UHGV-1945945 (vOTU-137926)

Viral Genome: UHGV-1945945

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1945945
vOTU ID	vOTU-137926
Representative Genome?	Yes
Source	IMGVR4
Original Genome ID	3300008520\|Ga0111044_100531\|provirus_1_46639
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	74.62 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	15
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.978
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	33.09
Jumbo Phage?	No

Genome Content
Length (bps)	46,639
GC Content	39.79%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	69
CDS Density	93%
Average CDS Length (bps)	625.52
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 74.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1945945_1	357276.EL88_11460	77.0	8.75e-18	N/A	N/A
KOfam	UHGV-1945945_2	K07319	94.6	8.7e-28	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1945945_2	phrog_16	225.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1945945_2	UniRef90_I9RH12	1655.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1945945_2	357276.EL88_11455	1655.0	0	DNA methylase	N/A
PADLOC	UHGV-1945945_2	MTase_II_00157	41.7	0.00000000000002	Type II methyltransferase	RM
Pfam	UHGV-1945945_2	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
Pfam	UHGV-1945945_2	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1945945_2	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1945945_2	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1945945_4	PF20020	N/A	N/A	N/A	N/A
UniRef90	UHGV-1945945_5	UniRef90_A0A139JVB3	216.0	0	N/A	N/A
eggNOG-mapper	UHGV-1945945_5	742727.HMPREF9447_04873	160.0	0	N/A	N/A
Pfam	UHGV-1945945_5	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1945945_5	PF04448,NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-1945945_7	K00571	182.0	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1945945_7	phrog_67	187.3	0	DNA methyltransferase	other
UniRef90	UHGV-1945945_7	UniRef90_A0A2W3ZMK7	290.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1945945_7	755731.Clo1100_1145	286.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1945945_7	MTase_II_00037	183.4	0	Type II methyltransferase	RM
Pfam	UHGV-1945945_7	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1945945_7	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1945945_7	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1945945_8	UniRef90_A0A015Z7E5	83.6	7.78e-19	N/A	N/A
eggNOG-mapper	UHGV-1945945_8	411901.BACCAC_01195	56.6	0.0000000082	N/A	N/A
structural_annotation	UHGV-1945945_10	PF16546	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1945945_11	411901.BACCAC_01173	180.0	0	N/A	N/A
PHROG	UHGV-1945945_13	phrog_13561	55.0	9.9e-16	N/A	unknown function
structural_annotation	UHGV-1945945_13	PF21441,COG5045	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_14	phrog_12005	68.7	7.4e-20	N/A	unknown function
PHROG	UHGV-1945945_17	phrog_22725	61.6	6.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1945945_17	476272.RUMHYD_03319	52.8	0.0000000547	N/A	N/A
eggNOG-mapper	UHGV-1945945_19	657309.BXY_08540	75.5	6.44e-17	N/A	N/A
PHROG	UHGV-1945945_20	phrog_59	101.1	9.6e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1945945_20	UniRef90_A0A357JCP2	132.0	2.54e-33	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1945945_20	1423814.HMPREF0549_1779	109.0	3.07e-26	NUMOD4 motif	N/A
PADLOC	UHGV-1945945_20	HEase_00016	81.6	9.1e-29	homing endonuclease	RM
Pfam	UHGV-1945945_20	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-1945945_20	PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_21	phrog_874	107.9	7.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-1945945_21	1121098.HMPREF1534_01095	173.0	0	N/A	N/A
structural_annotation	UHGV-1945945_21	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_22	phrog_8684	90.8	9.7e-29	N/A	unknown function
UniRef90	UHGV-1945945_22	UniRef90_UPI001C016A5B	269.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1945945_22	762968.HMPREF9441_00543	142.0	2.29995e-41	YopX protein	N/A
Pfam	UHGV-1945945_22	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1945945_22	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1945945_22	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1945945_23	PF08928	N/A	N/A	N/A	N/A
UniRef90	UHGV-1945945_25	UniRef90_A0A415IS58	89.7	2.08e-20	LacI family DNA-binding transcriptional regulator	N/A
structural_annotation	UHGV-1945945_25	PF13384,TIGR04381	N/A	N/A	N/A	N/A
UniRef90	UHGV-1945945_26	UniRef90_F3QSP6	214.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1945945_26	762982.HMPREF9442_01206	214.0	0	N/A	N/A
PHROG	UHGV-1945945_27	phrog_38431	247.1	0	N/A	unknown function
UniRef90	UHGV-1945945_27	UniRef90_R5U340	226.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1945945_27	762982.HMPREF9442_01205	222.0	0	N/A	N/A
PHROG	UHGV-1945945_28	phrog_34053	121.2	6.6e-37	N/A	unknown function
