Viral OTU vOTU-003646

vOTU: vOTU-003646

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-003646
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00172 → vGENUS-00333 → vSUBGEN-14664 → vOTU-003646
Host Lineage	Bacteria → Bacteroidota
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1379971
Biosample ID	SAMN02334069
Length	42,840 bps
CheckV Completeness	100.00% (Complete)
CDS Count	69
CDS Density	90.45%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1379971_2	phrog_7566	90.1	1.5e-26	N/A	unknown function
UniRef90	UHGV-1379971_2	UniRef90_A0A417GG52	133.0	1.48e-38	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1379971_2	1410650.JHWL01000003_gene2846	51.2	0.000000545	N/A	N/A
PHROG	UHGV-1379971_3	phrog_72	51.1	0.000000000000015	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1379971_3	411468.CLOSCI_00314	135.0	1.53e-37	N/A	N/A
structural_annotation	UHGV-1379971_3	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_4	phrog_155	119.8	2.3e-35	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379971_4	UniRef90_A0A1C6CBK6	264.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-1379971_4	1304866.K413DRAFT_1196	231.0	0	ERF superfamily	N/A
Pfam	UHGV-1379971_4	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-1379971_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1379971_4	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_7	phrog_5070	189.4	0	N/A	unknown function
UniRef90	UHGV-1379971_7	UniRef90_UPI00189ACE43	106.0	1.05e-24	polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-1379971_7	768710.DesyoDRAFT_1067	129.0	1.21e-34	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-1379971_7	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-1379971_7	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
KOfam	UHGV-1379971_12	K22299	60.4	4.5e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1379971_12	phrog_8	53.7	0.0000000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-1379971_12	UniRef90_A0A1C6C9V1	219.0	0	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-1379971_12	665956.HMPREF1032_00148	99.8	2.25e-25	N/A	N/A
PADLOC	UHGV-1379971_12	retron_type_VI_hth_cluster2_1	50.3	0.000000000000056	N/A	Retron
Pfam	UHGV-1379971_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1379971_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1379971_12	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1379971_14	K07448	110.6	1.5e-32	mrr; restriction system protein	N/A
UniRef90	UHGV-1379971_14	UniRef90_A0A1C6C9M8	594.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1379971_14	1121115.AXVN01000017_gene270	138.0	5.34e-36	Restriction endonuclease	N/A
PADLOC	UHGV-1379971_14	ZorD1_00005	49.0	0.000000000000049	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1379971_14	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1379971_14	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
KOfam	UHGV-1379971_15	K14059	147.1	2.00386e-43	int; integrase	N/A
PHROG	UHGV-1379971_15	phrog_1	144.0	1.3999e-42	integrase	integration and excision
UniRef90	UHGV-1379971_15	UniRef90_A0A1C6C970	718.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1379971_15	1304866.K413DRAFT_1180	386.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1379971_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1379971_15	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1379971_15	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1379971_16	K17733	157.0	0	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-1379971_16	phrog_2649	136.8	1.8e-40	endolysin	lysis
UniRef90	UHGV-1379971_16	UniRef90_A0A1C5W0J0	485.0	0	Peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	N/A
eggNOG-mapper	UHGV-1379971_16	742733.HMPREF9469_01368	322.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
AcrCatalog	UHGV-1379971_16	cluster_9940	83.6	5.62e-22	NA	N/A
Pfam	UHGV-1379971_16	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-1379971_16	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-1379971_16	PF02557,PF19127,MF_01924,NF007557,TIGR04035,COG2173	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379971_17	UniRef90_UPI0011C22E1E	181.0	0	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-1379971_17	742733.HMPREF9469_00967	73.6	0.0000000000173	N/A	N/A
structural_annotation	UHGV-1379971_17	PF00041,NF033814,COG3979	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379971_19	411902.CLOBOL_00122	119.0	1.33e-32	N/A	N/A
PHROG	UHGV-1379971_20	phrog_18725	72.1	8.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-1379971_20	411902.CLOBOL_00123	152.0	1.4013e-45	N/A	N/A
PHROG	UHGV-1379971_21	phrog_32744	171.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1379971_21	411902.CLOBOL_00124	684.0	0	N/A	N/A
