UHGV-2016576 (vOTU-077689)

Viral Genome: UHGV-2016576

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-2016576
vOTU ID	vOTU-077689
Representative Genome?	Yes
Source	IMGVR4
Original Genome ID	3300029113\|Ga0168853_100534
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9823
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	30.31
Jumbo Phage?	No

Genome Content
Length (bps)	42,957
GC Content	52.56%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	80
CDS Density	93%
Average CDS Length (bps)	501.08
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2016576_4	UniRef90_A0A1C6DFA0	195.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-2016576_4	935948.KE386495_gene2250	101.0	9.97e-25	N/A	N/A
Pfam	UHGV-2016576_4	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-2016576_4	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_5	phrog_1770	55.9	8.4e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2016576_5	UniRef90_A0A832L5E4	155.0	1.4013e-45	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-2016576_5	536233.CLO_1822	151.0	1.68156e-44	N/A	N/A
structural_annotation	UHGV-2016576_5	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_7	phrog_801	63.8	3.5e-18	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-2016576_7	UniRef90_A0A316M891	101.0	1.56e-25	N/A	N/A
eggNOG-mapper	UHGV-2016576_7	1366055.S5MLS6_9CAUD	61.6	0.000000000427	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-2016576_7	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-2016576_7	PF18909	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2016576_8	742738.HMPREF9460_02503	95.5	2.8e-24	N/A	N/A
structural_annotation	UHGV-2016576_8	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-2016576_9	UniRef90_UPI0018AC41F1	154.0	1.4013e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2016576_9	1226322.HMPREF1545_00042	127.0	3.96e-36	N/A	N/A
structural_annotation	UHGV-2016576_9	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-2016576_10	K06909	380.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2016576_10	phrog_5653	159.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-2016576_10	UniRef90_A0A2U1BEH4	716.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2016576_10	33035.JPJF01000106_gene3136	461.0	0	Terminase small subunit	N/A
Pfam	UHGV-2016576_10	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2016576_10	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2016576_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2016576_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2016576_10	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_11	phrog_533	362.1	0	portal protein	head and packaging
UniRef90	UHGV-2016576_11	UniRef90_UPI0006C81717	694.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-2016576_11	1226322.HMPREF1545_00044	613.0	0	N/A	N/A
Pfam	UHGV-2016576_11	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2016576_11	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_12	phrog_581	297.8	0	minor head protein	head and packaging
UniRef90	UHGV-2016576_12	UniRef90_UPI001D080D49	480.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2016576_12	1226322.HMPREF1545_00046	371.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2016576_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2016576_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2016576_12	PF06152	N/A	N/A	N/A	N/A
Pfam	UHGV-2016576_13	PF01129	N/A	N/A	NAD:arginine ADP-ribosyltransferase	ART
UniRef90	UHGV-2016576_15	UniRef90_A0A2Z4Q9Y8	73.9	0.000000000000342	Minor structural protein	N/A
eggNOG-mapper	UHGV-2016576_15	1232443.BAIA02000078_gene31	91.3	6.71e-21	N/A	N/A
structural_annotation	UHGV-2016576_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_16	phrog_10	170.9	0	major head protein	head and packaging
UniRef90	UHGV-2016576_16	UniRef90_A0A2U1BEF2	499.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-2016576_16	1226322.HMPREF1545_00050	474.0	0	Phage capsid family	N/A
Pfam	UHGV-2016576_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2016576_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2016576_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2016576_16	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_17	phrog_541	100.5	1.1e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-2016576_17	642492.Clole_0822	62.0	0.000000000245	N/A	N/A
PHROG	UHGV-2016576_18	phrog_3366	104.5	8.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-2016576_18	1226322.HMPREF1545_00053	166.0	0	N/A	N/A