PHROG	UHGV-1945945_29	phrog_28898	300.8	0	N/A	unknown function
UniRef90	UHGV-1945945_29	UniRef90_R5UN07	175.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1945945_29	762968.HMPREF9441_00553	263.0	0	N/A	N/A
structural_annotation	UHGV-1945945_29	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_30	phrog_31654	275.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1945945_30	762968.HMPREF9441_00554	244.0	0	N/A	N/A
PHROG	UHGV-1945945_31	phrog_16490	372.6	0	N/A	unknown function
UniRef90	UHGV-1945945_31	UniRef90_A0A7M1RSH1	293.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-1945945_31	762968.HMPREF9441_00555	475.0	0	N/A	N/A
UniRef90	UHGV-1945945_32	UniRef90_A0A8D9UI10	124.0	3.01e-35	Chromosomal replication initiator protein	N/A
eggNOG-mapper	UHGV-1945945_32	762982.HMPREF9442_01200	109.0	4.39e-30	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-1945945_32	PF08299,NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_35	phrog_20787	43.8	0.0000000000012	virion structural protein	head and packaging
UniRef90	UHGV-1945945_35	UniRef90_UPI0013228461	108.0	1.72e-20	glycoside hydrolase family 55 protein	N/A
eggNOG-mapper	UHGV-1945945_35	449673.BACSTE_02041	132.0	6.72e-29	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-1945945_35	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-1945945_37	PF14607,MF_01372,NF038393	N/A	N/A	N/A	N/A
KOfam	UHGV-1945945_38	K01448	117.1	1.8e-34	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1945945_38	phrog_435	168.7	0	endolysin	lysis
UniRef90	UHGV-1945945_38	UniRef90_A0A414Q7Y1	397.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1945945_38	657309.BXY_08040	323.0	0	COG NOG32858 non supervised orthologous group	N/A
Pfam	UHGV-1945945_38	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1945945_38	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1945945_38	PF01520,TIGR02883,COG0860	N/A	N/A	N/A	N/A
UniRef90	UHGV-1945945_40	UniRef90_UPI000E53ECB8	259.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1945945_40	1121100.JCM6294_559	152.0	2.8026e-45	N/A	N/A
Pfam	UHGV-1945945_40	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-1945945_40	PF05105,NF035928,COG4824	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1945945_41	272559.BF9343_2359	117.0	8.89e-32	N/A	N/A
eggNOG-mapper	UHGV-1945945_44	742727.HMPREF9447_04856	86.3	6.53e-21	N/A	N/A
PHROG	UHGV-1945945_45	phrog_38044	302.5	0	N/A	unknown function
UniRef90	UHGV-1945945_45	UniRef90_E2N857	372.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1945945_45	1236514.BAKL01000085_gene4861	269.0	0	N/A	N/A
PHROG	UHGV-1945945_46	phrog_26568	205.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1945945_46	1122971.BAME01000119_gene6178	237.0	0	N/A	N/A
structural_annotation	UHGV-1945945_46	PF02927,PF19266	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_47	phrog_22157	590.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1945945_47	411476.BACOVA_03941	440.0	0	N/A	N/A
structural_annotation	UHGV-1945945_47	PF05629,PF17642,PF06605,TIGR01646,COG3157	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_48	phrog_26233	49.5	0.00000000000005	N/A	unknown function
eggNOG-mapper	UHGV-1945945_48	411476.BACOVA_03937	66.6	0.0000000000505	N/A	N/A
PHROG	UHGV-1945945_49	phrog_26705	1137.3	0	N/A	unknown function
UniRef90	UHGV-1945945_49	UniRef90_A0A414Q7X1	2163.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1945945_49	657309.BXY_08300	1064.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1945945_49	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1945945_49	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1945945_49	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1945945_49	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_50	phrog_19292	54.2	0.000000000000003	N/A	unknown function
structural_annotation	UHGV-1945945_50	PF11524,MF_00338,TIGR03884,COG0393	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_51	phrog_37898	52.8	0.0000000000000077	N/A	unknown function
UniRef90	UHGV-1945945_51	UniRef90_UPI001556B5CC	129.0	8.44e-38	N/A	N/A
eggNOG-mapper	UHGV-1945945_51	449673.BACSTE_00567	168.0	0	N/A	N/A
Pfam	UHGV-1945945_51	PF10387	N/A	N/A	N/A	DUF2442
structural_annotation	UHGV-1945945_51	PF10387,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_52	phrog_14333	57.9	2e-16	N/A	unknown function
UniRef90	UHGV-1945945_52	UniRef90_A0A6I0K303	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-1945945_52	449673.BACSTE_00568	174.0	0	N/A	N/A
Pfam	UHGV-1945945_52	PF13711	N/A	N/A	N/A	DUF4160
structural_annotation	UHGV-1945945_52	PF13711	N/A	N/A	N/A	N/A
UniRef90	UHGV-1945945_53	UniRef90_E5V9B2	135.0	6.28e-40	Toxin-antitoxin system protein	N/A
eggNOG-mapper	UHGV-1945945_53	449673.BACSTE_00569	155.0	0	N/A	N/A
