UHGV-1886250 (vOTU-068521)

Viral Genome: UHGV-1886250

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1886250
vOTU ID	vOTU-068521
Representative Genome?	Yes
Source	IMGVR4
Original Genome ID	3300000294\|EM326_1001229
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	97.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	10
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9787
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31.9
Jumbo Phage?	No

Genome Content
Length (bps)	41,458
GC Content	49.68%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	63
CDS Density	90%
Average CDS Length (bps)	593.76
Total tRNA Genes	3
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1886250_1	UniRef90_A0A432JNU8	105.0	9.74e-28	Long-chain fatty acid--CoA ligase (Fragment)	N/A
eggNOG-mapper	UHGV-1886250_1	1033732.CAHI01000015_gene336	159.0	1.4013e-44	AMP-binding enzyme	N/A
COG	UHGV-1886250_1	COG1022	N/A	N/A	Long-chain acyl-CoA synthetase (AMP-forming)	N/A
KOfam	UHGV-1886250_2	K04763	54.8	0.0000000000000016	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1886250_2	phrog_1	70.7	2.4e-20	integrase	integration and excision
UniRef90	UHGV-1886250_2	UniRef90_UPI001D07DFD5	597.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1886250_2	742766.HMPREF9455_03139	372.0	0	Phage integrase SAM-like domain	N/A
Pfam	UHGV-1886250_2	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-1886250_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1886250_2	PF13102,PF17293,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1886250_3	1120966.AUBU01000018_gene232	55.5	0.000000431	N/A	N/A
structural_annotation	UHGV-1886250_3	PF05862	N/A	N/A	N/A	N/A
KOfam	UHGV-1886250_4	K01356	40.3	0.000000000053	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1886250_4	phrog_4	87.0	2.8e-25	transcriptional repressor	transcription regulation
UniRef90	UHGV-1886250_4	UniRef90_A0A845PBF9	207.0	0	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1886250_4	1227276.HMPREF9148_01940	174.0	0	Transcriptional regulator	N/A
Pfam	UHGV-1886250_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1886250_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1886250_4	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
PHROG	UHGV-1886250_5	phrog_17289	50.9	0.000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-1886250_5	1235788.C802_00047	54.3	0.0000000318	N/A	N/A
UniRef90	UHGV-1886250_13	UniRef90_UPI0018977E4B	206.0	0	Rad52/Rad22 family DNA repair protein	N/A
Pfam	UHGV-1886250_13	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1886250_13	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1886250_13	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1886250_15	1121100.JCM6294_521	58.2	0.000000000863	N/A	N/A
PHROG	UHGV-1886250_16	phrog_72	58.0	1.9e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1886250_16	1122991.BAIZ01000025_gene1850	147.0	1.62551e-43	N/A	N/A
structural_annotation	UHGV-1886250_16	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1886250_17	phrog_2562	108.4	7.8e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1886250_17	UniRef90_UPI000B1F837B	290.0	0	N/A	N/A
eggNOG-mapper	UHGV-1886250_17	445970.ALIPUT_01604	212.0	0	N/A	N/A
Pfam	UHGV-1886250_17	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1886250_17	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1886250_17	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-1886250_20	K00390	70.2	3.4e-20	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1886250_20	phrog_424	117.0	1.6e-34	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1886250_20	UniRef90_UPI000D8D5A98	326.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1886250_20	742817.HMPREF9449_01776	123.0	4.78e-31	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1886250_20	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1886250_20	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1886250_20	PF01507,MF_00064,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1886250_21	phrog_15937	93.2	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1886250_21	357276.EL88_12685	65.5	0.000000000000182	N/A	N/A
structural_annotation	UHGV-1886250_21	NF041858	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1886250_24	742725.HMPREF9450_02087	103.0	2.07e-26	N/A	N/A
PHROG	UHGV-1886250_25	phrog_874	71.0	1.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1886250_25	1121098.HMPREF1534_01095	142.0	3.03e-39	N/A	N/A
structural_annotation	UHGV-1886250_25	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
UniRef90	UHGV-1886250_26	UniRef90_A0A374TCN1	52.0	0.00000052	Fructan hydrolase	N/A
PHROG	UHGV-1886250_28	phrog_229	99.9	2.7e-29	MazG-like pyrophosphatase	other
UniRef90	UHGV-1886250_28	UniRef90_A0A095Z6H0	145.0	1.05994e-41	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1886250_28	1236504.HMPREF2132_01780	145.0	1.77965e-42	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1886250_28	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1886250_28	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1886250_28	PF03819,MF_01020,NF002747,COG1694	N/A	N/A	N/A	N/A
