UHGV-2131618 (vOTU-001294)

Viral Genome: UHGV-2131618

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-2131618
vOTU ID	vOTU-001294
Representative Genome?	Yes
Source	IMGVR4
Original Genome ID	3300029717\|Ga0245160_1000760
Associated Biosample	SAMEA3449212
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9726
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	3.49
Jumbo Phage?	No

Genome Content
Length (bps)	38,869
GC Content	51.08%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	60
CDS Density	93%
Average CDS Length (bps)	602.50
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2131618_1	phrog_4105	48.1	0.0000000000002	N/A	unknown function
eggNOG-mapper	UHGV-2131618_1	1291050.JAGE01000001_gene433	53.1	0.0000000194	N/A	N/A
PHROG	UHGV-2131618_2	phrog_1129	83.2	1.7e-24	holin	lysis
UniRef90	UHGV-2131618_2	UniRef90_UPI001D085C49	112.0	1.59e-30	phage holin family protein	N/A
eggNOG-mapper	UHGV-2131618_2	1232453.BAIF02000030_gene2527	117.0	2.79e-33	N/A	N/A
Pfam	UHGV-2131618_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2131618_2	PF16079	N/A	N/A	N/A	N/A
KOfam	UHGV-2131618_3	K01447	106.4	3.6e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2131618_3	phrog_9611	121.1	9.4e-36	endolysin	lysis
UniRef90	UHGV-2131618_3	UniRef90_UPI000680A6E4	202.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-2131618_3	1519439.JPJG01000038_gene1459	197.0	0	Ami_2	N/A
Pfam	UHGV-2131618_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-2131618_3	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-2131618_3	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-2131618_3	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2131618_5	1408437.JNJN01000060_gene452	503.0	0	heme binding	N/A
Pfam	UHGV-2131618_5	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
COG	UHGV-2131618_5	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-2131618_8	phrog_1281	127.0	9.8e-38	N/A	unknown function
UniRef90	UHGV-2131618_8	UniRef90_I5D670	169.0	0	N/A	N/A
eggNOG-mapper	UHGV-2131618_8	2110.MAGa7400	164.0	0	N/A	N/A
Pfam	UHGV-2131618_8	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-2131618_8	COG3600	N/A	N/A	N/A	N/A
KOfam	UHGV-2131618_10	K14059	223.2	0	int; integrase	N/A
PHROG	UHGV-2131618_10	phrog_1	207.0	0	integrase	integration and excision
UniRef90	UHGV-2131618_10	UniRef90_A0A1H8A220	287.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-2131618_10	1507.HMPREF0262_00307	194.0	0	Phage integrase family	N/A
Pfam	UHGV-2131618_10	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-2131618_10	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2131618_10	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2131618_10	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_11	phrog_14333	106.9	1e-31	N/A	unknown function
UniRef90	UHGV-2131618_11	UniRef90_UPI001CF8B1A8	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-2131618_11	665956.HMPREF1032_03224	185.0	0	N/A	N/A
Pfam	UHGV-2131618_11	PF13711	N/A	N/A	N/A	DUF4160
structural_annotation	UHGV-2131618_11	PF13711	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_12	phrog_37898	108.8	2.5e-32	N/A	unknown function
UniRef90	UHGV-2131618_12	UniRef90_UPI001CF7FE30	148.0	9.80909e-45	N/A	N/A
eggNOG-mapper	UHGV-2131618_12	665956.HMPREF1032_03225	191.0	0	N/A	N/A
Pfam	UHGV-2131618_12	PF10387	N/A	N/A	N/A	DUF2442
COG	UHGV-2131618_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2131618_12	PF10387	N/A	N/A	N/A	N/A
KOfam	UHGV-2131618_13	K15773	57.5	2.8e-16	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-2131618_13	phrog_1373	49.2	0.000000000000099	transcriptional regulator	transcription regulation
UniRef90	UHGV-2131618_13	UniRef90_UPI001967D0EA	109.0	1.08e-29	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2131618_13	138119.DSY3664	68.2	0.0000000000000464	sequence-specific DNA binding	N/A
Pfam	UHGV-2131618_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2131618_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2131618_13	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2131618_15	1195236.CTER_5134	70.9	0.000000000000279	N/A	N/A
UniRef90	UHGV-2131618_16	UniRef90_R5M693	60.8	0.000000152	Ig-like domain-containing surface protein	N/A
eggNOG-mapper	UHGV-2131618_16	756499.Desde_3141	83.2	5.52e-16	Bacterial Ig-like domain 2	N/A
NCBIFam	UHGV-2131618_16	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-2131618_16	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_17	phrog_8	43.4	0.0000000000076	transcriptional regulator	transcription regulation
UniRef90	UHGV-2131618_17	UniRef90_A0A3A9GLA4	115.0	2.98e-32	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2131618_17	97138.C820_00805	111.0	2.56e-30	Cro/C1-type HTH DNA-binding domain	N/A
structural_annotation	UHGV-2131618_17	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2131618_19	K23779	67.8	2.4e-19	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-2131618_19	phrog_5823	53.8	0.000000000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-2131618_19	UniRef90_A0A4S2A9B1	92.0	4.69e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2131618_19	981383.AEWH01000008_gene3665	55.5	0.00000000619	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-2131618_19	retron_type_VI_hth_cluster2_1	48.1	0.00000000000031	N/A	Retron
Pfam	UHGV-2131618_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2131618_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2131618_19	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2131618_20	UniRef90_UPI001C1008FC	73.9	0.00000000000000229	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-2131618_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2131618_21	PF12728,NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_29	phrog_14970	190.9	0	N/A	unknown function
UniRef90	UHGV-2131618_29	UniRef90_UPI00164BFA28	154.0	5.60519e-45	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-2131618_29	397291.C804_03856	145.0	7.97003e-41	double-strand break repair protein	N/A
Pfam	UHGV-2131618_29	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-2131618_29	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-2131618_29	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_30	phrog_7566	97.7	6.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-2131618_30	1280698.AUJS01000007_gene1020	68.2	0.00000000000018	N/A	N/A
