UHGV-1533772 (vOTU-069632)

Viral Genome: UHGV-1533772

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1533772
vOTU ID	vOTU-069632
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0268430
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	92.64 (High-quality)
Trimmed?	No
CheckV Viral Markers	21
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9806
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	39.7
Jumbo Phage?	No

Genome Content
Length (bps)	34,091
GC Content	35.77%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	46
CDS Density	86%
Average CDS Length (bps)	639.91
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1533772_1	936589.HMPREF1521_0380	88.2	2.57e-21	Peptidase family S51	N/A
COG	UHGV-1533772_1	COG3340	N/A	N/A	Peptidase E	N/A
structural_annotation	UHGV-1533772_2	PF06531	N/A	N/A	N/A	N/A
KOfam	UHGV-1533772_3	K01448	165.9	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1533772_3	phrog_435	160.2	0	endolysin	lysis
UniRef90	UHGV-1533772_3	UniRef90_A0A096CMM2	241.0	0	Cell wall hydrolase (Fragment)	N/A
eggNOG-mapper	UHGV-1533772_3	1401067.HMPREF0872_07855	241.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1533772_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1533772_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1533772_3	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_4	phrog_27828	156.8	0	N/A	unknown function
UniRef90	UHGV-1533772_4	UniRef90_F5KZP5	120.0	7.3e-33	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1533772_4	546273.VEIDISOL_00738	121.0	4.95e-34	N/A	N/A
PHROG	UHGV-1533772_6	phrog_22483	88.0	9.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-1533772_7	1128111.HMPREF0870_01752	49.7	0.0000079	N/A	N/A
KOfam	UHGV-1533772_8	K16628	79.9	8.3e-24	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1533772_8	phrog_32779	58.8	8e-40	N/A	unknown function
eggNOG-mapper	UHGV-1533772_8	546273.VEIDISOL_01078	193.0	0	cell wall organization	N/A
Pfam	UHGV-1533772_8	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1533772_8	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-1533772_9	546273.VEIDISOL_01075	107.0	6.41e-29	N/A	N/A
structural_annotation	UHGV-1533772_9	PF17813,NF038186	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1533772_10	1120931.KB893937_gene2164	66.6	0.000000000519	N/A	N/A
PHROG	UHGV-1533772_11	phrog_521	111.8	5e-33	tail protein	tail
UniRef90	UHGV-1533772_11	UniRef90_A0A2S7YX47	320.0	0	N/A	N/A
eggNOG-mapper	UHGV-1533772_11	546273.VEIDISOL_01073	315.0	0	N/A	N/A
Pfam	UHGV-1533772_11	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
structural_annotation	UHGV-1533772_11	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_12	phrog_6	159.4	0	baseplate protein	tail
UniRef90	UHGV-1533772_12	UniRef90_C4FQK4	579.0	0	Baseplate J-like protein	N/A
eggNOG-mapper	UHGV-1533772_12	546273.VEIDISOL_01072	579.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-1533772_12	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-1533772_12	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1533772_12	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_13	phrog_120	84.0	1.3e-24	baseplate protein	tail
UniRef90	UHGV-1533772_13	UniRef90_A0A3A6WE45	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-1533772_13	546273.VEIDISOL_01071	240.0	0	N/A	N/A
Pfam	UHGV-1533772_13	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-1533772_13	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-1533772_13	PF10934,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_14	phrog_579	98.0	5.8e-29	N/A	unknown function
UniRef90	UHGV-1533772_14	UniRef90_A0A3A6W0I0	210.0	0	N/A	N/A
eggNOG-mapper	UHGV-1533772_14	546273.VEIDISOL_01070	219.0	0	N/A	N/A
Pfam	UHGV-1533772_14	PF10844	N/A	N/A	N/A	DUF2577
structural_annotation	UHGV-1533772_14	PF10844	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_15	phrog_400	240.3	0	tail protein	tail
UniRef90	UHGV-1533772_15	UniRef90_UPI000CF8ACDE	254.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-1533772_15	546273.VEIDISOL_01069	655.0	0	PFAM Phage late control gene D protein (GPD)	N/A
COG	UHGV-1533772_15	COG4193	N/A	N/A	Beta- N-acetylglucosaminidase	N/A
structural_annotation	UHGV-1533772_15	PF14594,PF05382,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_16	phrog_380	160.6	0	endolysin	lysis
UniRef90	UHGV-1533772_16	UniRef90_A0A496P7P0	214.0	0	Peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1533772_16	546273.VEIDISOL_01068	335.0	0	PFAM LysM domain	N/A
COG	UHGV-1533772_16	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-1533772_16	PF21821,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_17	phrog_1068	409.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1533772_17	UniRef90_A0A3A6W8X2	789.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1533772_17	546273.VEIDISOL_01067	386.0	0	tape measure	N/A
Pfam	UHGV-1533772_17	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1533772_17	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1533772_17	COG5281	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1533772_17	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_18	phrog_389	101.8	5.3e-30	tail protein XkdN-like	tail
UniRef90	UHGV-1533772_18	UniRef90_A0A2S7YX39	205.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1533772_18	1321779.HMPREF1984_01297	84.3	1.9e-18	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-1533772_18	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-1533772_18	PF08890,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_19	phrog_365	132.8	1.5e-39	tail protein	tail
UniRef90	UHGV-1533772_19	UniRef90_A0A259V0S2	122.0	1.42e-32	Phage-like element PBSX protein XkdM	N/A
eggNOG-mapper	UHGV-1533772_19	546273.VEIDISOL_00721	119.0	6.82e-32	Phage tail tube protein	N/A