Pfam	UHGV-2016576_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2016576_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_19	phrog_556	72.0	6.9e-21	minor head protein	head and packaging
UniRef90	UHGV-2016576_19	UniRef90_UPI00195E1497	208.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2016576_19	1226322.HMPREF1545_00054	163.0	0	Minor capsid protein	N/A
Pfam	UHGV-2016576_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2016576_19	PF11114,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2016576_20	1232443.BAIA02000078_gene24	157.0	0	N/A	N/A
structural_annotation	UHGV-2016576_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_21	phrog_3099	73.2	3.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-2016576_21	1235797.C816_04186	204.0	0	N/A	N/A
structural_annotation	UHGV-2016576_21	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_22	phrog_11299	65.1	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-2016576_22	693746.OBV_18160	159.0	0	N/A	N/A
structural_annotation	UHGV-2016576_22	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_23	phrog_706	127.5	9.2e-38	N/A	unknown function
UniRef90	UHGV-2016576_23	UniRef90_UPI000682A80B	226.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2016576_23	693746.OBV_18170	209.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2016576_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2016576_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_24	phrog_1535	121.8	0	tail length tape measure protein	tail
UniRef90	UHGV-2016576_24	UniRef90_A0A810PX76	246.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2016576_24	1235797.C816_04182	416.0	0	SLT domain	N/A
COG	UHGV-2016576_24	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_25	phrog_1194	77.6	1.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-2016576_25	411902.CLOBOL_00125	116.0	1.11e-31	N/A	N/A
structural_annotation	UHGV-2016576_25	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_26	phrog_13879	245.5	0	N/A	unknown function
eggNOG-mapper	UHGV-2016576_26	1226322.HMPREF1545_00061	360.0	0	N/A	N/A
structural_annotation	UHGV-2016576_26	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_27	phrog_18725	58.7	5.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-2016576_27	1226322.HMPREF1545_00062	84.7	1.64e-18	N/A	N/A
structural_annotation	UHGV-2016576_28	PF09826,MF_03001,TIGR04528,COG2706	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2016576_29	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_30	phrog_31538	49.1	0.00000000000011	N/A	unknown function
eggNOG-mapper	UHGV-2016576_30	428125.CLOLEP_01433	65.1	0.000000000000968	N/A	N/A
PHROG	UHGV-2016576_31	phrog_13589	157.2	0	N/A	unknown function
eggNOG-mapper	UHGV-2016576_31	428125.CLOLEP_01434	201.0	0	N/A	N/A
UniRef90	UHGV-2016576_32	UniRef90_UPI001C012877	195.0	0	leucine-rich repeat protein	N/A
eggNOG-mapper	UHGV-2016576_32	471875.RUMLAC_02240	126.0	5.81e-29	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-2016576_32	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-2016576_32	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2016576_32	PF13306,NF041351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2016576_34	411471.SUBVAR_06976	52.4	0.00000122	N/A	N/A
structural_annotation	UHGV-2016576_34	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_35	phrog_937	48.5	0.00000000000017	hemolysin	other
eggNOG-mapper	UHGV-2016576_35	1519439.JPJG01000023_gene533	66.6	0.000000000000485	N/A	N/A
PHROG	UHGV-2016576_37	phrog_13256	62.0	5.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-2016576_37	428125.CLOLEP_01907	73.9	1.56e-16	N/A	N/A
UniRef90	UHGV-2016576_38	UniRef90_H1CEM5	216.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-2016576_38	525254.HMPREF0072_1273	205.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-2016576_38	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2016576_38	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2016576_39	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2016576_42	478749.BRYFOR_07651	77.0	0.00000000000000923	N/A	N/A
structural_annotation	UHGV-2016576_42	TIGR03826	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2016576_43	1384065.JAGS01000001_gene2489	49.7	0.00000426	N/A	N/A
PHROG	UHGV-2016576_44	phrog_3754	101.4	8e-30	N/A	unknown function
eggNOG-mapper	UHGV-2016576_44	476272.RUMHYD_01764	164.0	0	N/A	N/A
PHROG	UHGV-2016576_45	phrog_21718	103.9	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-2016576_45	476272.RUMHYD_01768	57.8	0.0000000203	N/A	N/A
