UHGV-1851181 (vOTU-067230)

Viral Genome: UHGV-1851181

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1851181
vOTU ID	vOTU-067230
Representative Genome?	Yes
Source	DEVoC
Original Genome ID	ViralSequence312
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	95.01 (High-quality)
Trimmed?	No
CheckV Viral Markers	24
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9804
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	44.39
Jumbo Phage?	No

Genome Content
Length (bps)	47,270
GC Content	38.14%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	77
CDS Density	93%
Average CDS Length (bps)	569.46
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.01)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1851181_1	phrog_1909	103.8	1.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1851181_1	1458697.W6E8E8_9CAUD	59.7	0.0000000821	N/A	N/A
KOfam	UHGV-1851181_2	K09882	140.4	1.6e-41	cobS; cobaltochelatase CobS [EC:6.6.1.2]	N/A
PHROG	UHGV-1851181_2	phrog_249	206.9	0	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1851181_2	UniRef90_A0A1W1UZM7	267.0	0	AAA domain (Dynein-related subfamily)	N/A
eggNOG-mapper	UHGV-1851181_2	330395.Q30L55_9CAUD	173.0	0	ATPase activity	N/A
Pfam	UHGV-1851181_2	PF07728	N/A	N/A	AAA domain (dynein-related subfamily)	AAA_5
structural_annotation	UHGV-1851181_2	PF07728,MF_00016,TIGR01650,COG0714	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1851181_3	411473.RUMCAL_00313	59.7	0.00000000345	N/A	N/A
PHROG	UHGV-1851181_4	phrog_6466	69.7	4.1e-20	DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1851181_4	UniRef90_A0A843GQD5	97.8	2.76e-24	DNA_ligase_aden domain-containing protein	N/A
eggNOG-mapper	UHGV-1851181_4	691965.D4P7L3_9CAUD	54.7	0.000000321	helicase activity	N/A
PHROG	UHGV-1851181_8	phrog_2002	49.7	0.000000000000013	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1851181_8	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1851181_9	PF21138,NF009630,COG2375	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1851181_12	PF10922	N/A	N/A	N/A	N/A
KOfam	UHGV-1851181_13	K03469	162.4	0	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1851181_13	phrog_531	147.3	6.72623e-44	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1851181_13	UniRef90_A0A7X8U570	135.0	1.15e-37	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1851181_13	632335.Calkr_1327	127.0	1.14e-35	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1851181_13	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1851181_13	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1851181_13	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1851181_14	PF14084	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_16	phrog_2412	50.1	0.000000000000047	N/A	unknown function
PHROG	UHGV-1851181_18	phrog_16126	84.3	1.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1851181_18	665950.HMPREF1025_01978	63.9	0.0000000000337	N/A	N/A
PHROG	UHGV-1851181_21	phrog_2245	71.2	1.7e-20	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-1851181_21	665950.HMPREF1025_01374	52.0	0.000000451	N/A	N/A
PHROG	UHGV-1851181_22	phrog_930	131.1	8.8e-39	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1851181_22	UniRef90_A0A4D6A7C4	140.0	1.9e-38	DNA modification methylase	N/A
eggNOG-mapper	UHGV-1851181_22	411459.RUMOBE_01044	107.0	8.15e-26	N/A	N/A
PADLOC	UHGV-1851181_22	MTase_II_00015	71.3	2e-20	Type II methyltransferase	RM
Pfam	UHGV-1851181_22	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1851181_22	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1851181_22	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_23	phrog_842	57.7	2.4e-16	beta-glucosyl-HMC-alpha-glucosyltransferase	other
eggNOG-mapper	UHGV-1851181_23	1236514.BAKL01000015_gene1638	224.0	0	N/A	N/A
Pfam	UHGV-1851181_23	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-1851181_23	PF20691,MF_00057,NF038299,COG1216	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1851181_27	658655.HMPREF0988_00863	60.8	0.00000000408	N/A	N/A
KOfam	UHGV-1851181_28	K06909	315.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1851181_28	phrog_3717	121.8	4.80645e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1851181_28	UniRef90_A0A349YI29	541.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1851181_28	1443122.Z958_p0035	463.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1851181_28	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1851181_28	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1851181_28	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1851181_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-1851181_30	phrog_4105	86.0	3.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1851181_30	411459.RUMOBE_00911	144.0	1.06499e-43	N/A	N/A
