UHGV-2064200 (vOTU-112156)

Viral Genome: UHGV-2064200

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-2064200
vOTU ID	vOTU-112156
Representative Genome?	Yes
Source	IMGVR4
Original Genome ID	3300029389\|Ga0243995_1001096
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	62.78 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	3
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9764
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	8.75
Jumbo Phage?	No

Genome Content
Length (bps)	22,112
GC Content	41.84%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	35
CDS Density	88%
Average CDS Length (bps)	559.03
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2064200_1	UniRef90_A0A7X8R143	48.9	0.000000534	Mn-containing catalase (Fragment)	N/A
eggNOG-mapper	UHGV-2064200_1	397288.C806_02557	63.5	0.00000000000361	Manganese containing catalase	N/A
COG	UHGV-2064200_1	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
PHROG	UHGV-2064200_2	phrog_2742	78.7	7.9e-23	endolysin	lysis
UniRef90	UHGV-2064200_2	UniRef90_A0A173ZHV9	744.0	0	Clostridial hydrophobic W	N/A
eggNOG-mapper	UHGV-2064200_2	411462.DORLON_00764	243.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-2064200_2	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-2064200_2	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-2064200_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-2064200_2	PF01520,TIGR02883,COG5492,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-2064200_3	phrog_1129	87.7	6.8e-26	holin	lysis
UniRef90	UHGV-2064200_3	UniRef90_A0A893W7Y5	165.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-2064200_3	411460.RUMTOR_01325	131.0	9.15e-39	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-2064200_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2064200_3	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-2064200_4	phrog_4105	85.8	4e-25	N/A	unknown function
eggNOG-mapper	UHGV-2064200_4	411459.RUMOBE_00911	147.0	2.8026e-45	N/A	N/A
PHROG	UHGV-2064200_6	phrog_28526	115.1	2e-34	N/A	unknown function
UniRef90	UHGV-2064200_6	UniRef90_UPI00156FE2AD	95.1	6.69e-25	N/A	N/A
eggNOG-mapper	UHGV-2064200_6	411462.DORLON_00769	83.2	6.22e-21	N/A	N/A
Pfam	UHGV-2064200_6	PF04255	N/A	N/A	N/A	DUF433
KOfam	UHGV-2064200_8	K00986	93.2	3.1e-27	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-2064200_8	phrog_1423	154.0	1.4013e-45	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2064200_8	UniRef90_UPI00156F87C5	715.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-2064200_8	33035.JPJF01000043_gene1000	258.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-2064200_8	icity0040	57.8	2.5e-18	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-2064200_8	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-2064200_8	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-2064200_8	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-2064200_9	phrog_17147	268.2	0	N/A	unknown function
UniRef90	UHGV-2064200_9	UniRef90_A0A374JQW7	560.0	0	N/A	N/A
eggNOG-mapper	UHGV-2064200_9	657322.FPR_27150	151.0	1.9e-36	N/A	N/A
structural_annotation	UHGV-2064200_11	PF16323	N/A	N/A	N/A	N/A
UniRef90	UHGV-2064200_12	UniRef90_UPI00156D7781	114.0	2.44e-25	SGNH/GDSL hydrolase family protein	N/A
eggNOG-mapper	UHGV-2064200_12	411462.DORLON_00771	116.0	9.32e-26	N/A	N/A
structural_annotation	UHGV-2064200_12	PF10651,COG3470	N/A	N/A	N/A	N/A
COG	UHGV-2064200_13	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-2064200_14	phrog_14030	155.4	0	N/A	unknown function
UniRef90	UHGV-2064200_14	UniRef90_UPI0018999D57	635.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-2064200_14	33035.JPJF01000093_gene2240	350.0	0	NlpC/P60 family	N/A
Pfam	UHGV-2064200_14	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-2064200_14	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-2064200_14	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2064200_14	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2064200_18	1235799.C818_04211	73.6	0.0000000000000306	N/A	N/A
structural_annotation	UHGV-2064200_19	PF17516,NF037951	N/A	N/A	N/A	N/A
UniRef90	UHGV-2064200_20	UniRef90_UPI000E4AEE34	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-2064200_20	411460.RUMTOR_01556	211.0	0	N/A	N/A
Pfam	UHGV-2064200_20	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-2064200_20	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
KOfam	UHGV-2064200_22	K03497	139.3	4.30002e-41	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-2064200_22	phrog_6218	198.4	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2064200_22	UniRef90_A0A174HNH0	800.0	0	Probable chromosome-partitioning protein parB	N/A
eggNOG-mapper	UHGV-2064200_22	411461.DORFOR_01144	314.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-2064200_22	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-2064200_22	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-2064200_22	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2064200_22	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-2064200_23	K03469	57.1	4e-16	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-2064200_23	phrog_531	56.0	7.2e-16	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2064200_23	UniRef90_A0A174HML3	203.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-2064200_23	1235792.C808_03083	79.7	1.32e-17	RNase H	N/A
Pfam	UHGV-2064200_23	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-2064200_23	COG0328	N/A	N/A	Ribonuclease HI	N/A
PHROG	UHGV-2064200_24	phrog_3584	148.4	3.92364e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2064200_24	33035.JPJF01000138_gene3005	359.0	0	N/A	N/A
structural_annotation	UHGV-2064200_24	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-2064200_25	phrog_3777	82.0	4.5e-24	N/A	unknown function
UniRef90	UHGV-2064200_25	UniRef90_A0A3E4GMR6	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-2064200_25	411460.RUMTOR_02064	120.0	1.04e-33	N/A	N/A
Pfam	UHGV-2064200_25	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-2064200_25	PF12957	N/A	N/A	N/A	N/A
KOfam	UHGV-2064200_29	K07741	80.8	4.3e-23	antB; anti-repressor protein	N/A
PHROG	UHGV-2064200_29	phrog_9438	149.0	8.40779e-45	anti-repressor	transcription regulation
UniRef90	UHGV-2064200_29	UniRef90_UPI00156DA2D3	249.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-2064200_29	658655.HMPREF0988_02592	191.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-2064200_29	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-2064200_29	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-2064200_29	PF03374,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-2064200_32	K22300	64.7	2e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2064200_32	phrog_8	53.8	0.000000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-2064200_32	UniRef90_UPI0018978DE3	195.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2064200_32	1235792.C808_00054	154.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2064200_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2064200_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2064200_32	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2064200_34	phrog_38135	64.9	1.2e-18	N/A	unknown function
UniRef90	UHGV-2064200_34	UniRef90_UPI001F3985DB	226.0	0	N/A	N/A
eggNOG-mapper	UHGV-2064200_34	661087.HMPREF1008_01261	81.3	0.0000000000000492	sequence-specific DNA binding	N/A
Pfam	UHGV-2064200_34	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-2064200_34	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-2064200_34	PF14020	N/A	N/A	N/A	N/A
KOfam	UHGV-2064200_35	K06400	230.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2064200_35	phrog_95	277.8	0	integrase	integration and excision
UniRef90	UHGV-2064200_35	UniRef90_A0A1C5N2V2	998.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-2064200_35	665950.HMPREF1025_02566	614.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-2064200_35	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2064200_35	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-2064200_35	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-2064200_35	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2064200_35	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A