Viral OTU vOTU-000678

vOTU: vOTU-000678

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-000678
Number of Genomes	14
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00345 → vSUBGEN-02296 → vOTU-000678
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1357731
Biosample ID	SAMEA3665196
Length	41,708 bps
CheckV Completeness	100.00% (Complete)
CDS Count	60
CDS Density	94.47%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1357731_1	K06400	345.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1357731_1	phrog_95	341.6	0	integrase	integration and excision
UniRef90	UHGV-1357731_1	UniRef90_G4KP73	464.0	0	Putative site-specific recombinase	N/A
eggNOG-mapper	UHGV-1357731_1	693746.OBV_21880	464.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1357731_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1357731_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1357731_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1357731_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1357731_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1357731_2	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-1357731_2	PF12844,MF_00535,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1357731_5	K18830	61.0	3e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1357731_5	phrog_8	57.8	2.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1357731_5	UniRef90_E2ZIF0	108.0	7.79e-28	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1357731_5	748224.HMPREF9436_01444	108.0	1.31e-28	N/A	N/A
PADLOC	UHGV-1357731_5	retron_type_VI_hth_cluster2_1	45.6	0.0000000000017	N/A	Retron
Pfam	UHGV-1357731_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1357731_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1357731_5	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_12	phrog_190	111.3	7.9e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357731_12	UniRef90_A0A4D7AZG9	122.0	3.1e-33	N/A	N/A
eggNOG-mapper	UHGV-1357731_12	693746.OBV_25250	120.0	1.52e-32	N/A	N/A
Pfam	UHGV-1357731_12	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1357731_12	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1357731_16	K00571	101.8	8.1e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1357731_16	phrog_23224	179.9	0	DNA methyltransferase	other
UniRef90	UHGV-1357731_16	UniRef90_A0A329TLK1	355.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1357731_16	718252.FP2_06750	354.0	0	DNA methylase	N/A
PADLOC	UHGV-1357731_16	MTase_II_00172	97.5	1.4e-30	Type II methyltransferase	RM
Pfam	UHGV-1357731_16	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1357731_16	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1357731_16	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1357731_18	K00390	93.0	2.5e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1357731_18	phrog_424	115.3	4.9e-34	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1357731_18	UniRef90_A0A3D3Y454	456.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-1357731_18	1408437.JNJN01000032_gene2312	329.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1357731_18	BrxP_00001	68.9	1.2e-21	BrxP	BREX
Pfam	UHGV-1357731_18	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1357731_18	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1357731_18	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_22	phrog_38832	46.3	6.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1357731_22	665956.HMPREF1032_03087	64.7	0.0000000000413	N/A	N/A
structural_annotation	UHGV-1357731_22	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_26	phrog_599	45.6	0.0000000000015	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1357731_26	UniRef90_A0A317UED7	58.2	0.000000000862	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-1357731_26	10704.B4UTV4_BP163	48.9	0.00000353	N/A	N/A
Pfam	UHGV-1357731_26	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1357731_26	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-1357731_26	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1357731_26	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_27	phrog_22543	40.8	0.000000000042	N/A	unknown function
PHROG	UHGV-1357731_30	phrog_3584	119.2	2.8e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1357731_30	537013.CLOSTMETH_02141	85.1	1.73e-17	N/A	N/A
structural_annotation	UHGV-1357731_30	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_32	phrog_606	69.8	4.2e-20	terminase small subunit	head and packaging
UniRef90	UHGV-1357731_32	UniRef90_UPI00195648BB	139.0	1.51e-39	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1357731_32	397290.C810_05185	124.0	3.1e-34	DNA-packaging protein gp3	N/A
Pfam	UHGV-1357731_32	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1357731_32	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1357731_33	K06909	139.2	3.69999e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1357731_33	phrog_979	131.6	1.50001e-40	terminase large subunit	head and packaging
UniRef90	UHGV-1357731_33	UniRef90_A0A3D5TIM8	638.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1357731_33	1410650.JHWL01000003_gene2834	615.0	0	N/A	N/A