PHROG	UHGV-1851181_31	phrog_443	57.4	4.3e-16	holin	lysis
UniRef90	UHGV-1851181_31	UniRef90_UPI000C75746C	105.0	2.87e-28	holin	N/A
eggNOG-mapper	UHGV-1851181_31	626523.GCWU000342_01012	89.7	1.33e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1851181_31	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1851181_31	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1851181_32	K07273	193.2	0	acm; lysozyme	N/A
PHROG	UHGV-1851181_32	phrog_291	206.0	0	endolysin	lysis
UniRef90	UHGV-1851181_32	UniRef90_A0A1E8W190	421.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1851181_32	521003.COLINT_02363	315.0	0	CW_7 repeat	N/A
Pfam	UHGV-1851181_32	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1851181_32	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-1851181_32	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1851181_32	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1851181_32	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_33	phrog_64	86.0	3.2e-25	portal protein	head and packaging
UniRef90	UHGV-1851181_33	UniRef90_A0A843GSM3	350.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1851181_33	1211817.CCAT010000049_gene2492	115.0	1.64e-24	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1851181_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1851181_33	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_34	phrog_1657	196.1	0	head morphogenesis	head and packaging
UniRef90	UHGV-1851181_34	UniRef90_A0A1G9U003	152.0	2.15e-40	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-1851181_34	1567015.A0A0A7RUI1_9VIRU	141.0	4.11e-35	Phage Mu protein F like protein	N/A
structural_annotation	UHGV-1851181_36	TIGR00310	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_37	phrog_2303	49.0	0.00000000000014	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1851181_37	1231057.AMGD01000018_gene3620	61.2	0.000000012	N/A	N/A
structural_annotation	UHGV-1851181_37	MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_38	phrog_909	76.7	2.5e-22	major head protein	head and packaging
structural_annotation	UHGV-1851181_38	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_39	phrog_29	251.8	0	major head protein	head and packaging
UniRef90	UHGV-1851181_39	UniRef90_UPI00082C04A5	431.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1851181_39	1158612.I580_01912	317.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1851181_39	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1851181_39	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1851181_40	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_41	phrog_4020	71.4	1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1851181_41	445335.CBN_3083	65.5	0.000000000000843	N/A	N/A
PHROG	UHGV-1851181_42	phrog_8435	61.3	1.5e-17	N/A	unknown function
structural_annotation	UHGV-1851181_42	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1851181_43	1443122.Z958_05860	95.1	9.28e-24	N/A	N/A
Pfam	UHGV-1851181_43	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1851181_43	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_44	phrog_7585	76.9	3.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1851181_44	1196322.A370_04060	71.6	0.0000000000000295	N/A	N/A
structural_annotation	UHGV-1851181_44	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_45	phrog_6686	137.1	1.10001e-40	tail tube protein	tail
UniRef90	UHGV-1851181_45	UniRef90_A0A1C6KI12	171.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1851181_45	748727.CLJU_c31250	97.8	2.02e-21	N/A	N/A
structural_annotation	UHGV-1851181_45	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_46	phrog_6280	133.5	1e-39	N/A	unknown function
UniRef90	UHGV-1851181_46	UniRef90_UPI001AA892DF	113.0	1.19e-29	esterase	N/A
eggNOG-mapper	UHGV-1851181_46	445335.CBN_3078	115.0	5.4e-31	N/A	N/A
PHROG	UHGV-1851181_47	phrog_6541	56.4	3.9e-16	N/A	unknown function
PHROG	UHGV-1851181_48	phrog_1533	534.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1851181_48	UniRef90_A0A1H4RSW2	446.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-1851181_48	1410670.JHXF01000015_gene2302	464.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1851181_48	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1851181_48	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1851181_48	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1851181_48	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_49	phrog_36410	48.1	0.00000000000013	N/A	unknown function
UniRef90	UHGV-1851181_49	UniRef90_UPI0012921E64	77.4	0.00000000000138	phage tail family protein	N/A
eggNOG-mapper	UHGV-1851181_49	864178.E2ELJ6_9CAUD	63.2	0.0000000166	Phage tail protein	N/A
structural_annotation	UHGV-1851181_49	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_50	phrog_538	195.6	0	minor tail protein	tail
