UHGV-2040156 (vOTU-024894)

Viral Genome: UHGV-2040156

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-2040156
vOTU ID	vOTU-024894
Representative Genome?	Yes
Source	IMGVR4
Original Genome ID	3300029240\|Ga0168677_100881
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	77.42 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.979
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	43.56
Jumbo Phage?	No

Genome Content
Length (bps)	32,607
GC Content	52.93%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	57
CDS Density	92%
Average CDS Length (bps)	528.74
Total tRNA Genes	3
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 77.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2040156_1	phrog_888	57.3	4.1e-16	N/A	unknown function
UniRef90	UHGV-2040156_1	UniRef90_UPI000BFBCD85	56.6	0.00000000164	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-2040156_1	525318.HMPREF0497_2967	51.2	0.000000289	Short C-terminal domain	N/A
Pfam	UHGV-2040156_1	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
UniRef90	UHGV-2040156_4	UniRef90_A0A6N7TLT0	347.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2040156_4	266265.Bxe_A3948	55.5	0.0000000655	Helix-turn-helix domain	N/A
Pfam	UHGV-2040156_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2040156_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2040156_4	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_6	phrog_15303	114.6	4.4e-34	N/A	unknown function
Pfam	UHGV-2040156_6	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-2040156_8	K07273	150.6	1.26117e-44	acm; lysozyme	N/A
PHROG	UHGV-2040156_8	phrog_291	105.4	6e-31	endolysin	lysis
UniRef90	UHGV-2040156_8	UniRef90_A0A564U0D3	397.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2040156_8	718252.FP2_04890	242.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2040156_8	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2040156_8	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2040156_8	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-2040156_9	UniRef90_A0A286IRS5	142.0	2.03e-34	Lysophospholipase L1	N/A
eggNOG-mapper	UHGV-2040156_9	880070.Cycma_1221	146.0	1.94e-36	lipolytic protein G-D-S-L family	N/A
COG	UHGV-2040156_9	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
structural_annotation	UHGV-2040156_9	PF08244,PF04311,NF007819,COG2845,COG2273	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_10	phrog_3558	192.0	0	tail protein	tail
eggNOG-mapper	UHGV-2040156_10	1235799.C818_04233	92.0	4.55e-17	Prophage endopeptidase tail	N/A
Pfam	UHGV-2040156_10	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-2040156_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2040156_10	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-2040156_12	UniRef90_R6QN45	89.7	5.21e-18	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-2040156_12	411490.ANACAC_00709	82.0	6.5e-16	phage tail	N/A
COG	UHGV-2040156_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2040156_12	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_14	phrog_1686	86.3	2.8e-25	tail length tape measure protein	tail
UniRef90	UHGV-2040156_14	UniRef90_A0A844DDD5	802.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-2040156_14	1492737.FEM08_12070	145.0	1.35e-33	tape measure	N/A
Pfam	UHGV-2040156_14	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2040156_14	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2040156_14	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2040156_14	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_16	phrog_885	62.0	6.8e-18	major tail protein	tail
UniRef90	UHGV-2040156_16	UniRef90_A0A843J9F0	117.0	6.36e-29	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-2040156_16	457396.CSBG_01054	58.5	0.000000114	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-2040156_16	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-2040156_16	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2040156_17	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_18	phrog_17977	49.9	0.000000000000046	N/A	unknown function
UniRef90	UHGV-2040156_18	UniRef90_A0A844DHJ8	239.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-2040156_18	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_20	phrog_544	140.5	1.19993e-41	major head protein	head and packaging
UniRef90	UHGV-2040156_20	UniRef90_R0BKA1	432.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2040156_20	476272.RUMHYD_01776	320.0	0	N/A	N/A
structural_annotation	UHGV-2040156_20	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
Pfam	UHGV-2040156_21	PF14747	N/A	N/A	N/A	DUF4473
structural_annotation	UHGV-2040156_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_23	phrog_5	52.0	0.000000000000017	tail completion or Neck1 protein	connector
UniRef90	UHGV-2040156_23	UniRef90_A0A844DDB3	295.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2040156_23	1123309.AQYB01000018_gene814	92.8	3.98e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2040156_23	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2040156_23	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_25	phrog_8680	202.5	0	N/A	unknown function
UniRef90	UHGV-2040156_25	UniRef90_A0A844D688	454.0	0	N/A	N/A
eggNOG-mapper	UHGV-2040156_25	1423790.BN53_04265	184.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-2040156_25	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-2040156_25	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2040156_25	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_27	phrog_2468	80.5	1.4e-23	head morphogenesis	head and packaging
UniRef90	UHGV-2040156_27	UniRef90_A0A844DBI4	623.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-2040156_27	1504822.CCNO01000013_gene286	130.0	9.14e-31	cell adhesion	N/A
Pfam	UHGV-2040156_27	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-2040156_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2040156_27	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_29	phrog_64	110.0	4.4e-33	portal protein	head and packaging
