCBIFam	UHGV-1525911_15	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1525911_15	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1525911_16	1280706.AUJE01000003_gene2260	110.0	2.69e-27	N/A	N/A
structural_annotation	UHGV-1525911_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_19	phrog_1657	94.8	1.9e-29	head morphogenesis	head and packaging
UniRef90	UHGV-1525911_19	UniRef90_R6AE12	400.0	0	TNT domain-containing protein	N/A
eggNOG-mapper	UHGV-1525911_19	1232428.CAVO010000021_gene805	278.0	0	N/A	N/A
PHROG	UHGV-1525911_20	phrog_145	148.6	1.4013e-44	portal protein	head and packaging
UniRef90	UHGV-1525911_20	UniRef90_R6WQ48	890.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1525911_20	1232428.CAVO010000021_gene806	324.0	0	N/A	N/A
structural_annotation	UHGV-1525911_20	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_21	phrog_30251	645.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1525911_21	UniRef90_UPI001F2335B1	647.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1525911_21	1499683.CCFF01000014_gene3915	602.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-1525911_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1525911_21	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1525911_21	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525911_21	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-1525911_23	UniRef90_R6X5I6	272.0	0	PhageMetallopep domain-containing protein	N/A
eggNOG-mapper	UHGV-1525911_23	926561.KB900624_gene2638	65.9	0.0000000000237	N/A	N/A
Pfam	UHGV-1525911_23	PF18894	N/A	N/A	Putative phage metallopeptidase	PhageMetallopep
structural_annotation	UHGV-1525911_23	PF18894,COG4900	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1525911_24	568816.Acin_1817	108.0	4.95e-28	N/A	N/A
PHROG	UHGV-1525911_25	phrog_36	81.8	8.8e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1525911_25	UniRef90_R6WQ64	285.0	0	Sigma-70 region 4 domain protein	N/A
eggNOG-mapper	UHGV-1525911_25	663278.Ethha_1825	58.9	0.00000000477	N/A	N/A
Pfam	UHGV-1525911_25	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1525911_25	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1525911_25	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_28	phrog_190	126.5	1.9e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525911_28	UniRef90_A0A7X7UA97	119.0	1.99e-32	N/A	N/A
eggNOG-mapper	UHGV-1525911_28	315749.Bcer98_2611	94.7	2.28e-23	N/A	N/A
Pfam	UHGV-1525911_28	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1525911_28	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1525911_30	K03111	143.5	2.20004e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1525911_30	phrog_44	149.7	1.54143e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525911_30	UniRef90_R6WK64	263.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1525911_30	626939.HMPREF9443_01150	178.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1525911_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1525911_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1525911_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1525911_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1525911_30	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525911_31	NF011854	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_34	phrog_236	108.4	1.2e-31	nucleotide kinase	other
UniRef90	UHGV-1525911_34	UniRef90_U7UMX2	126.0	1.6e-36	PF11753 family protein	N/A
eggNOG-mapper	UHGV-1525911_34	1111454.HMPREF1250_1038	126.0	2.68e-37	N/A	N/A
Pfam	UHGV-1525911_34	PF11753	N/A	N/A	N/A	DUF3310
eggNOG-mapper	UHGV-1525911_35	760568.Desku_0913	78.2	5.52e-17	N/A	N/A
PHROG	UHGV-1525911_37	phrog_374	62.5	9.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1525911_37	60520.HR47_11980	67.8	0.00000000000197	N/A	N/A
KOfam	UHGV-1525911_38	K02315	190.3	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1525911_38	phrog_50	167.5	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525911_38	UniRef90_R6WX70	536.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1525911_38	796942.HMPREF9623_00441	232.0	0	N/A	N/A
Pfam	UHGV-1525911_38	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1525911_38	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1525911_38	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1525911_38	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_39	phrog_4880	194.4	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525911_39	UniRef90_R6WQA7	389.0	0	DnaD and phage-associated domain protein	N/A