PHROG	UHGV-2016576_46	phrog_22984	74.9	1.3e-22	N/A	unknown function
PHROG	UHGV-2016576_47	phrog_16490	149.4	2.24208e-44	N/A	unknown function
eggNOG-mapper	UHGV-2016576_47	1408437.JNJN01000043_gene803	120.0	2.26e-30	N/A	N/A
PHROG	UHGV-2016576_49	phrog_20016	179.3	0	N/A	unknown function
UniRef90	UHGV-2016576_49	UniRef90_A0A285PT46	184.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2016576_49	1226322.HMPREF1545_00077	157.0	0	N/A	N/A
structural_annotation	UHGV-2016576_49	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2016576_50	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2016576_51	1226322.HMPREF1545_00079	105.0	4.42e-28	N/A	N/A
KOfam	UHGV-2016576_52	K14059	163.5	0	int; integrase	N/A
PHROG	UHGV-2016576_52	phrog_1	164.1	0	integrase	integration and excision
UniRef90	UHGV-2016576_52	UniRef90_A0A2Z4QB94	241.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-2016576_52	1226322.HMPREF1545_00144	128.0	9.83e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2016576_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2016576_52	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2016576_52	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-2016576_53	K07729	40.2	0.000000000053	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-2016576_53	UniRef90_A0A3D3Y4M8	77.8	0.000000000000027	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-2016576_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2016576_53	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-2016576_55	UniRef90_A0A7W8CV52	77.0	0.000000000000307	ABC-type glycerol-3-phosphate transport system substrate-binding protein	N/A
eggNOG-mapper	UHGV-2016576_55	1298920.KI911353_gene413	138.0	4.38e-38	N/A	N/A
Pfam	UHGV-2016576_55	PF12773	N/A	N/A	Double zinc ribbon	DZR
eggNOG-mapper	UHGV-2016576_59	476272.RUMHYD_03309	54.7	0.0000000421	N/A	N/A
structural_annotation	UHGV-2016576_59	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-2016576_60	UniRef90_UPI001E54DE4F	93.2	2.02e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2016576_60	1226322.HMPREF1545_00148	82.0	1.31e-18	Transcriptional	N/A
Pfam	UHGV-2016576_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2016576_60	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2016576_60	PF01381,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-2016576_61	UniRef90_UPI0018995761	88.6	7.92e-22	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-2016576_61	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2016576_61	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2016576_62	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2016576_63	596152.DesU5LDRAFT_1910	93.6	5.47e-21	N/A	N/A
structural_annotation	UHGV-2016576_63	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_68	phrog_2872	214.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2016576_68	UniRef90_UPI00058FD242	298.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2016576_68	1345695.CLSA_c30180	293.0	0	AAA domain	N/A
structural_annotation	UHGV-2016576_68	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_69	phrog_18107	59.0	7e-17	N/A	unknown function
eggNOG-mapper	UHGV-2016576_69	903814.ELI_1274	137.0	1.88e-38	N/A	N/A
structural_annotation	UHGV-2016576_69	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_70	phrog_15768	65.2	9.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-2016576_70	1077285.AGDG01000032_gene4172	64.7	0.000000000783	N/A	N/A
Pfam	UHGV-2016576_70	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-2016576_70	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-2016576_71	K02315	114.4	1.2e-33	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-2016576_71	phrog_50	109.8	3e-32	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2016576_71	UniRef90_A0A4Z0Y679	220.0	0	DNA replication protein DnaC	N/A
eggNOG-mapper	UHGV-2016576_71	1507.HMPREF0262_00302	198.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-2016576_71	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-2016576_71	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-2016576_71	PF01695,MF_00377,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-2016576_75	phrog_9298	47.4	0.00000000000026	radical SAM domain protein	other
UniRef90	UHGV-2016576_75	UniRef90_A0A841L4D7	182.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-2016576_75	742817.HMPREF9449_01796	182.0	0	radical SAM domain protein	N/A
COG	UHGV-2016576_75	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A