UHGV-2144575 (vOTU-007512)

Viral Genome: UHGV-2144575

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-2144575
vOTU ID	vOTU-007512
Representative Genome?	Yes
Source	IMGVR4
Original Genome ID	3300029765\|Ga0243842_100034\|provirus_26785_66500
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.79 (High-quality)
Trimmed?	Yes
CheckV Viral Markers	6
CheckV Host Markers	3
Recoded?	No

Viral Content
geNomad score	0.9743
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	1.05
Jumbo Phage?	No

Genome Content
Length (bps)	37,839
GC Content	57.18%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	41
CDS Density	92%
Average CDS Length (bps)	846.00
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2144575_1	K10117	180.6	0	msmE; raffinose/stachyose/melibiose transport system substrate-binding protein	N/A
UniRef90	UHGV-2144575_1	UniRef90_A0A3F3JU02	1220.0	0	ABC transporter substrate-binding protein	N/A
eggNOG-mapper	UHGV-2144575_1	748224.HMPREF9436_01373	1099.0	0	Bacterial extracellular solute-binding protein	N/A
Pfam	UHGV-2144575_1	PF13416	N/A	N/A	Bacterial extracellular solute-binding protein	SBP_bac_8
COG	UHGV-2144575_1	COG0737	N/A	N/A	2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family	N/A
KOfam	UHGV-2144575_2	K14059	198.1	0	int; integrase	N/A
PHROG	UHGV-2144575_2	phrog_1	190.6	0	integrase	integration and excision
UniRef90	UHGV-2144575_2	UniRef90_E2ZI84	759.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-2144575_2	748224.HMPREF9436_01375	759.0	0	Phage integrase family	N/A
Pfam	UHGV-2144575_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2144575_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2144575_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-2144575_3	K06218	76.8	6.1e-22	relE, stbE; mRNA interferase RelE/StbE	N/A
PHROG	UHGV-2144575_3	phrog_1213	75.1	8.6e-22	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2144575_3	UniRef90_A0A6N7TR10	167.0	0	Type II toxin-antitoxin system RelE/ParE family toxin	N/A
eggNOG-mapper	UHGV-2144575_3	1235792.C808_03021	103.0	7.44e-28	Addiction module toxin, RelE StbE family	N/A
Pfam	UHGV-2144575_3	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
COG	UHGV-2144575_3	COG2026	N/A	N/A	mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system	N/A
structural_annotation	UHGV-2144575_3	PF05016,TIGR00053,COG2026	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2144575_4	1235792.C808_02931	82.4	1.59e-19	N/A	N/A
PHROG	UHGV-2144575_5	phrog_6988	133.8	5.8e-40	N/A	unknown function
UniRef90	UHGV-2144575_5	UniRef90_A0A6N7TNH0	287.0	0	N/A	N/A
eggNOG-mapper	UHGV-2144575_5	445974.CLORAM_02972	147.0	8.82818e-44	N/A	N/A
PADLOC	UHGV-2144575_5	ThsB1_00002	46.2	0.0000000000012	TIR-like	Thoeris
Pfam	UHGV-2144575_5	PF08937	N/A	N/A	Thoeris protein ThsB, TIR-like domain	ThsB_TIR
structural_annotation	UHGV-2144575_5	PF08937,MF_03036,TIGR03646,COG0758	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_6	phrog_419	82.6	2.4e-25	N/A	unknown function
UniRef90	UHGV-2144575_6	UniRef90_UPI001CBFD05B	122.0	2.88e-35	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-2144575_6	203119.Cthe_2457	102.0	3.55e-28	N/A	N/A
structural_annotation	UHGV-2144575_6	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_7	phrog_7395	127.6	5.7e-38	N/A	unknown function
UniRef90	UHGV-2144575_7	UniRef90_A0A6N7TQQ3	350.0	0	N/A	N/A
eggNOG-mapper	UHGV-2144575_7	270374.MELB17_05499	115.0	1.19e-30	N/A	N/A
Pfam	UHGV-2144575_7	PF14015	N/A	N/A	N/A	DUF4231
NCBIFam	UHGV-2144575_7	NF033634.1	N/A	N/A	SLATT domain-containing protein	N/A
KOfam	UHGV-2144575_9	K22300	81.8	1.1e-23	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2144575_9	phrog_8	62.5	1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-2144575_9	UniRef90_A0A396LL48	230.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2144575_9	665956.HMPREF1032_04076	97.4	4.92e-23	Peptidase S24-like	N/A
Pfam	UHGV-2144575_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2144575_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2144575_9	PF13560,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2144575_10	UniRef90_A0A2A6ZGP6	137.0	4.03994e-41	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-2144575_10	445972.ANACOL_00136	54.3	0.00000000843	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2144575_10	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-2144575_10	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2144575_12	1232443.BAIA02000032_gene1908	54.7	0.00000000612	N/A	N/A
UniRef90	UHGV-2144575_13	UniRef90_A0A6N7TQI5	166.0	0	Excisionase family DNA-binding protein	N/A
Pfam	UHGV-2144575_13	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-2144575_13	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-2144575_13	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2144575_14	PF13214,TIGR02501	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2144575_16	PF10735	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_17	phrog_24484	104.4	8.4e-31	N/A	unknown function
