Viral OTU vOTU-002616

vOTU: vOTU-002616

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-002616
Number of Genomes	9
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00131 → vSUBFAM-08593 → vGENUS-23983 → vSUBGEN-47004 → vOTU-002616
Host Lineage
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-2173307
Biosample ID	N/A
Length	38,633 bps
CheckV Completeness	100.00% (Complete)
CDS Count	49
CDS Density	88.98%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2173307_1	phrog_19415	43.6	0.000000000005	N/A	unknown function
Pfam	UHGV-2173307_1	PF19808	N/A	N/A	N/A	DUF6291
KOfam	UHGV-2173307_5	K07455	136.9	2.6e-40	recT; recombination protein RecT	N/A
PHROG	UHGV-2173307_5	phrog_148	123.0	2.3e-36	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2173307_5	UniRef90_I8RKJ4	145.0	3.48e-38	RecT protein	N/A
eggNOG-mapper	UHGV-2173307_5	1122947.FR7_2503	145.0	5.83e-39	Recombinase, phage RecT family	N/A
Pfam	UHGV-2173307_5	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-2173307_5	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-2173307_5	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-2173307_5	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-2173307_6	phrog_434	180.1	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2173307_6	UniRef90_UPI00101CC8D9	123.0	3.64e-29	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-2173307_6	886379.AEWI01000001_gene1768	117.0	1.18e-27	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-2173307_6	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-2173307_6	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-2173307_6	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-2173307_12	K19721	43.0	0.0000000000011	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-2173307_12	phrog_819	58.3	1.1e-16	tail protein	tail
eggNOG-mapper	UHGV-2173307_12	97139.C824_05954	63.9	0.000000181	N/A	N/A
Pfam	UHGV-2173307_12	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-2173307_15	K06909	78.9	6.9e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2173307_15	phrog_979	74.5	2.7e-24	terminase large subunit	head and packaging
UniRef90	UHGV-2173307_15	UniRef90_UPI001C8A648C	90.5	7.39e-16	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2173307_15	269482.Bcep1808_1170	72.8	0.0000000000703	ATP-binding protein	N/A
Pfam	UHGV-2173307_15	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-2173307_15	COG5323	N/A	N/A	Phage large terminase packaging protein	N/A
structural_annotation	UHGV-2173307_15	PF04466,PF17289,MF_04145,TIGR01547,COG5323	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2173307_16	PF07030,COG4387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2173307_17	1127696.HMPREF9134_00820	57.0	0.00000652	N/A	N/A
COG	UHGV-2173307_17	COG4383	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2173307_17	PF06074,MF_04135,TIGR01537,COG4383	N/A	N/A	N/A	N/A
UniRef90	UHGV-2173307_19	UniRef90_UPI001C3DA45F	63.2	0.00000000227	phage holin family protein	N/A
eggNOG-mapper	UHGV-2173307_19	679935.Alfi_2717	81.6	3.4e-17	N/A	N/A
Pfam	UHGV-2173307_19	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-2173307_19	PF05105	N/A	N/A	N/A	N/A
KOfam	UHGV-2173307_20	K06904	54.7	0.0000000000000013	N/A	N/A
PHROG	UHGV-2173307_20	phrog_11321	98.7	4.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-2173307_20	762968.HMPREF9441_02374	83.6	0.0000000000000321	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-2173307_20	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-2173307_20	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-2173307_20	PF19821,PF04586,MF_04119,TIGR04387,TIGR01543,COG3740,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-2173307_22	PF10758	N/A	N/A	N/A	DUF2586
structural_annotation	UHGV-2173307_22	PF10758,COG3497	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2173307_23	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2173307_25	PF20155	N/A	N/A	N/A	N/A
COG	UHGV-2173307_27	COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2173307_27	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2173307_28	1347393.HG726020_gene1165	65.9	0.000000000196	N/A	N/A