structural_annotation	UHGV-1945945_53	PF07878,NF041793,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_54	phrog_10324	52.6	0.0000000000000086	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1945945_54	UniRef90_UPI001EE8E1B7	95.5	2.58e-24	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1945945_54	449673.BACSTE_00571	130.0	5.64e-37	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1945945_54	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
COG	UHGV-1945945_54	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
KOfam	UHGV-1945945_55	K07741	66.2	1.1e-18	antB; anti-repressor protein	N/A
PHROG	UHGV-1945945_55	phrog_130	162.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1945945_55	UniRef90_A0A414Q7X6	508.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-1945945_55	449673.BACSTE_00571	231.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1945945_55	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1945945_55	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1945945_55	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
PHROG	UHGV-1945945_57	phrog_26299	45.2	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1945945_57	411476.BACOVA_03935	51.6	0.0000000392	N/A	N/A
PHROG	UHGV-1945945_58	phrog_6195	63.6	2.6e-18	tail protein	tail
UniRef90	UHGV-1945945_58	UniRef90_A0A374UT65	320.0	0	ABC transporter	N/A
eggNOG-mapper	UHGV-1945945_58	449673.BACSTE_00574	353.0	0	N/A	N/A
PHROG	UHGV-1945945_59	phrog_25857	44.2	0.0000000000019	N/A	unknown function
PHROG	UHGV-1945945_60	phrog_24272	220.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1945945_60	449673.BACSTE_00576	545.0	0	N/A	N/A
structural_annotation	UHGV-1945945_60	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_61	phrog_23418	106.7	1.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-1945945_61	449673.BACSTE_00577	347.0	0	N/A	N/A
eggNOG-mapper	UHGV-1945945_62	449673.BACSTE_00578	335.0	0	N/A	N/A
structural_annotation	UHGV-1945945_62	PF20459	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_64	phrog_10	146.1	2.49431e-43	major head protein	head and packaging
UniRef90	UHGV-1945945_64	UniRef90_UPI001106E187	721.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1945945_64	449673.BACSTE_00580	847.0	0	Phage capsid family	N/A
Pfam	UHGV-1945945_64	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1945945_64	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1945945_64	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1945945_64	PF05065,MF_04113,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1945945_65	K06904	150.3	1.54143e-44	N/A	N/A
PHROG	UHGV-1945945_65	phrog_80	138.9	4.69996e-41	head maturation protease	head and packaging
UniRef90	UHGV-1945945_65	UniRef90_B0NM79	502.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1945945_65	449673.BACSTE_00581	502.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1945945_65	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1945945_65	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1945945_65	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1945945_65	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_66	phrog_12	91.1	7.9e-27	portal protein	head and packaging
UniRef90	UHGV-1945945_66	UniRef90_UPI001485B311	689.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1945945_66	449673.BACSTE_00582	872.0	0	Phage portal protein	N/A
Pfam	UHGV-1945945_66	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1945945_66	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1945945_67	phrog_38	310.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1945945_67	UniRef90_UPI0011064D5D	991.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1945945_67	449673.BACSTE_00583	1244.0	0	domain protein	N/A
NCBIFam	UHGV-1945945_67	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1945945_67	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1945945_67	PF17289,PF05876,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-1945945_68	K07474	103.6	3.8e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1945945_68	phrog_51	100.3	1.7e-29	terminase small subunit	head and packaging
UniRef90	UHGV-1945945_68	UniRef90_B0NM82	334.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1945945_68	449673.BACSTE_00584	334.0	0	Terminase small subunit	N/A
Pfam	UHGV-1945945_68	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1945945_68	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1945945_68	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1945945_69	K04763	76.5	3.6e-22	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1945945_69	phrog_1	113.5	2.4e-33	integrase	integration and excision
UniRef90	UHGV-1945945_69	UniRef90_B0NM83	784.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1945945_69	449673.BACSTE_00585	784.0	0	Phage integrase SAM-like domain	N/A
Pfam	UHGV-1945945_69	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-1945945_69	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-1945945_69	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1945945_69	PF17293,PF13102,PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A