UHGV-1857399 (vOTU-025399)

Viral Genome: UHGV-1857399

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1857399
vOTU ID	vOTU-025399
Representative Genome?	Yes
Source	DEVoC
Original Genome ID	ViralSequence559
Associated Biosample	SAMN18794223
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	89.88 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9794
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	33.76
Jumbo Phage?	No

Genome Content
Length (bps)	36,982
GC Content	52.06%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	69
CDS Density	89%
Average CDS Length (bps)	478.22
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1857399_2	phrog_25732	62.3	3.8e-18	N/A	unknown function
structural_annotation	UHGV-1857399_2	NF011227	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_3	phrog_28782	102.5	3.2e-30	N/A	unknown function
UniRef90	UHGV-1857399_3	UniRef90_A0A316S3E3	418.0	0	Reductase	N/A
eggNOG-mapper	UHGV-1857399_3	1235835.C814_01169	368.0	0	N/A	N/A
COG	UHGV-1857399_3	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-1857399_5	phrog_38832	42.7	0.0000000000063	N/A	unknown function
PHROG	UHGV-1857399_9	phrog_1934	134.3	4.39999e-40	N/A	unknown function
UniRef90	UHGV-1857399_9	UniRef90_UPI0018AC0226	310.0	0	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-1857399_9	397290.C810_01488	162.0	0	zinc-finger-containing domain	N/A
Pfam	UHGV-1857399_9	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-1857399_9	PF11672	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_11	phrog_236	75.0	1.7e-21	nucleotide kinase	other
UniRef90	UHGV-1857399_11	UniRef90_UPI0013022309	109.0	4.64e-29	N/A	N/A
eggNOG-mapper	UHGV-1857399_11	1125712.HMPREF1316_2379	77.0	4.21e-17	N/A	N/A
Pfam	UHGV-1857399_11	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-1857399_12	phrog_25385	65.8	6.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1857399_12	748224.HMPREF9436_03077	69.7	0.0000000000000783	N/A	N/A
eggNOG-mapper	UHGV-1857399_13	742738.HMPREF9460_02503	166.0	0	N/A	N/A
structural_annotation	UHGV-1857399_13	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-1857399_14	UniRef90_UPI0018A8F249	254.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1857399_14	1235790.C805_00037	137.0	1.56e-39	N/A	N/A
structural_annotation	UHGV-1857399_14	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-1857399_15	K06909	126.9	1.9e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1857399_15	phrog_10250	167.5	0	N/A	unknown function
UniRef90	UHGV-1857399_15	UniRef90_UPI0018A99FCF	782.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1857399_15	476272.RUMHYD_01756	481.0	0	N/A	N/A
Pfam	UHGV-1857399_15	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1857399_15	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1857399_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1857399_15	PF04466,PF20441,MF_04148,TIGR01547,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_16	phrog_64	153.7	0	portal protein	head and packaging
UniRef90	UHGV-1857399_16	UniRef90_UPI0018A8A301	783.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1857399_16	673376.F2VHW1_9CAUD	216.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1857399_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1857399_16	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_17	phrog_2468	118.8	4.6e-35	head morphogenesis	head and packaging
UniRef90	UHGV-1857399_17	UniRef90_A0A1C7FSE6	598.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1857399_17	1504822.CCNO01000013_gene286	163.0	1.44053e-42	cell adhesion	N/A
Pfam	UHGV-1857399_17	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1857399_17	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1857399_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1857399_17	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_18	phrog_5	89.0	6.2e-26	tail completion or Neck1 protein	connector
UniRef90	UHGV-1857399_18	UniRef90_UPI0018AA0B5A	259.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1857399_18	1280685.AUKC01000004_gene1630	114.0	9.2e-31	N/A	N/A
