UHGV-1537358 (vOTU-082140)

Viral Genome: UHGV-1537358

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1537358
vOTU ID	vOTU-082140
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0304682
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.83 (High-quality)
Trimmed?	No
CheckV Viral Markers	21
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9821
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	58.84
Jumbo Phage?	No

Genome Content
Length (bps)	41,183
GC Content	36.42%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	56
CDS Density	95%
Average CDS Length (bps)	695.09
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1537358_2	phrog_10797	224.3	0	N/A	unknown function
UniRef90	UHGV-1537358_2	UniRef90_A0A1B1I041	138.0	1.11e-37	Glycoprotease	N/A
eggNOG-mapper	UHGV-1537358_2	883156.HMPREF9282_01266	152.0	1.68156e-44	N/A	N/A
structural_annotation	UHGV-1537358_2	PF06531	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_3	phrog_34863	55.4	4.3e-16	N/A	unknown function
UniRef90	UHGV-1537358_3	UniRef90_UPI001D017339	156.0	5.32493e-44	chitosanase	N/A
eggNOG-mapper	UHGV-1537358_3	546273.VEIDISOL_01083	228.0	0	LysM domain	N/A
Pfam	UHGV-1537358_3	PF21277	N/A	N/A	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
COG	UHGV-1537358_3	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1537358_3	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_5	phrog_23091	227.4	0	N/A	unknown function
structural_annotation	UHGV-1537358_5	PF05105,NF035928	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1537358_7	PF21611	N/A	N/A	N/A	N/A
KOfam	UHGV-1537358_8	K13925	41.7	0.000000000011	pfbA; plasmin and fibronectin-binding protein A	N/A
UniRef90	UHGV-1537358_8	UniRef90_A0A2S7ZGN5	946.0	0	Pectate_lyase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1537358_8	1401067.HMPREF0872_00205	101.0	8.61e-20	tail collar domain protein	N/A
COG	UHGV-1537358_8	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1537358_8	PF05096,PF03906,MF_03008,TIGR03866,COG3204	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_9	phrog_9880	256.3	0	N/A	unknown function
UniRef90	UHGV-1537358_9	UniRef90_D1YMD8	2827.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1537358_9	568816.Acin_1824	498.0	0	N/A	N/A
Pfam	UHGV-1537358_9	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
KOfam	UHGV-1537358_10	K21471	67.3	2e-19	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-1537358_10	UniRef90_A0A096AJQ8	327.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1537358_10	1401067.HMPREF0872_06760	327.0	0	N/A	N/A
Pfam	UHGV-1537358_10	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-1537358_10	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_11	phrog_418	69.2	4.7e-20	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1537358_11	1401067.HMPREF0872_06765	171.0	0	N/A	N/A
structural_annotation	UHGV-1537358_11	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_12	phrog_308	69.8	4.3e-20	internal virion protein	head and packaging
UniRef90	UHGV-1537358_12	UniRef90_UPI001D08FF44	265.0	0	N/A	N/A
Pfam	UHGV-1537358_12	PF11090	N/A	N/A	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
structural_annotation	UHGV-1537358_12	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_13	phrog_376	638.7	0	tail protein	tail
UniRef90	UHGV-1537358_13	UniRef90_A0A3A4JUE0	321.0	0	E1_FCCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1537358_13	1401067.HMPREF0872_06775	632.0	0	N/A	N/A
structural_annotation	UHGV-1537358_13	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_14	phrog_394	168.6	0	tail protein	tail
eggNOG-mapper	UHGV-1537358_14	1401067.HMPREF0872_06780	216.0	0	N/A	N/A
structural_annotation	UHGV-1537358_14	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_16	phrog_427	52.6	0.0000000000000068	N/A	unknown function
structural_annotation	UHGV-1537358_16	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_17	phrog_212	152.0	0	major head protein	head and packaging
UniRef90	UHGV-1537358_17	UniRef90_A0A6J5QJX6	344.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1537358_17	1401067.HMPREF0872_06795	397.0	0	N/A	N/A
Pfam	UHGV-1537358_17	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1537358_17	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_18	phrog_458	92.5	6.1e-27	protease	other
eggNOG-mapper	UHGV-1537358_18	1401067.HMPREF0872_06800	118.0	1.71e-30	N/A	N/A
PHROG	UHGV-1537358_19	phrog_528	73.4	1.8e-21	N/A	unknown function
UniRef90	UHGV-1537358_19	UniRef90_A0A4S4AWB3	54.7	0.000000162	Endopeptidase	N/A
eggNOG-mapper	UHGV-1537358_19	1401067.HMPREF0872_06805	82.8	2.7e-19	N/A	N/A