Pfam	UHGV-1357731_33	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1357731_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1357731_33	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_34	phrog_511	237.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1357731_34	1410650.JHWL01000003_gene2827	299.0	0	N/A	N/A
structural_annotation	UHGV-1357731_34	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357731_35	537007.BLAHAN_05255	73.9	0.0000000000292	N/A	N/A
Pfam	UHGV-1357731_36	PF00041	N/A	N/A	Fibronectin type III domain	fn3
structural_annotation	UHGV-1357731_36	PF00041,NF010681,COG3979	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357731_37	PF21683	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_39	phrog_156	309.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1357731_39	1410650.JHWL01000003_gene2833	543.0	0	N/A	N/A
structural_annotation	UHGV-1357731_39	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_40	phrog_13908	130.9	8.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-1357731_40	1410650.JHWL01000003_gene2831	91.7	1.25e-18	N/A	N/A
PHROG	UHGV-1357731_41	phrog_1357	216.1	0	major head protein	head and packaging
UniRef90	UHGV-1357731_41	UniRef90_A0A2V2CFL5	358.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1357731_41	1410650.JHWL01000003_gene2830	280.0	0	N/A	N/A
NCBIFam	UHGV-1357731_41	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1357731_41	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_43	phrog_12105	113.5	1.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-1357731_43	1519439.JPJG01000060_gene1891	70.9	0.0000000000000496	N/A	N/A
eggNOG-mapper	UHGV-1357731_44	1410650.JHWL01000003_gene2815	125.0	3.85e-29	N/A	N/A
PHROG	UHGV-1357731_45	phrog_22978	128.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1357731_45	1408437.JNJN01000039_gene389	496.0	0	heme binding	N/A
Pfam	UHGV-1357731_45	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-1357731_45	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-1357731_46	phrog_33872	64.1	1.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-1357731_46	693746.OBV_19740	64.7	0.00000000000315	N/A	N/A
structural_annotation	UHGV-1357731_47	PF18962,NF011773	N/A	N/A	N/A	N/A
KOfam	UHGV-1357731_48	K19719	148.0	1.26117e-44	COL2A; collagen type II alpha	N/A
PHROG	UHGV-1357731_48	phrog_3420	91.3	3.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1357731_48	1519439.JPJG01000060_gene1892	114.0	1.15e-24	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1357731_48	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1357731_48	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1357731_49	phrog_35892	83.4	0	N/A	unknown function
UniRef90	UHGV-1357731_49	UniRef90_A0A843FMD8	170.0	5.74532e-44	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-1357731_49	471875.RUMLAC_02240	142.0	8.16e-35	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-1357731_49	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-1357731_49	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-1357731_49	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357731_49	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_51	phrog_27545	150.0	8.40779e-45	N/A	unknown function
UniRef90	UHGV-1357731_51	UniRef90_D1PRE7	168.0	0	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-1357731_51	411471.SUBVAR_06976	168.0	0	N/A	N/A
Pfam	UHGV-1357731_51	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1357731_52	phrog_937	55.8	9.5e-16	hemolysin	other
eggNOG-mapper	UHGV-1357731_52	1519439.JPJG01000023_gene533	72.8	0.00000000000000178	N/A	N/A
PHROG	UHGV-1357731_54	phrog_918	122.5	1.1e-36	N/A	unknown function
UniRef90	UHGV-1357731_54	UniRef90_UPI0019517842	119.0	4.48e-33	N/A	N/A
eggNOG-mapper	UHGV-1357731_54	632112.C1KFI4_9CAUD	118.0	3.66e-33	N/A	N/A
Pfam	UHGV-1357731_54	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1357731_54	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1357731_55	phrog_13256	73.2	2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1357731_55	1226322.HMPREF1545_00166	68.6	0.0000000000000258	N/A	N/A
KOfam	UHGV-1357731_56	K01447	115.7	6e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1357731_56	phrog_670	116.4	3e-34	endolysin	lysis
UniRef90	UHGV-1357731_56	UniRef90_A0A1V5KCB7	258.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-1357731_56	1235802.C823_05611	167.0	0	Ami_2	N/A
Pfam	UHGV-1357731_56	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1357731_56	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1357731_56	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-1357731_57	UniRef90_A0A843IZ65	66.2	0.000000000000754	Sigma70_r4 domain-containing protein	N/A
structural_annotation	UHGV-1357731_57	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357731_60	1378168.N510_03079	55.1	0.000000426	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1357731	Yes	41,708	57	100	1
UHGV-0086372	No	41,266	57	100	1
UHGV-1360699	No	41,266	57	100	1
UHGV-2148980	No	41,266	57	100	1
UHGV-1367944	No	41,127	57	100	1
UHGV-1367315	No	41,002	57	100	1
UHGV-1367318	No	41,002	57	100	1
UHGV-1367984	No	41,002	57	100	1
UHGV-1943602	No	41,002	57	100	1
UHGV-2227196	No	40,832	57	100	1
UHGV-0211851	No	43,645	57	100	1
UHGV-1473159	No	41,503	57	100	1
UHGV-1433960	No	40,193	57	96	1
UHGV-1434694	No	32,115	58	77	1