UniRef90	UHGV-2144575_18	UniRef90_A0A2A6ZGV7	95.1	3.03e-24	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-2144575_18	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_21	phrog_3584	107.8	9.5e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2144575_21	1211817.CCAT010000012_gene2727	70.9	0.0000000000521	N/A	N/A
UniRef90	UHGV-2144575_22	UniRef90_A0A844DP33	94.4	5.13e-23	SqdX protein	N/A
structural_annotation	UHGV-2144575_22	PF06530,MF_00674,TIGR01637,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-2144575_23	UniRef90_UPI00195E9406	78.2	0.0000000000000533	transposase	N/A
Pfam	UHGV-2144575_23	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
KOfam	UHGV-2144575_24	K06909	96.1	4.2e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2144575_24	phrog_979	210.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-2144575_24	UniRef90_A0A316SB77	922.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-2144575_24	748224.HMPREF9436_01395	1014.0	0	Terminase-like family	N/A
Pfam	UHGV-2144575_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-2144575_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2144575_24	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_25	phrog_156	322.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-2144575_25	748224.HMPREF9436_01396	1234.0	0	N/A	N/A
structural_annotation	UHGV-2144575_25	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_26	phrog_774	47.7	0.00000000000033	N/A	unknown function
eggNOG-mapper	UHGV-2144575_26	397290.C810_05225	50.4	0.000000756	N/A	N/A
KOfam	UHGV-2144575_27	K07584	63.5	2.1e-18	N/A	N/A
PHROG	UHGV-2144575_27	phrog_13908	163.5	0	N/A	unknown function
UniRef90	UHGV-2144575_27	UniRef90_A0A396LG63	802.0	0	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-2144575_27	748224.HMPREF9436_01398	838.0	0	Cysteine protease Prp	N/A
Pfam	UHGV-2144575_27	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-2144575_27	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2144575_27	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_28	phrog_1357	272.3	0	major head protein	head and packaging
UniRef90	UHGV-2144575_28	UniRef90_A0A2A6ZH28	600.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-2144575_28	748224.HMPREF9436_01399	671.0	0	N/A	N/A
Pfam	UHGV-2144575_28	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-2144575_28	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-2144575_28	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_29	phrog_15239	76.0	3.5e-22	N/A	unknown function
PHROG	UHGV-2144575_30	phrog_12105	68.3	1.2e-19	N/A	unknown function
PHROG	UHGV-2144575_31	phrog_511	187.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-2144575_31	748224.HMPREF9436_01402	1268.0	0	N/A	N/A
structural_annotation	UHGV-2144575_31	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-2144575_32	UniRef90_A0A329TFM2	70.1	0.0000000000000128	Rho-GAP domain-containing protein	N/A
eggNOG-mapper	UHGV-2144575_33	748224.HMPREF9436_01404	275.0	0	lysozyme activity	N/A
COG	UHGV-2144575_33	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-2144575_34	748224.HMPREF9436_01405	762.0	0	lysozyme activity	N/A
COG	UHGV-2144575_34	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2144575_34	MF_02066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2144575_35	748224.HMPREF9436_01406	261.0	0	N/A	N/A
PHROG	UHGV-2144575_36	phrog_22978	123.5	1.3e-37	N/A	unknown function
UniRef90	UHGV-2144575_36	UniRef90_E2ZIB5	4611.0	0	Putative septum site-determining protein MinC	N/A
eggNOG-mapper	UHGV-2144575_36	748224.HMPREF9436_01406	4611.0	0	N/A	N/A
Pfam	UHGV-2144575_36	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
eggNOG-mapper	UHGV-2144575_37	748224.HMPREF9436_01407	830.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-2144575_37	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_39	phrog_28526	97.8	4.7e-29	N/A	unknown function
UniRef90	UHGV-2144575_39	UniRef90_UPI00156FE2AD	73.9	1.67e-16	N/A	N/A
eggNOG-mapper	UHGV-2144575_39	748224.HMPREF9436_00155	96.7	2.75e-26	N/A	N/A
Pfam	UHGV-2144575_39	PF04255	N/A	N/A	N/A	DUF433
KOfam	UHGV-2144575_40	K08640	97.4	2.3e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-2144575_40	phrog_894	115.9	4e-34	endolysin	lysis
UniRef90	UHGV-2144575_40	UniRef90_A0A1C5NY12	279.0	0	Zinc D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-2144575_40	748224.HMPREF9436_03320	274.0	0	Peptidase M15	N/A
Pfam	UHGV-2144575_40	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-2144575_40	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2144575_40	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-2144575_41	phrog_199	90.7	1.5e-26	holin	lysis
UniRef90	UHGV-2144575_41	UniRef90_A0A2A6Z8T2	261.0	0	Holin	N/A
eggNOG-mapper	UHGV-2144575_41	742740.HMPREF9474_02333	192.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-2144575_41	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2144575_41	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2144575_41	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2144575_41	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A