PHROG	UHGV-2131618_31	phrog_1389	74.0	1.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-2131618_31	1347392.CCEZ01000060_gene3269	102.0	5.78e-27	N/A	N/A
structural_annotation	UHGV-2131618_31	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
KOfam	UHGV-2131618_32	K03111	140.2	2.20004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2131618_32	phrog_44	143.3	1.3999e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2131618_32	UniRef90_A0A1H7ZUU3	156.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2131618_32	445972.ANACOL_01827	139.0	1.67e-40	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2131618_32	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2131618_32	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2131618_32	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2131618_32	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2131618_32	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_33	phrog_10469	120.2	1.3e-35	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2131618_33	UniRef90_A0A4P8I8N3	219.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-2131618_33	742740.HMPREF9474_03492	155.0	1.16308e-43	DnaD domain protein	N/A
COG	UHGV-2131618_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-2131618_33	PF04492,MF_01584,TIGR01610,TIGR02220,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-2131618_34	K01160	63.0	8.1e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2131618_34	phrog_34	59.8	5.4e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2131618_34	UniRef90_A0A4Z0XVC7	137.0	1.74e-39	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-2131618_34	525919.Apre_0813	108.0	1.38e-28	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2131618_34	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2131618_34	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2131618_34	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
Pfam	UHGV-2131618_35	PF09889	N/A	N/A	N/A	DUF2116
KOfam	UHGV-2131618_36	K00390	82.4	2.7e-24	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-2131618_36	phrog_424	97.7	1.1e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2131618_36	UniRef90_A0A0D8IY92	393.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-2131618_36	665956.HMPREF1032_02557	392.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-2131618_36	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-2131618_36	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2131618_36	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-2131618_40	K18843	42.5	0.000000000011	hicB; antitoxin HicB	N/A
PHROG	UHGV-2131618_40	phrog_497	73.6	3.3e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2131618_40	UniRef90_UPI0019616193	216.0	0	type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-2131618_40	397287.C807_03671	211.0	0	Toxin-antitoxin system, antitoxin component, HicB family	N/A
Pfam	UHGV-2131618_40	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-2131618_40	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-2131618_40	PF15919,COG1598	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_41	phrog_353	81.6	5.6e-24	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2131618_41	UniRef90_A0A3E3K2T1	124.0	3.24e-36	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-2131618_41	1235792.C808_03054	119.0	7.46e-35	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-2131618_41	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-2131618_41	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-2131618_41	PF07927,COG1724	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_44	phrog_3064	80.3	1.8e-23	terminase	head and packaging
UniRef90	UHGV-2131618_44	UniRef90_UPI001CF3FC24	82.4	2.86e-16	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-2131618_44	1173749.S4TTT2_9CAUD	55.8	0.000000171	N/A	N/A
Pfam	UHGV-2131618_44	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-2131618_45	K06909	140.6	1.29998e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2131618_45	phrog_979	156.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-2131618_45	UniRef90_A0A0M2NDA4	614.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-2131618_45	1232449.BAHV02000016_gene1824	558.0	0	N/A	N/A
Pfam	UHGV-2131618_45	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-2131618_45	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2131618_45	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_47	phrog_156	109.5	1.8e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-2131618_47	1232449.BAHV02000016_gene1822	485.0	0	N/A	N/A
structural_annotation	UHGV-2131618_47	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_50	phrog_267	112.4	4.1e-33	major head protein	head and packaging
UniRef90	UHGV-2131618_50	UniRef90_A0A6N2YA79	155.0	1.66054e-42	P22 coat protein - gene protein 5	N/A
eggNOG-mapper	UHGV-2131618_50	445971.ANASTE_00718	303.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-2131618_50	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2131618_51	PF07100,COG4288	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_52	phrog_13046	142.2	2.49992e-42	N/A	unknown function
structural_annotation	UHGV-2131618_52	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_53	phrog_3287	188.7	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-2131618_53	1408437.JNJN01000002_gene1390	396.0	0	N/A	N/A
structural_annotation	UHGV-2131618_53	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-2131618_54	phrog_25468	114.1	0	N/A	unknown function
eggNOG-mapper	UHGV-2131618_54	1042156.CXIVA_01630	58.5	0.00000447	Peptidase_G2, IMC autoproteolytic cleavage domain	N/A
Pfam	UHGV-2131618_54	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-2131618_54	COG5295	N/A	N/A	Autotransporter adhesin	N/A
PHROG	UHGV-2131618_55	phrog_35892	95.9	2.4e-28	N/A	unknown function
Pfam	UHGV-2131618_55	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-2131618_58	PF10618	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2131618_60	1120998.AUFC01000030_gene2251	59.7	0.00000000012	N/A	N/A