UniRef90	UHGV-2040156_29	UniRef90_A0A6N7TNT3	843.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2040156_29	1042156.CXIVA_01850	82.0	0.00000000000008	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2040156_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2040156_29	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-2040156_30	K06909	139.8	2.4e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2040156_30	phrog_10250	171.9	0	N/A	unknown function
UniRef90	UHGV-2040156_30	UniRef90_A0A844D8I4	848.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2040156_30	411490.ANACAC_00783	493.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2040156_30	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-2040156_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2040156_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2040156_30	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_31	phrog_606	87.6	1.3e-25	terminase small subunit	head and packaging
UniRef90	UHGV-2040156_31	UniRef90_UPI001C02EFD1	328.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-2040156_31	397290.C810_05185	142.0	1.84999e-40	DNA-packaging protein gp3	N/A
Pfam	UHGV-2040156_31	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-2040156_31	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_32	phrog_36	51.4	0.000000000000019	transcriptional regulator	transcription regulation
structural_annotation	UHGV-2040156_32	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-2040156_34	K01160	58.9	1.5e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2040156_34	phrog_34	60.7	2.8e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040156_34	UniRef90_UPI0012DF3C2B	216.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2040156_34	875454.BAEW01000002_gene491	126.0	8.63e-36	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2040156_34	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2040156_34	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2040156_34	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_36	phrog_757	184.1	0	DNA methyltransferase	other
UniRef90	UHGV-2040156_36	UniRef90_A0A355KVL2	357.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-2040156_36	748224.HMPREF9436_03069	401.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-2040156_36	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2040156_36	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_39	phrog_5968	77.0	2.1e-22	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040156_39	UniRef90_UPI001C02E649	355.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-2040156_39	718252.FP2_01000	168.0	0	N/A	N/A
NCBIFam	UHGV-2040156_39	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-2040156_39	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-2040156_39	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-2040156_40	K03111	135.7	5.1e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2040156_40	phrog_44	141.1	6.09985e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040156_40	UniRef90_A0A844DI52	270.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2040156_40	718252.FP2_06770	214.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-2040156_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2040156_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2040156_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2040156_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2040156_40	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_41	phrog_561	108.8	5.7e-32	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040156_41	UniRef90_A0A1G8PW75	142.0	7.56e-38	RecT family protein	N/A
eggNOG-mapper	UHGV-2040156_41	563192.HMPREF0179_00147	153.0	2.24068e-42	N/A	N/A
structural_annotation	UHGV-2040156_41	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2040156_43	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2040156_45	PF07870,COG3461	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2040156_47	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_48	phrog_373	192.5	0	anti-repressor	transcription regulation
UniRef90	UHGV-2040156_48	UniRef90_UPI001C039A6C	402.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-2040156_48	1414720.CBYM010000002_gene582	154.0	8.26766e-44	ORF6C domain	N/A
Pfam	UHGV-2040156_48	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-2040156_48	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-2040156_48	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2040156_48	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-2040156_48	PF10552,PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-2040156_51	UniRef90_A0A1C7FQD9	65.5	0.00000000000118	Transcriptional regulator	N/A
Pfam	UHGV-2040156_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2040156_51	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2040156_53	UniRef90_A0A7X1LWA7	94.0	1.01e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2040156_53	428125.CLOLEP_02737	65.9	0.000000000000215	N/A	N/A
PHROG	UHGV-2040156_54	phrog_8	48.1	0.00000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-2040156_54	UniRef90_A0A373XY93	89.4	1.45e-20	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2040156_54	1304866.K413DRAFT_0834	57.4	0.00000000446	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-2040156_54	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-2040156_54	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2040156_54	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2040156_57	phrog_888	67.0	3.7e-19	N/A	unknown function
UniRef90	UHGV-2040156_57	UniRef90_A0A6N7TMA2	318.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-2040156_57	1415774.U728_165	57.0	0.000000303	Short C-terminal domain	N/A
Pfam	UHGV-2040156_57	PF14471	N/A	N/A	N/A	DUF4428
structural_annotation	UHGV-2040156_57	PF14471	N/A	N/A	N/A	N/A