PHROG	UHGV-1537358_20	phrog_332	457.9	0	head-tail adaptor	connector
UniRef90	UHGV-1537358_20	UniRef90_UPI001D07F371	1083.0	0	portal protein	N/A
eggNOG-mapper	UHGV-1537358_20	1401067.HMPREF0872_06810	590.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1537358_20	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1537358_20	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_22	phrog_5902	250.9	0	N/A	unknown function
UniRef90	UHGV-1537358_22	UniRef90_UPI0018A6EFE4	587.0	0	terminase	N/A
eggNOG-mapper	UHGV-1537358_22	1200557.JHWV01000001_gene277	576.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-1537358_22	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1537358_22	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1537358_23	K07474	131.4	1.2e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1537358_23	phrog_51	137.2	7.39998e-41	terminase small subunit	head and packaging
UniRef90	UHGV-1537358_23	UniRef90_UPI001D065029	266.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1537358_23	1280689.AUJC01000003_gene961	122.0	7.88e-34	Terminase small subunit	N/A
Pfam	UHGV-1537358_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1537358_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1537358_23	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_27	phrog_36	48.7	0.00000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-1537358_27	UniRef90_D1YMC4	87.4	5.01e-19	Phage transcriptional regulator, ArpU family	N/A
structural_annotation	UHGV-1537358_27	PF07374,TIGR02984	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_28	phrog_21026	67.6	4.5e-20	N/A	unknown function
PHROG	UHGV-1537358_29	phrog_419	106.6	2.8e-31	N/A	unknown function
UniRef90	UHGV-1537358_29	UniRef90_A0A6G6XL02	90.9	3.96e-22	MazG-like nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-1537358_29	1123263.AUKY01000015_gene1587	100.0	6.54e-27	N/A	N/A
structural_annotation	UHGV-1537358_29	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_31	phrog_774	76.0	5.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-1537358_31	1435051.BMOU_0242	58.5	0.00000000406	Helix-turn-helix domain	N/A
COG	UHGV-1537358_31	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
KOfam	UHGV-1537358_33	K01520	159.7	0	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1537358_33	phrog_135	154.2	0	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537358_33	UniRef90_UPI001D0616FF	265.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1537358_33	66692.ABC2847	124.0	2.34e-34	deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
Pfam	UHGV-1537358_33	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1537358_33	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1537358_33	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1537358_33	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_34	phrog_244	76.8	3.4e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537358_34	UniRef90_A0A841R0Q1	118.0	3.39e-32	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1537358_34	1200557.JHWV01000001_gene280	127.0	2.4e-36	N/A	N/A
structural_annotation	UHGV-1537358_34	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_35	phrog_918	100.6	7.3e-30	N/A	unknown function
UniRef90	UHGV-1537358_35	UniRef90_UPI001960DED1	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537358_35	1401067.HMPREF0872_03440	105.0	7.04e-29	N/A	N/A
Pfam	UHGV-1537358_35	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1537358_35	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-1537358_36	K00571	120.4	2.1e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1537358_36	phrog_67	99.6	2.1e-30	DNA methyltransferase	other
UniRef90	UHGV-1537358_36	UniRef90_UPI00196047F8	515.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1537358_36	749222.Nitsa_1817	389.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1537358_36	MTase_II_00157	100.7	3.3e-30	Type II methyltransferase	RM
Pfam	UHGV-1537358_36	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1537358_36	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1537358_36	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_37	phrog_2776	45.5	0.00000000000074	N/A	unknown function
UniRef90	UHGV-1537358_37	UniRef90_UPI001899258E	167.0	0	MmcB family DNA repair protein	N/A
structural_annotation	UHGV-1537358_37	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1537358_38	PF16857,MF_00273	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_39	phrog_954	220.7	0	DNA methyltransferase	other
UniRef90	UHGV-1537358_39	UniRef90_A0A496N4S3	276.0	0	Methyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-1537358_39	1401067.HMPREF0872_03435	269.0	0	methyltransferase	N/A