UniRef90	UHGV-1886250_38	UniRef90_A0A345MT39	112.0	6.16e-27	Putative tail protein	N/A
eggNOG-mapper	UHGV-1886250_39	445970.ALIPUT_01633	63.5	0.00000000000821	Bacterial dnaA protein helix-turn-helix	N/A
Pfam	UHGV-1886250_40	PF20647	N/A	N/A	N/A	DUF6808
structural_annotation	UHGV-1886250_40	PF20647	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1886250_41	679935.Alfi_2719	85.9	2.68e-19	N/A	N/A
KOfam	UHGV-1886250_42	K01448	86.7	3.1e-25	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1886250_42	phrog_435	115.1	9.1e-34	endolysin	lysis
UniRef90	UHGV-1886250_42	UniRef90_A0A1Y3VF16	368.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1886250_42	679935.Alfi_2718	239.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1886250_42	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1886250_42	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1886250_42	PF01520,TIGR02883,COG0860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1886250_45	PF10043,NF008028	N/A	N/A	N/A	N/A
PHROG	UHGV-1886250_46	phrog_30034	87.1	2.3e-25	N/A	unknown function
UniRef90	UHGV-1886250_46	UniRef90_A0A3D1XGA4	121.0	1.01e-31	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1886250_46	478749.BRYFOR_07638	88.6	5.81e-20	N/A	N/A
structural_annotation	UHGV-1886250_47	PF00354	N/A	N/A	N/A	N/A
KOfam	UHGV-1886250_48	K19721	76.3	1.6e-22	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1886250_48	phrog_366	82.7	6.6e-24	tail fiber protein	tail
Pfam	UHGV-1886250_48	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-1886250_50	phrog_21217	86.7	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1886250_50	762984.HMPREF9445_00181	89.4	1.67e-19	N/A	N/A
PHROG	UHGV-1886250_51	phrog_14295	138.8	3.20001e-41	N/A	unknown function
eggNOG-mapper	UHGV-1886250_51	1235803.C825_02656	243.0	0	N/A	N/A
COG	UHGV-1886250_51	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1886250_52	phrog_33698	109.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1886250_52	742767.HMPREF9456_03372	176.0	5.26888e-43	N/A	N/A
Pfam	UHGV-1886250_52	PF08884	N/A	N/A	Flagellin D3 domain	Flagellin_D3
structural_annotation	UHGV-1886250_53	PF19266,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1886250_55	PF05561	N/A	N/A	N/A	N/A
PHROG	UHGV-1886250_59	phrog_10	138.1	8.00001e-41	major head protein	head and packaging
UniRef90	UHGV-1886250_59	UniRef90_UPI00068249D9	370.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1886250_59	449673.BACSTE_00580	155.0	6.17e-40	Phage capsid family	N/A
Pfam	UHGV-1886250_59	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1886250_59	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1886250_59	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1886250_59	PF05065,MF_04113,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1886250_60	K06904	114.9	1e-33	N/A	N/A
PHROG	UHGV-1886250_60	phrog_80	110.8	1.8e-32	head maturation protease	head and packaging
UniRef90	UHGV-1886250_60	UniRef90_UPI000B385EC9	239.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1886250_60	449673.BACSTE_00581	151.0	1.9394e-42	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1886250_60	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1886250_60	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1886250_60	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1886250_60	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1886250_61	phrog_12	76.6	2.3e-22	portal protein	head and packaging
UniRef90	UHGV-1886250_61	UniRef90_UPI00111ECBEF	125.0	2.34e-28	phage portal protein	N/A
eggNOG-mapper	UHGV-1886250_61	449673.BACSTE_00582	99.4	7.3e-20	Phage portal protein	N/A
Pfam	UHGV-1886250_61	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1886250_61	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1886250_62	K06909	181.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1886250_62	phrog_5653	80.0	2.4e-23	terminase large subunit	head and packaging
UniRef90	UHGV-1886250_62	UniRef90_A0A497PCX3	271.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1886250_62	313596.RB2501_01375	221.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1886250_62	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1886250_62	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-1886250_62	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1886250_62	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1886250_63	phrog_606	85.7	5.7e-25	terminase small subunit	head and packaging
UniRef90	UHGV-1886250_63	UniRef90_A0A496D5G8	83.2	6.53e-17	DNA packaging protein	N/A
eggNOG-mapper	UHGV-1886250_63	483215.BACFIN_07524	72.4	0.000000000000128	DNA-packaging protein gp3	N/A
Pfam	UHGV-1886250_63	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package