structural_annotation	UHGV-2173307_28	TIGR01644,COG4540	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2173307_29	PF10934,COG4381	N/A	N/A	N/A	N/A
Pfam	UHGV-2173307_30	PF01476	N/A	N/A	LysM domain	LysM
eggNOG-mapper	UHGV-2173307_31	1121097.JCM15093_1726	59.3	0.000000204	N/A	N/A
structural_annotation	UHGV-2173307_31	PF03434,COG3948	N/A	N/A	N/A	N/A
PHROG	UHGV-2173307_33	phrog_892	53.1	0.0000000000000048	tail fiber protein	tail
PHROG	UHGV-2173307_34	phrog_15610	119.3	1.2e-35	protease	other
UniRef90	UHGV-2173307_34	UniRef90_A0A0J6CFE9	118.0	2.34e-32	Membrane protein	N/A
eggNOG-mapper	UHGV-2173307_34	1347393.HG726024_gene2889	132.0	6.48e-39	N/A	N/A
PHROG	UHGV-2173307_35	phrog_26448	42.6	0.000000000000025	N/A	unknown function
Pfam	UHGV-2173307_35	PF20647	N/A	N/A	N/A	DUF6808
structural_annotation	UHGV-2173307_35	PF20647	N/A	N/A	N/A	N/A
KOfam	UHGV-2173307_36	K08640	80.4	3.7e-23	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-2173307_36	phrog_894	60.0	4e-17	endolysin	lysis
UniRef90	UHGV-2173307_36	UniRef90_Q64PK4	199.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2173307_36	547042.BACCOPRO_00949	174.0	0	Peptidase M15	N/A
Pfam	UHGV-2173307_36	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-2173307_36	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2173307_36	PF08291,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-2173307_37	phrog_503	91.9	6.1e-27	N/A	unknown function
UniRef90	UHGV-2173307_37	UniRef90_UPI001F29D757	81.3	9.93e-18	endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-2173307_37	1122931.AUAE01000010_gene4486	81.3	1.71e-18	Protein conserved in bacteria	N/A
COG	UHGV-2173307_37	COG2852	N/A	N/A	Very-short-patch-repair endonuclease	N/A
structural_annotation	UHGV-2173307_37	PF04480,NF007294,COG2852	N/A	N/A	N/A	N/A
KOfam	UHGV-2173307_38	K04047	72.1	7.7e-21	dps; starvation-inducible DNA-binding protein	N/A
PHROG	UHGV-2173307_38	phrog_3636	78.6	8.3e-23	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2173307_38	UniRef90_C7MNM9	58.2	0.0000000551	DNA-binding ferritin-like protein (Oxidative damage protectant)	N/A
eggNOG-mapper	UHGV-2173307_38	469378.Ccur_08150	58.2	0.00000000925	Belongs to the Dps family	N/A
Pfam	UHGV-2173307_38	PF00210	N/A	N/A	Ferritin-like domain	Ferritin
COG	UHGV-2173307_38	COG0783	N/A	N/A	DNA-binding ferritin-like protein (oxidative damage protectant)	N/A
structural_annotation	UHGV-2173307_38	PF00210,MF_01441,NF006975,COG0783	N/A	N/A	N/A	N/A
PHROG	UHGV-2173307_42	phrog_874	89.6	2.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-2173307_42	762968.HMPREF9441_00541	165.0	0	N/A	N/A
structural_annotation	UHGV-2173307_42	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-2173307_44	phrog_8684	88.7	2.3e-26	N/A	unknown function
UniRef90	UHGV-2173307_44	UniRef90_A0A3D1NTC7	142.0	9.32004e-41	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-2173307_44	40522.A8ASP1_BPA50	87.8	5.66e-20	YopX protein	N/A
Pfam	UHGV-2173307_44	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-2173307_44	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-2173307_44	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2173307_47	742725.HMPREF9450_02085	187.0	0	N/A	N/A
KOfam	UHGV-2173307_48	K00571	112.7	3.7e-33	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2173307_48	phrog_23224	184.2	0	DNA methyltransferase	other
UniRef90	UHGV-2173307_48	UniRef90_UPI001B39CDDA	469.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-2173307_48	888049.HMPREF8578_0680	313.0	0	DNA methylase	N/A
PADLOC	UHGV-2173307_48	MTase_II_00172	106.4	5.4e-33	Type II methyltransferase	RM
Pfam	UHGV-2173307_48	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2173307_48	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-2173307_48	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2173307	Yes	38,633	51	100	1
UHGV-0087092	No	38,567	51	100	1
UHGV-0369999	No	37,570	51	100	1
UHGV-2078533	No	39,436	51	100	1
UHGV-1451821	No	38,664	51	100	1
UHGV-1406297	No	37,434	51	99	1
UHGV-0056677	No	35,265	52	93	1
UHGV-1501223	No	35,265	52	93	1
UHGV-1427333	No	24,098	51	64	1