structural_annotation	UHGV-1379971_21	PF14594,PF21114,MF_00813,NF033848,TIGR02961,COG4379,COG4266	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_22	phrog_1194	59.9	3.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-1379971_22	411902.CLOBOL_00125	136.0	1.54e-39	N/A	N/A
structural_annotation	UHGV-1379971_22	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_23	phrog_1535	210.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1379971_23	UniRef90_A0A1C6CG40	1045.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1379971_23	411459.RUMOBE_01384	204.0	0	phage tail tape measure protein	N/A
COG	UHGV-1379971_23	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1379971_24	phrog_706	124.9	5.7e-37	N/A	unknown function
UniRef90	UHGV-1379971_24	UniRef90_A0A1C6CG51	300.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1379971_24	411459.RUMOBE_01383	190.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1379971_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1379971_24	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_25	phrog_11299	69.2	5.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-1379971_25	476272.RUMHYD_01783	79.3	7.39e-17	N/A	N/A
structural_annotation	UHGV-1379971_25	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_26	phrog_3099	123.2	1.9e-36	N/A	unknown function
eggNOG-mapper	UHGV-1379971_26	33035.JPJF01000106_gene3126	199.0	0	N/A	N/A
structural_annotation	UHGV-1379971_26	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_27	phrog_3266	94.8	6.7e-28	tail completion	connector
eggNOG-mapper	UHGV-1379971_27	476272.RUMHYD_01781	144.0	1.16994e-41	N/A	N/A
structural_annotation	UHGV-1379971_27	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_28	phrog_556	65.4	1.4e-19	minor head protein	head and packaging
UniRef90	UHGV-1379971_28	UniRef90_UPI0008B4CFF0	231.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1379971_28	476272.RUMHYD_01780	179.0	0	N/A	N/A
Pfam	UHGV-1379971_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1379971_28	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_29	phrog_3366	97.2	1.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1379971_29	476272.RUMHYD_01779	144.0	5.91068e-42	N/A	N/A
structural_annotation	UHGV-1379971_29	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_31	phrog_8680	229.3	0	N/A	unknown function
UniRef90	UHGV-1379971_31	UniRef90_A0A412EKN2	409.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379971_31	411470.RUMGNA_02208	291.0	0	N/A	N/A
Pfam	UHGV-1379971_31	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1379971_31	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_32	phrog_18218	138.5	1.70006e-41	N/A	unknown function
UniRef90	UHGV-1379971_32	UniRef90_A0A8D9PGR5	154.0	0	Holin	N/A
eggNOG-mapper	UHGV-1379971_32	411902.CLOBOL_03424	82.4	6.07e-19	N/A	N/A
structural_annotation	UHGV-1379971_32	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_33	phrog_355	55.0	0.0000000000000014	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379971_33	UniRef90_UPI0018A09237	152.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379971_33	397290.C810_05229	141.0	1.56945e-42	N/A	N/A
Pfam	UHGV-1379971_33	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1379971_33	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_35	phrog_541	88.8	3.1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-1379971_35	642492.Clole_0822	66.2	0.00000000000929	N/A	N/A
PHROG	UHGV-1379971_36	phrog_247	282.8	0	major head protein	head and packaging
UniRef90	UHGV-1379971_36	UniRef90_A0A3R6K7E9	681.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-1379971_36	1292035.H476_1014	408.0	0	N/A	N/A
COG	UHGV-1379971_36	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-1379971_36	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379971_37	UniRef90_UPI001C0EBA51	261.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1379971_37	742765.HMPREF9457_02126	85.9	4.23e-18	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1379971_39	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_40	phrog_20016	69.2	4.8e-20	N/A	unknown function
UniRef90	UHGV-1379971_40	UniRef90_A0A316MV88	219.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1379971_40	1226322.HMPREF1545_00077	68.2	0.0000000000014	N/A	N/A
structural_annotation	UHGV-1379971_40	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379971_42	476272.RUMHYD_01770	79.7	0.00000000000000238	N/A	N/A
PHROG	UHGV-1379971_44	phrog_21718	70.2	3.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-1379971_44	1235790.C805_00058	100.0	1.32e-24	N/A	N/A
UniRef90	UHGV-1379971_45	UniRef90_A0A416S3A4	125.0	5.41e-35	CTP synthase	N/A
eggNOG-mapper	UHGV-1379971_45	476272.RUMHYD_01766	68.2	0.000000000000185	N/A	N/A
PHROG	UHGV-1379971_46	phrog_581	251.8	0	minor head protein	head and packaging