Pfam	UHGV-1857399_18	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1857399_18	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1857399_18	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1857399_22	UniRef90_A0A1Y3R5J8	80.9	5.65e-19	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1857399_22	1160721.RBI_I00206	49.3	0.000000314	N/A	N/A
structural_annotation	UHGV-1857399_22	PF10723	N/A	N/A	N/A	N/A
UniRef90	UHGV-1857399_23	UniRef90_A0A6B9SU02	127.0	2.98e-33	Fibronectin autolysin	N/A
PHROG	UHGV-1857399_24	phrog_544	126.3	2.4e-37	major head protein	head and packaging
UniRef90	UHGV-1857399_24	UniRef90_A0A1C6B5R0	330.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1857399_24	476272.RUMHYD_01776	315.0	0	N/A	N/A
structural_annotation	UHGV-1857399_24	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1857399_25	1226322.HMPREF1545_00051	189.0	0	N/A	N/A
PHROG	UHGV-1857399_27	phrog_17977	86.2	2.5e-25	N/A	unknown function
UniRef90	UHGV-1857399_27	UniRef90_A0A285PT57	113.0	3.92e-30	Phage head-tail joining protein	N/A
structural_annotation	UHGV-1857399_27	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_28	phrog_1233	94.1	1.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1857399_28	1232443.BAIA02000078_gene33	151.0	0	N/A	N/A
PHROG	UHGV-1857399_29	phrog_17405	42.5	0.0000000000094	head protein	head and packaging
structural_annotation	UHGV-1857399_29	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_30	phrog_885	102.1	4.2e-30	major tail protein	tail
UniRef90	UHGV-1857399_30	UniRef90_UPI000BE41A82	68.9	0.000000000121	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1857399_30	1111121.HMPREF1247_0789	187.0	0	N/A	N/A
structural_annotation	UHGV-1857399_30	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_31	phrog_18646	64.7	1.3e-18	N/A	unknown function
PHROG	UHGV-1857399_33	phrog_58	145.7	2.66247e-44	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1857399_33	665950.HMPREF1025_02660	217.0	0	phage tail tape measure protein	N/A
COG	UHGV-1857399_33	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1857399_34	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_35	phrog_6616	47.5	0.0000000000001	tail protein	tail
eggNOG-mapper	UHGV-1857399_35	1235797.C816_04180	179.0	0	N/A	N/A
structural_annotation	UHGV-1857399_35	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_36	phrog_7121	68.3	4.6e-20	tail fiber protein	tail
UniRef90	UHGV-1857399_36	UniRef90_A0A856HZ25	292.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1857399_36	1235797.C816_04179	179.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-1857399_36	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1857399_36	PF07902,NF041249	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1857399_38	1232443.BAIA02000078_gene14	52.8	0.0000091	nuclear chromosome segregation	N/A
COG	UHGV-1857399_38	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1857399_39	phrog_38707	92.9	2.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1857399_39	742738.HMPREF9460_03963	193.0	0	tail collar domain protein	N/A
COG	UHGV-1857399_39	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1857399_42	PF09682	N/A	N/A	N/A	N/A
KOfam	UHGV-1857399_43	K01447	69.7	5.3e-20	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1857399_43	phrog_15001	175.2	0	endolysin	lysis
UniRef90	UHGV-1857399_43	UniRef90_UPI001F2CBA52	306.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1857399_43	1378168.N510_01539	278.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1857399_43	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1857399_43	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1857399_43	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_45	phrog_937	51.1	0.000000000000015	hemolysin	other
eggNOG-mapper	UHGV-1857399_45	445972.ANACOL_01873	53.9	0.0000000781	N/A	N/A
UniRef90	UHGV-1857399_46	UniRef90_U2R3E6	73.2	0.00000000000000208	KORA domain-containing protein	N/A
structural_annotation	UHGV-1857399_46	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1857399_47	1235798.C817_03620	98.2	3.77e-25	N/A	N/A
PHROG	UHGV-1857399_48	phrog_1281	113.4	1.5e-33	N/A	unknown function
UniRef90	UHGV-1857399_48	UniRef90_A0A0W7TLZ5	237.0	0	N/A	N/A
eggNOG-mapper	UHGV-1857399_48	1235798.C817_03619	223.0	0	N/A	N/A
