UHGV-1530929 (vOTU-016274)

Viral Genome: UHGV-1530929

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1530929
vOTU ID	vOTU-016274
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0276235
Associated Biosample	SAMEA2737822
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	53.25 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	9
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.8782
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	22.28
Jumbo Phage?	No

Genome Content
Length (bps)	28,048
GC Content	45.30%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	29
CDS Density	97%
Average CDS Length (bps)	936.62
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.25)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1530929_1	phrog_1272	115.0	6.4e-34	tail length tape measure protein	tail
UniRef90	UHGV-1530929_1	UniRef90_A0A8G0NSD2	180.0	8.40779e-45	Phage tail protein	N/A
eggNOG-mapper	UHGV-1530929_1	469617.FUAG_00846	195.0	0	tape measure	N/A
Pfam	UHGV-1530929_1	PF05017	N/A	N/A	TMP repeat	TMP
COG	UHGV-1530929_1	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1530929_1	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_2	phrog_23201	198.4	0	N/A	unknown function
UniRef90	UHGV-1530929_2	UniRef90_R6M2K3	158.0	3.50325e-44	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1530929_2	1145276.T479_01675	105.0	4.36e-26	LysM domain	N/A
COG	UHGV-1530929_2	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
KOfam	UHGV-1530929_3	K01448	75.5	6.4e-22	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1530929_3	phrog_400	244.8	0	tail protein	tail
UniRef90	UHGV-1530929_3	UniRef90_A0A1C5PJS5	387.0	0	Amidase_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1530929_3	1121090.KB894702_gene1246	67.4	0.000000014	n-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1530929_3	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1530929_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1530929_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1530929_4	PF10844,MF_00216,TIGR00523,COG0361	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_5	phrog_120	64.7	1.5e-18	baseplate protein	tail
eggNOG-mapper	UHGV-1530929_5	1449063.JMLS01000016_gene945	59.7	0.00000000129	N/A	N/A
Pfam	UHGV-1530929_5	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-1530929_5	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-1530929_5	PF10934,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_6	phrog_6	227.5	0	baseplate protein	tail
UniRef90	UHGV-1530929_6	UniRef90_A0A416D4L9	261.0	0	Baseplate j family protein	N/A
eggNOG-mapper	UHGV-1530929_6	1449126.JQKL01000051_gene3155	234.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-1530929_6	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-1530929_6	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1530929_6	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_7	phrog_521	115.5	4.6e-34	tail protein	tail
UniRef90	UHGV-1530929_7	UniRef90_UPI001F319AD3	111.0	1.5e-27	YmfQ family protein	N/A
eggNOG-mapper	UHGV-1530929_7	1121346.KB899820_gene2841	108.0	1.66e-27	N/A	N/A
Pfam	UHGV-1530929_7	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
COG	UHGV-1530929_7	COG3778	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1530929_7	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_8	phrog_32680	47.5	0.00000000000012	tail fiber protein	tail
PHROG	UHGV-1530929_9	phrog_19111	67.6	3.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-1530929_9	1297617.JPJD01000034_gene670	72.4	0.0000000000395	N/A	N/A
structural_annotation	UHGV-1530929_9	PF16756,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1530929_10	1297617.JPJD01000034_gene669	147.0	4.06377e-44	N/A	N/A
PHROG	UHGV-1530929_11	phrog_134	55.7	6.5e-16	N/A	unknown function
UniRef90	UHGV-1530929_11	UniRef90_A0A3E2WBQ5	63.5	0.00000000000133	XkdX family protein	N/A
eggNOG-mapper	UHGV-1530929_11	1297617.JPJD01000099_gene2170	64.3	0.000000000000112	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1530929_11	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-1530929_11	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-1530929_11	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_12	phrog_16573	43.8	0.000000000002	N/A	unknown function
eggNOG-mapper	UHGV-1530929_12	1160721.RBI_I01572	56.2	0.00000515	N/A	N/A
Pfam	UHGV-1530929_12	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-1530929_14	phrog_14242	91.3	2.6e-29	major head protein	head and packaging
UniRef90	UHGV-1530929_14	UniRef90_A0A355JD53	488.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1530929_14	588581.Cpap_1528	146.0	5.1e-37	N/A	N/A
NCBIFam	UHGV-1530929_14	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1530929_14	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1530929_16	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_17	phrog_511	66.6	3.7e-19	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1530929_17	1226322.HMPREF1545_00785	95.9	7.92e-18	N/A	N/A
structural_annotation	UHGV-1530929_17	PF11134,MF_00923,NF010237,NF038128,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1530929_21	PF09144,NF038393	N/A	N/A	N/A	N/A
PHROG	UHGV-1530929_22	phrog_32680	60.9	5.4e-30	tail fiber protein	tail
eggNOG-mapper	UHGV-1530929_22	1380600.AUYN01000010_gene879	71.2	0.00000000055	Hep Hag repeat protein	N/A
COG	UHGV-1530929_22	COG5295	N/A	N/A	Autotransporter adhesin	N/A
PHROG	UHGV-1530929_25	phrog_1863	49.6	0.000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-1530929_25	1226322.HMPREF1545_04027	48.9	0.00000191	N/A	N/A
PHROG	UHGV-1530929_27	phrog_263	82.5	2.9e-24	holin	lysis
UniRef90	UHGV-1530929_27	UniRef90_UPI001F05AFD4	98.2	4.41e-25	phage holin	N/A
eggNOG-mapper	UHGV-1530929_27	1121344.JHZO01000004_gene1372	92.4	1.38e-23	SPP1 phage holin	N/A
Pfam	UHGV-1530929_27	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-1530929_27	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1530929_27	PF04688,TIGR01592	N/A	N/A	N/A	N/A
KOfam	UHGV-1530929_28	K01371	58.7	4.3e-18	CTSK; cathepsin K [EC:3.4.22.38]	N/A
UniRef90	UHGV-1530929_28	UniRef90_A0A2D8CFG9	96.3	8.37e-19	Pept_C1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1530929_28	421072.IO89_07550	66.2	0.00000000151	Papain family cysteine protease	N/A
Pfam	UHGV-1530929_28	PF00112	N/A	N/A	Papain family cysteine protease	Peptidase_C1
Pfam	UHGV-1530929_28	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-1530929_28	COG4870	N/A	N/A	Cysteine protease, C1A family	N/A
structural_annotation	UHGV-1530929_28	PF00112,PF00395,COG4870	N/A	N/A	N/A	N/A
KOfam	UHGV-1530929_29	K01447	111.7	8.4e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1530929_29	phrog_670	138.2	5.60001e-41	endolysin	lysis
UniRef90	UHGV-1530929_29	UniRef90_UPI001C119825	205.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-1530929_29	857293.CAAU_0999	193.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1530929_29	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1530929_29	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1530929_29	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1530929_29	PF09992,PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A