UHGV-1541909 (vOTU-009551)

Viral Genome: UHGV-1541909

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1541909
vOTU ID	vOTU-009551
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0368590
Associated Biosample	SAMN04261229
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	97.13 (High-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.978
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	17.36
Jumbo Phage?	No

Genome Content
Length (bps)	71,917
GC Content	43.98%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	80
CDS Density	91%
Average CDS Length (bps)	818.33
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1541909_1	537011.PREVCOP_03832	80.9	1.69e-17	regulation of translation	N/A
COG	UHGV-1541909_1	COG0776	N/A	N/A	Bacterial nucleoid DNA-binding protein IHF-alpha	N/A
Pfam	UHGV-1541909_2	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1541909_2	PF04492,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-1541909_4	K17080	69.1	4.5e-20	PHB1; prohibitin 1	N/A
PHROG	UHGV-1541909_4	phrog_200	205.6	0	lipoprotein	other
UniRef90	UHGV-1541909_4	UniRef90_A0A3R6JWU3	437.0	0	PHB domain-containing protein	N/A
eggNOG-mapper	UHGV-1541909_4	1122621.ATZA01000001_gene1899	292.0	0	stress-induced mitochondrial fusion	N/A
Pfam	UHGV-1541909_4	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-1541909_4	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-1541909_4	PF01145,MF_01562,TIGR01932,COG0330	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_5	PF10623	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_7	phrog_8470	69.3	5.6e-20	N/A	unknown function
UniRef90	UHGV-1541909_7	UniRef90_A0A2V1IJY8	178.0	0	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-1541909_7	626522.GCWU000325_02735	178.0	0	N/A	N/A
Pfam	UHGV-1541909_7	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1541909_7	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_8	phrog_7445	69.2	5.6e-20	N/A	unknown function
UniRef90	UHGV-1541909_8	UniRef90_UPI0019591935	61.6	0.00000000112	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-1541909_8	1232449.BAHV02000018_gene1541	62.4	0.000000000142	PcfK-like protein	N/A
Pfam	UHGV-1541909_8	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-1541909_8	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_19	phrog_3	40.3	0.00000000011	transcriptional repressor	transcription regulation
UniRef90	UHGV-1541909_19	UniRef90_A0A412HHM5	150.0	2.8026e-45	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1541909_19	997884.HMPREF1068_03266	61.2	0.0000000000512	N/A	N/A
Pfam	UHGV-1541909_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1541909_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1541909_19	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_20	PF19495	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1541909_21	1121098.HMPREF1534_01130	63.9	0.00000000132	N/A	N/A
KOfam	UHGV-1541909_22	K05811	53.8	0.0000000000000026	yfiM; putative lipoprotein	N/A
COG	UHGV-1541909_22	COG5544	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_22	PF10043,NF008028,COG5544	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_25	phrog_10691	771.5	0	N/A	unknown function
UniRef90	UHGV-1541909_25	UniRef90_UPI001C395052	4687.0	0	strawberry notch C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1541909_25	1121441.AUCX01000032_gene3179	547.0	0	Methyltransferase small domain	N/A
Pfam	UHGV-1541909_25	PF18763	N/A	N/A	ddrB-like ParB superfamily domain	ddrB-ParB
Pfam	UHGV-1541909_25	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1541909_25	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1541909_25	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-1541909_27	phrog_16490	131.9	5e-39	N/A	unknown function
UniRef90	UHGV-1541909_27	UniRef90_A0A7M1RZU0	166.0	1.4013e-45	Spike protein/glycoprotein	N/A
eggNOG-mapper	UHGV-1541909_27	411901.BACCAC_01112	221.0	0	N/A	N/A
PHROG	UHGV-1541909_28	phrog_31654	83.5	2.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1541909_28	742725.HMPREF9450_02106	169.0	0	N/A	N/A
PHROG	UHGV-1541909_29	phrog_28898	127.3	1e-37	N/A	unknown function
eggNOG-mapper	UHGV-1541909_29	411901.BACCAC_01110	166.0	0	N/A	N/A
structural_annotation	UHGV-1541909_29	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_31	phrog_38431	137.0	4.19997e-41	N/A	unknown function
UniRef90	UHGV-1541909_31	UniRef90_R5U340	142.0	7.20001e-41	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1541909_31	762982.HMPREF9442_01205	140.0	6.93993e-41	N/A	N/A
eggNOG-mapper	UHGV-1541909_32	762982.HMPREF9442_01206	82.4	2.28e-18	N/A	N/A
UniRef90	UHGV-1541909_33	UniRef90_UPI001F36DCAA	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-1541909_33	1122985.HMPREF1991_01560	89.7	6.33e-20	N/A	N/A
Pfam	UHGV-1541909_33	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-1541909_33	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-1541909_34	K00986	130.0	2.1e-38	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1541909_34	phrog_1423	211.1	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1541909_34	UniRef90_UPI001C2C8EC1	566.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1541909_34	1122931.AUAE01000001_gene570	270.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-1541909_34	icity0040	100.0	3.3e-29	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1541909_34	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1541909_34	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1541909_34	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_35	PF05635,NF033474	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_36	PF10794,PF13620,TIGR04134,NF038094,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_37	phrog_892	52.0	6.1e-24	tail fiber protein	tail
structural_annotation	UHGV-1541909_38	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_40	phrog_26635	68.2	5.4e-20	N/A	unknown function
structural_annotation	UHGV-1541909_40	PF17236,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_41	phrog_22323	90.6	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1541909_41	1121098.HMPREF1534_01121	85.5	7.62e-17	N/A	N/A
PHROG	UHGV-1541909_42	phrog_156	183.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1541909_42	1121098.HMPREF1534_01127	356.0	0	N/A	N/A