eggNOG-mapper	UHGV-1525911_39	272562.CA_C1934	139.0	2.87e-37	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-1525911_39	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1525911_39	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-1525911_39	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_40	phrog_72	68.2	8.2e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525911_40	UniRef90_UPI000C7BF263	119.0	4.63e-31	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1525911_40	1507.HMPREF0262_00432	122.0	6.08e-33	N/A	N/A
Pfam	UHGV-1525911_40	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-1525911_40	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_41	phrog_7566	89.6	2.2e-26	N/A	unknown function
UniRef90	UHGV-1525911_41	UniRef90_A0A1I0JPK6	67.8	0.000000000000791	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1525911_41	483218.BACPEC_01171	50.4	0.00000145	N/A	N/A
PHROG	UHGV-1525911_42	phrog_155	130.3	1.4e-38	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525911_42	UniRef90_UPI0015943421	179.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1525911_42	1298920.KI911353_gene4870	163.0	0	ERF superfamily	N/A
Pfam	UHGV-1525911_42	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1525911_42	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_43	phrog_253	101.7	7.4e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525911_43	UniRef90_R6WX74	304.0	0	Siphovirus family protein	N/A
eggNOG-mapper	UHGV-1525911_43	411470.RUMGNA_02192	135.0	1.87e-38	Siphovirus Gp157	N/A
Pfam	UHGV-1525911_43	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1525911_43	PF05565	N/A	N/A	N/A	N/A
UniRef90	UHGV-1525911_45	UniRef90_R6XZA3	169.0	0	LysM domain protein	N/A
structural_annotation	UHGV-1525911_45	MF_02014,NF010723	N/A	N/A	N/A	N/A
UniRef90	UHGV-1525911_46	UniRef90_R6WX79	135.0	3.01999e-40	DNA binding domain excisionase family protein	N/A
eggNOG-mapper	UHGV-1525911_46	318464.IO99_13850	75.9	2e-17	Helix-turn-helix domain	N/A
Pfam	UHGV-1525911_46	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1525911_46	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
KOfam	UHGV-1525911_48	K07741	142.4	6.19934e-42	antB; anti-repressor protein	N/A
PHROG	UHGV-1525911_48	phrog_130	267.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1525911_48	UniRef90_R6WX82	459.0	0	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-1525911_48	1123299.AUKZ01000018_gene216	290.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1525911_48	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1525911_48	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1525911_48	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1525911_48	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-1525911_49	K07729	42.7	0.000000000012	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1525911_49	phrog_3	40.6	0.000000000093	transcriptional repressor	transcription regulation
UniRef90	UHGV-1525911_49	UniRef90_R6XZB2	119.0	5.51e-34	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1525911_49	632245.CLP_2950	53.1	0.0000000134	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1525911_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1525911_49	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1525911_49	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1525911_50	K22299	59.0	1.2e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1525911_50	phrog_8	51.2	0.000000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-1525911_50	UniRef90_R6WK78	160.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1525911_50	1444310.JANV01000024_gene1355	100.0	1.43e-24	Peptidase S24-like	N/A
PADLOC	UHGV-1525911_50	retron_type_VI_hth_cluster2_1	46.2	0.00000000000083	N/A	Retron
Pfam	UHGV-1525911_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1525911_50	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1525911_50	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_51	phrog_87	70.1	2.4e-20	metallo-protease	other
UniRef90	UHGV-1525911_51	UniRef90_A0A316S783	146.0	6.23578e-43	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1525911_51	1122217.KB899571_gene1128	85.1	2.42e-19	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1525911_51	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1525911_51	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1525911_51	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1525911_52	phrog_1847	341.2	0	N/A	unknown function
UniRef90	UHGV-1525911_52	UniRef90_A0A174D4Z6	388.0	0	T5orf172 domain	N/A
eggNOG-mapper	UHGV-1525911_52	1123511.KB905857_gene1688	359.0	0	T5orf172	N/A
Pfam	UHGV-1525911_52	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1525911_52	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-1525911_52	PF13250,NF041454	N/A	N/A	N/A	N/A