UniRef90	UHGV-1851181_50	UniRef90_A0A1S2L9H6	109.0	4.84e-23	Siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1851181_50	1034347.CAHJ01000045_gene552	110.0	2.21e-23	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1851181_50	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1851181_50	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_51	phrog_1220	153.3	0	head protein	head and packaging
UniRef90	UHGV-1851181_51	UniRef90_UPI0005821E94	106.0	9.85e-22	methyl-accepting chemotaxis protein	N/A
eggNOG-mapper	UHGV-1851181_51	536232.CLM_2920	107.0	4.58e-23	N/A	N/A
PHROG	UHGV-1851181_54	phrog_36	48.4	0.00000000000021	transcriptional regulator	transcription regulation
Pfam	UHGV-1851181_54	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1851181_54	PF04545,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_57	phrog_16490	60.9	4e-20	N/A	unknown function
eggNOG-mapper	UHGV-1851181_57	476272.RUMHYD_01770	104.0	9.29e-25	N/A	N/A
eggNOG-mapper	UHGV-1851181_58	1408437.JNJN01000043_gene802	55.8	0.0000000322	N/A	N/A
structural_annotation	UHGV-1851181_60	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1851181_64	PF06003,MF_01077,NF037951,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-1851181_66	K02316	132.4	2.9e-39	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1851181_66	phrog_47	141.1	9.99967e-42	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1851181_66	UniRef90_A0A843GN62	301.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-1851181_66	1005057.BUAMB_052	77.8	0.000000000000535	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
PADLOC	UHGV-1851181_66	drt-UG29	49.3	6.2e-28	DRT	DRT
Pfam	UHGV-1851181_66	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1851181_66	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-1851181_66	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1851181_66	PF01807,PF13155,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_68	phrog_1607	41.9	0.00000000002	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1851181_68	PF08804	N/A	N/A	N/A	N/A
KOfam	UHGV-1851181_69	K02337	751.0	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-1851181_69	phrog_405	678.2	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1851181_69	UniRef90_A0A843GPT9	914.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1851181_69	224324.aq_1008	439.0	0	TIGRFAM DNA polymerase III, alpha subunit	N/A
Pfam	UHGV-1851181_69	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-1851181_69	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-1851181_69	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-1851181_69	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
NCBIFam	UHGV-1851181_69	TIGR00594.1	N/A	N/A	DNA polymerase III subunit alpha	N/A
COG	UHGV-1851181_69	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-1851181_69	PF07733,PF02811,PF17657,PF14579,MF_01902,TIGR00594,COG0587	N/A	N/A	N/A	N/A
KOfam	UHGV-1851181_71	K03553	180.6	0	recA; recombination protein RecA	N/A
PHROG	UHGV-1851181_71	phrog_97	179.9	0	UvsX-like recombinase	other
UniRef90	UHGV-1851181_71	UniRef90_UPI00195C3251	148.0	2.21e-38	recombinase RecA	N/A
eggNOG-mapper	UHGV-1851181_71	469616.FMAG_01147	145.0	5.79e-38	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-1851181_71	PF00154	N/A	N/A	recA bacterial DNA recombination protein	RecA
COG	UHGV-1851181_71	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1851181_71	PF00154,MF_00268,TIGR02012,COG0468	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1851181_72	PF01775,MF_00273,NF010188,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_73	phrog_1706	60.3	3.4e-17	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1851181_73	UniRef90_A0A5D3IBF8	60.8	0.000000302	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1851181_73	1499968.TCA2_4616	65.1	0.00000000213	DNA catabolic process, exonucleolytic	N/A
COG	UHGV-1851181_73	COG1468	N/A	N/A	CRISPR/Cas system-associated exonuclease Cas4, RecB family	N/A
structural_annotation	UHGV-1851181_73	PF01930,MF_03030,TIGR00372,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-1851181_75	K03427	68.0	1.4e-19	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1851181_75	phrog_5696	261.4	0	N/A	unknown function
UniRef90	UHGV-1851181_75	UniRef90_A0A1Q6KSK2	204.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1851181_75	665950.HMPREF1025_01959	201.0	0	N-6 DNA Methylase	N/A
Pfam	UHGV-1851181_75	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1851181_75	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1851181_75	COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-1851181_76	phrog_159	50.9	0.000000000000011	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1851181_76	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A