structural_annotation	UHGV-1541909_42	PF16510,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_44	PF02368	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_47	phrog_2	68.5	4.5e-20	terminase large subunit	head and packaging
UniRef90	UHGV-1541909_47	UniRef90_UPI00192482D4	489.0	0	terminase	N/A
eggNOG-mapper	UHGV-1541909_47	1347393.HG726020_gene1832	439.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-1541909_47	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-1541909_47	PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_48	phrog_32516	261.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1541909_48	1121098.HMPREF1534_01101	256.0	0	N/A	N/A
structural_annotation	UHGV-1541909_48	PF11134,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_49	phrog_27246	44.6	0.0000000000018	N/A	unknown function
PHROG	UHGV-1541909_52	phrog_20732	140.0	1.10002e-41	N/A	unknown function
UniRef90	UHGV-1541909_52	UniRef90_A0A6G7X1I7	83.6	1.55e-17	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1541909_52	742727.HMPREF9447_04857	169.0	0	N/A	N/A
structural_annotation	UHGV-1541909_52	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1541909_53	K03791	195.9	0	K03791; putative chitinase	N/A
PHROG	UHGV-1541909_53	phrog_181	175.9	0	endolysin	lysis
UniRef90	UHGV-1541909_53	UniRef90_A0A353E7E4	275.0	0	Glyco_hydro_19_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-1541909_53	321846.PS417_05795	153.0	7.00649e-45	hmm pf00182	N/A
COG	UHGV-1541909_53	COG3179	N/A	N/A	Chitinase, GH19 family	N/A
structural_annotation	UHGV-1541909_53	PF00182,COG3179	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1541909_54	679190.HMPREF0650_1967	97.1	5.72e-24	N/A	N/A
UniRef90	UHGV-1541909_55	UniRef90_A0A3E5E9F8	145.0	2.158e-43	DNA-binding protein	N/A
Pfam	UHGV-1541909_55	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1541909_55	PF05930,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_57	phrog_625	62.2	7.2e-18	N/A	unknown function
UniRef90	UHGV-1541909_57	UniRef90_A0A6A7VVD8	199.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1541909_57	1227266.HMPREF1551_00545	58.2	0.00000000157	N/A	N/A
UniRef90	UHGV-1541909_58	UniRef90_UPI001C390AB8	121.0	5.04e-35	N/A	N/A
structural_annotation	UHGV-1541909_58	PF11195	N/A	N/A	N/A	N/A
KOfam	UHGV-1541909_61	K24213	49.5	0.000000000000046	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1541909_61	phrog_4433	200.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1541909_61	1122985.HMPREF1991_02253	118.0	8.1e-30	cell wall organization	N/A
Pfam	UHGV-1541909_61	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1541909_61	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1541909_61	NF007410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_63	PF19716	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_67	PF18195,COG5475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1541909_70	PF20338	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_71	phrog_270	60.0	6.5e-17	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1541909_71	1166018.FAES_3914	53.9	0.00000167	N/A	N/A
structural_annotation	UHGV-1541909_72	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_73	phrog_392	146.2	2.49431e-43	metal-dependent hydrolase	other
UniRef90	UHGV-1541909_73	UniRef90_A0A646FRH1	330.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1541909_73	449673.BACSTE_02214	155.0	4.34403e-44	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-1541909_73	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1541909_73	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1541909_73	PF02112,MF_00653,TIGR03307,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-1541909_74	K07455	157.4	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1541909_74	phrog_148	164.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1541909_74	UniRef90_A0A646FUA9	450.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1541909_74	445970.ALIPUT_02693	209.0	0	Recombinase, phage RecT family	N/A
Pfam	UHGV-1541909_74	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1541909_74	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1541909_74	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1541909_74	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1541909_75	K19171	94.7	7.1e-28	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1541909_75	phrog_77	192.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1541909_75	UniRef90_A0A646FTS8	640.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1541909_75	1392486.JIAF01000004_gene2636	214.0	0	AAA domain	N/A
PADLOC	UHGV-1541909_75	AAA_15	49.8	0.000000000000013	N/A	N/A
Pfam	UHGV-1541909_75	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1541909_75	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1541909_75	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_76	phrog_5034	115.8	2.4e-34	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1541909_76	UniRef90_A0A415VFZ7	230.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1541909_76	1347393.HG726021_gene512	119.0	3.51e-32	Bacteriophage Lambda NinG protein	N/A
Pfam	UHGV-1541909_76	PF05766	N/A	N/A	Bacteriophage Lambda NinG protein	NinG
COG	UHGV-1541909_76	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1541909_76	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-1541909_78	phrog_16858	45.0	0.0000000000013	N/A	unknown function
UniRef90	UHGV-1541909_79	UniRef90_A0A646FWN7	74.7	0.00000000000000808	Helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1541909_79	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1541909_79	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1541909_80	K04763	88.1	1.3e-25	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1541909_80	phrog_1	115.2	7.5e-34	integrase	integration and excision
UniRef90	UHGV-1541909_80	UniRef90_A0A3R6PLE7	517.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1541909_80	742727.HMPREF9447_04802	215.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-1541909_80	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-1541909_80	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-1541909_80	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1541909_80	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1541909_80	PF00589,PF13102,PF17293,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A