Pfam	UHGV-1857399_48	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1857399_48	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1857399_48	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_50	phrog_3754	106.4	9e-32	N/A	unknown function
eggNOG-mapper	UHGV-1857399_50	1226322.HMPREF1545_00073	214.0	0	N/A	N/A
PHROG	UHGV-1857399_51	phrog_21718	141.9	2.90069e-42	N/A	unknown function
UniRef90	UHGV-1857399_51	UniRef90_A0A285PT36	62.8	0.00000000167	Consensus disorder prediction	N/A
eggNOG-mapper	UHGV-1857399_51	397290.C810_05210	73.6	0.0000000000000243	N/A	N/A
PHROG	UHGV-1857399_52	phrog_22984	127.4	3.9e-38	N/A	unknown function
PHROG	UHGV-1857399_53	phrog_16490	166.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1857399_53	658655.HMPREF0988_00917	218.0	0	N/A	N/A
PHROG	UHGV-1857399_54	phrog_20016	127.8	4.1e-38	N/A	unknown function
UniRef90	UHGV-1857399_54	UniRef90_A0A285PT46	110.0	3.51e-28	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1857399_54	1485543.JMME01000025_gene2458	100.0	6.85e-25	N/A	N/A
structural_annotation	UHGV-1857399_54	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_55	phrog_28802	61.6	3.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1857399_56	1226322.HMPREF1545_00079	156.0	0	N/A	N/A
KOfam	UHGV-1857399_57	K14059	145.1	7.80523e-43	int; integrase	N/A
PHROG	UHGV-1857399_57	phrog_1	154.2	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-1857399_57	UniRef90_A0A1C5W824	510.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1857399_57	693746.OBV_41260	275.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1857399_57	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1857399_57	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1857399_57	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_58	phrog_17982	73.5	2.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-1857399_58	1284686.HMPREF1630_01985	85.5	1.59e-16	N/A	N/A
Pfam	UHGV-1857399_58	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-1857399_58	PF14020	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1857399_59	1121344.JHZO01000003_gene989	57.4	0.00000000783	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-1857399_59	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
COG	UHGV-1857399_59	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1857399_59	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_60	phrog_8	52.4	0.000000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1857399_60	UniRef90_A0A096BAN9	75.1	2.14e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1857399_60	411459.RUMOBE_00961	55.5	0.00000000918	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1857399_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1857399_60	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1857399_60	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1857399_61	UniRef90_A0A8D9PDM8	62.8	0.0000000000135	Pyocin activator protein	N/A
structural_annotation	UHGV-1857399_61	PF11112,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1857399_65	PF14634	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_67	phrog_2872	213.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1857399_67	UniRef90_UPI00058FD242	297.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1857399_67	1345695.CLSA_c30180	301.0	0	AAA domain	N/A
structural_annotation	UHGV-1857399_67	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1857399_68	phrog_18107	54.3	0.000000000000001	N/A	unknown function
UniRef90	UHGV-1857399_68	UniRef90_R6I207	93.6	1.1e-20	PF05037 family protein	N/A
eggNOG-mapper	UHGV-1857399_68	903814.ELI_1274	136.0	2.77e-38	N/A	N/A
structural_annotation	UHGV-1857399_68	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-1857399_69	K02316	67.8	1.8e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1857399_69	phrog_11992	103.7	2.5e-30	N/A	unknown function
UniRef90	UHGV-1857399_69	UniRef90_UPI000309EAF0	103.0	1.24e-26	CHC2 zinc finger domain-containing protein	N/A
eggNOG-mapper	UHGV-1857399_69	1007096.BAGW01000023_gene150	103.0	2.08e-27	CHC2 zinc finger	N/A
PADLOC	UHGV-1857399_69	drt-UG29	59.6	3.9e-17	DRT	DRT
Pfam	UHGV-1857399_69	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1857399_69	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A