PADLOC	UHGV-1537358_39	MTase_II_00074	202.7	0	Type II methyltransferase	RM
Pfam	UHGV-1537358_39	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1537358_39	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-1537358_39	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1537358_40	PF11305,MF_01360	N/A	N/A	N/A	N/A
KOfam	UHGV-1537358_41	K03111	145.2	7.00649e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1537358_41	phrog_44	129.2	3.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537358_41	UniRef90_UPI000750C286	212.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1537358_41	936589.HMPREF1521_1228	186.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1537358_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1537358_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1537358_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1537358_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1537358_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_43	phrog_9804	61.8	1.1e-17	N/A	unknown function
structural_annotation	UHGV-1537358_43	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_44	phrog_5968	199.0	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537358_44	UniRef90_UPI0019608C6C	446.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1537358_44	565664.EFXG_01794	201.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-1537358_44	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1537358_44	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1537358_44	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1537358_44	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_47	phrog_72	58.8	9.3e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537358_47	UniRef90_R5BGH3	130.0	6.77e-35	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1537358_47	1507.HMPREF0262_00432	100.0	2.42e-24	N/A	N/A
PHROG	UHGV-1537358_48	phrog_7838	110.9	1.2e-32	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537358_48	UniRef90_UPI001D07B780	361.0	0	RAD52 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1537358_48	1485543.JMME01000021_gene803	111.0	3.71e-28	N/A	N/A
Pfam	UHGV-1537358_48	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
structural_annotation	UHGV-1537358_48	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_49	phrog_674	78.4	3e-23	N/A	unknown function
UniRef90	UHGV-1537358_49	UniRef90_UPI001D090BA8	439.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537358_49	1415775.U729_15	97.1	1.24e-20	N/A	N/A
Pfam	UHGV-1537358_49	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1537358_49	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_50	phrog_7735	87.3	1.4e-25	excisionase	integration and excision
UniRef90	UHGV-1537358_50	UniRef90_A0A2S7ZGX8	96.3	6.24e-24	HTH_17 domain-containing protein	N/A
Pfam	UHGV-1537358_50	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1537358_50	PF12728,MF_01155,NF033787,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1537358_53	K22300	41.9	0.000000000021	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1537358_53	phrog_2967	69.8	3.8e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1537358_53	UniRef90_UPI0007511C0F	235.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1537358_53	1235798.C817_00620	115.0	2.4e-31	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1537358_53	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1537358_53	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1537358_53	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1537358_55	phrog_20936	109.5	1.4e-32	N/A	unknown function
UniRef90	UHGV-1537358_55	UniRef90_UPI001D078346	164.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1537358_55	861450.HMPREF0080_02020	57.0	0.0000000014	N/A	N/A
Pfam	UHGV-1537358_55	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1537358_55	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1537358_56	K14059	220.2	0	int; integrase	N/A
PHROG	UHGV-1537358_56	phrog_1	202.1	0	integrase	integration and excision
UniRef90	UHGV-1537358_56	UniRef90_UPI001D0692F2	668.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1537358_56	1232428.CAVO010000003_gene1025	272.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1537358_56	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1537358_56	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1537358_56	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1537358_56	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1537358_56	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A