Pfam	UHGV-1533772_19	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-1533772_19	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_20	phrog_279	345.6	0	tail sheath	tail
UniRef90	UHGV-1533772_20	UniRef90_U7UPL4	572.0	0	Phage tail sheath protein	N/A
eggNOG-mapper	UHGV-1533772_20	546273.VEIDISOL_01064	771.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-1533772_20	PF17481	N/A	N/A	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
Pfam	UHGV-1533772_20	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-1533772_20	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-1533772_20	PF17482,PF04984,PF17481,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_21	phrog_966	44.3	0.0000000000011	N/A	unknown function
PHROG	UHGV-1533772_22	phrog_525	98.0	7.8e-29	N/A	unknown function
UniRef90	UHGV-1533772_22	UniRef90_A0A0D3VCS5	82.0	3.87e-17	N/A	N/A
eggNOG-mapper	UHGV-1533772_22	546273.VEIDISOL_01062	201.0	0	N/A	N/A
Pfam	UHGV-1533772_22	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-1533772_22	PF20765,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_23	phrog_5	51.0	0.000000000000032	tail completion or Neck1 protein	connector
UniRef90	UHGV-1533772_23	UniRef90_A0A3A6WE51	222.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1533772_23	546273.VEIDISOL_01061	216.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1533772_23	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1533772_23	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_24	phrog_615	88.3	6.5e-26	head-tail adaptor	connector
UniRef90	UHGV-1533772_24	UniRef90_UPI00110CBC63	63.2	0.000000000257	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-1533772_24	546273.VEIDISOL_01060	189.0	0	N/A	N/A
structural_annotation	UHGV-1533772_24	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_25	phrog_132	44.0	0.0000000000033	head-tail adaptor	connector
eggNOG-mapper	UHGV-1533772_25	546273.VEIDISOL_01059	152.0	0	N/A	N/A
structural_annotation	UHGV-1533772_25	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_26	phrog_544	260.5	0	major head protein	head and packaging
UniRef90	UHGV-1533772_26	UniRef90_A0A2S7YX03	343.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1533772_26	546273.VEIDISOL_00714	327.0	0	N/A	N/A
NCBIFam	UHGV-1533772_26	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1533772_26	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_27	phrog_194	149.8	1.4013e-45	head scaffolding protein	head and packaging
UniRef90	UHGV-1533772_27	UniRef90_C4FQI9	191.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1533772_27	1111454.HMPREF1250_0176	156.0	1.4013e-45	Phage minor structural protein GP20	N/A
Pfam	UHGV-1533772_27	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1533772_27	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_28	phrog_115	334.0	0	minor head protein	head and packaging
UniRef90	UHGV-1533772_28	UniRef90_A0A2S7YX25	415.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1533772_28	546273.VEIDISOL_01056	410.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1533772_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1533772_28	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1533772_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1533772_28	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_29	phrog_64	296.0	0	portal protein	head and packaging
UniRef90	UHGV-1533772_29	UniRef90_A0A2S7YX49	595.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1533772_29	546273.VEIDISOL_01055	528.0	0	Portal protein	N/A
Pfam	UHGV-1533772_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1533772_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1533772_30	phrog_30251	662.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1533772_30	UniRef90_A0A3A6WL61	691.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1533772_30	546273.VEIDISOL_01054	697.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-1533772_30	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1533772_30	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1533772_30	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1533772_30	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1533772_36	PF07374	N/A	N/A	N/A	N/A
KOfam	UHGV-1533772_38	K03091	70.6	2.7e-21	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-1533772_38	phrog_351	72.3	1.4e-21	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-1533772_38	UniRef90_A0A3A6W746	113.0	2.04e-26	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1533772_38	546273.VEIDISOL_01050	104.0	8.96e-24	sigma factor activity	N/A
Pfam	UHGV-1533772_38	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
NCBIFam	UHGV-1533772_38	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-1533772_38	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
PHROG	UHGV-1533772_43	phrog_3377	137.6	8.10007e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1533772_43	UniRef90_Q4Z920	97.4	1.33e-21	ORF076	N/A
eggNOG-mapper	UHGV-1533772_43	546273.VEIDISOL_01044	184.0	0	N/A	N/A
structural_annotation	UHGV-1533772_43	PF17375	N/A	N/A	N/A	N/A
Pfam	UHGV-1533772_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1533772_45	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-1533772_46	K14059	177.9	0	int; integrase	N/A
PHROG	UHGV-1533772_46	phrog_1	190.1	0	integrase	integration and excision
UniRef90	UHGV-1533772_46	UniRef90_C4FQH3	470.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1533772_46	546273.VEIDISOL_01041	470.0	0	Phage integrase family	N/A
Pfam	UHGV-1533772_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1533772_46	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1533772_46	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A