UniRef90	UHGV-1379971_46	UniRef90_A0A1C6CDG2	676.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1379971_46	33035.JPJF01000106_gene3134	434.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1379971_46	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1379971_46	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379971_46	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_47	phrog_533	268.5	0	portal protein	head and packaging
UniRef90	UHGV-1379971_47	UniRef90_A0A1C6CDM8	779.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1379971_47	33035.JPJF01000106_gene3135	502.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1379971_47	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1379971_48	K06909	428.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1379971_48	phrog_3717	165.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1379971_48	UniRef90_A0A1C6CDG5	869.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1379971_48	33035.JPJF01000106_gene3136	729.0	0	Terminase small subunit	N/A
Pfam	UHGV-1379971_48	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1379971_48	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1379971_48	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1379971_48	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1379971_48	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1379971_48	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_49	phrog_33130	104.5	3.8e-31	N/A	unknown function
UniRef90	UHGV-1379971_49	UniRef90_A0A3B9CD52	80.5	4.58e-18	S1-like domain-containing protein	N/A
structural_annotation	UHGV-1379971_49	PF10922,MF_00839	N/A	N/A	N/A	N/A
COG	UHGV-1379971_52	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
KOfam	UHGV-1379971_55	K04763	178.8	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1379971_55	phrog_1	154.7	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-1379971_55	UniRef90_UPI001D14C144	405.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1379971_55	1298920.KI911353_gene2699	335.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1379971_55	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1379971_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1379971_55	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1379971_55	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379971_57	PF02888	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379971_58	411473.RUMCAL_02525	119.0	2.07e-33	N/A	N/A
KOfam	UHGV-1379971_59	K00558	229.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1379971_59	phrog_116	254.5	0	DNA methyltransferase	other
UniRef90	UHGV-1379971_59	UniRef90_A0A1C5MBD4	804.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1379971_59	1499683.CCFF01000017_gene2594	451.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1379971_59	MTase_II_00058	192.1	0	Type II methyltransferase	RM
Pfam	UHGV-1379971_59	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1379971_59	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1379971_59	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1379971_59	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_61	phrog_15198	41.1	0.000000000021	N/A	unknown function
UniRef90	UHGV-1379971_61	UniRef90_A0A3R6TD05	125.0	3.02e-34	N/A	N/A
Pfam	UHGV-1379971_61	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1379971_61	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379971_63	PF09870,COG4466	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379971_64	PF04936	N/A	N/A	N/A	N/A
PHROG	UHGV-1379971_65	phrog_25231	41.3	0.000000000019	N/A	unknown function
structural_annotation	UHGV-1379971_65	PF04936	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379971_66	411459.RUMOBE_01385	64.7	0.000000000003	N/A	N/A
PHROG	UHGV-1379971_67	phrog_15768	123.2	0	N/A	unknown function
UniRef90	UHGV-1379971_67	UniRef90_C0DA60	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379971_67	33035.JPJF01000122_gene2459	108.0	2.83e-26	N/A	N/A
AcrCatalog	UHGV-1379971_67	cluster_38323	193.0	0	NA	N/A
Pfam	UHGV-1379971_67	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1379971_67	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1379971_68	K01160	42.0	0.000000000023	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1379971_68	phrog_1682	58.8	1e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379971_68	UniRef90_R5GFL1	174.0	0	Putative prophage Lp2 protein 24	N/A
eggNOG-mapper	UHGV-1379971_68	1235790.C805_00029	104.0	1.15e-27	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1379971_68	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1379971_68	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1379971	Yes	42,840	48	100	1
UHGV-1374618	No	42,840	48	100	1