Viral OTU vOTU-004318

vOTU: vOTU-004318

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-004318
Number of Genomes	8
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00067 → vGENUS-06309 → vSUBGEN-25060 → vOTU-004318
Host Lineage	Bacteria → Firmicutes_A
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1365620
Biosample ID	SAMN00036881
Length	39,375 bps
CheckV Completeness	100.00% (Complete)
CDS Count	73
CDS Density	91.49%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1365620_1	K14059	102.6	6.4e-30	int; integrase	N/A
PHROG	UHGV-1365620_1	phrog_1	119.3	4.4e-35	integrase	integration and excision
UniRef90	UHGV-1365620_1	UniRef90_R7NSV6	134.0	9.35e-32	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1365620_1	1161902.HMPREF0378_0144	94.4	2.06e-18	DNA integration	N/A
Pfam	UHGV-1365620_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1365620_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1365620_1	PF00589,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_2	phrog_87	73.4	2.4e-21	metallo-protease	other
UniRef90	UHGV-1365620_2	UniRef90_R5PN39	103.0	6.47e-26	N/A	N/A
eggNOG-mapper	UHGV-1365620_2	1347392.CCEZ01000005_gene1204	74.3	0.00000000000000631	Zn peptidase	N/A
Pfam	UHGV-1365620_2	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1365620_2	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1365620_2	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_3	phrog_9605	331.7	0	N/A	unknown function
UniRef90	UHGV-1365620_3	UniRef90_R6MZH4	365.0	0	N/A	N/A
eggNOG-mapper	UHGV-1365620_3	1122216.AUHW01000007_gene1474	254.0	0	N/A	N/A
Pfam	UHGV-1365620_3	PF12358	N/A	N/A	N/A	DUF3644
Pfam	UHGV-1365620_3	PF18740	N/A	N/A	EC042_2821-like Restriction Endonuclease-like domain	EC042_2821
structural_annotation	UHGV-1365620_3	PF12358,COG1895	N/A	N/A	N/A	N/A
KOfam	UHGV-1365620_4	K22299	44.2	0.0000000000041	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1365620_4	phrog_2967	56.5	4.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1365620_4	UniRef90_A0A2B7YNI4	78.2	3.21e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1365620_4	1201292.DR75_340	78.6	1.01e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1365620_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1365620_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1365620_4	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1365620_5	UniRef90_A0A396PLE3	65.9	0.00000000000181	N/A	N/A
eggNOG-mapper	UHGV-1365620_5	1215915.BN193_09250	63.5	0.0000000000028	N/A	N/A
Pfam	UHGV-1365620_5	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-1365620_5	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1365620_5	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1365620_11	K06284	69.7	4.2e-20	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-1365620_11	phrog_4681	61.5	9.1e-18	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1365620_11	UniRef90_R6Y144	81.3	1.23e-18	Transcriptional regulator AbrB family	N/A
eggNOG-mapper	UHGV-1365620_11	574376.BAMA_10335	65.5	0.00000000000056	SpoVT / AbrB like domain	N/A
Pfam	UHGV-1365620_11	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
Pfam	UHGV-1365620_11	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-1365620_11	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
PHROG	UHGV-1365620_13	phrog_253	122.5	3e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365620_13	UniRef90_UPI001EE9764E	123.0	7.82e-33	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1365620_13	1449050.JNLE01000005_gene3949	102.0	2.17e-25	Siphovirus Gp157	N/A
Pfam	UHGV-1365620_13	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1365620_13	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_14	phrog_155	131.9	4.7e-39	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365620_14	UniRef90_A0A3D1PJF8	284.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1365620_14	1304866.K413DRAFT_1196	223.0	0	ERF superfamily	N/A
Pfam	UHGV-1365620_14	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-1365620_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1365620_14	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1365620_15	K03111	143.4	2.40042e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1365620_15	phrog_44	150.7	7.00649e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365620_15	UniRef90_R6B7C1	192.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1365620_15	509191.AEDB02000052_gene1361	160.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1365620_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1365620_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1365620_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1365620_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1365620_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_16	phrog_72	65.8	7.3e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1365620_16	445972.ANACOL_00148	63.2	0.000000000272	N/A	N/A
Pfam	UHGV-1365620_16	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-1365620_16	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_17	phrog_7566	60.3	3.2e-17	N/A	unknown function
PHROG	UHGV-1365620_18	phrog_186	47.3	0.00000000000031	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365620_18	UniRef90_A0A2K9P1I8	150.0	6.54e-41	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1365620_18	1139219.I569_00217	127.0	1.21e-32	Replication initiation and membrane attachment	N/A
COG	UHGV-1365620_18	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1365620_18	PF04492,MF_01911,TIGR01610,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1365620_19	K02314	325.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1365620_19	phrog_19	258.9	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1365620_19	UniRef90_R5ZPV6	513.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1365620_19	796940.HMPREF9628_01758	206.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1365620_19	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1365620_19	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1365620_19	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1365620_19	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_22	phrog_1123	53.8	0.0000000000000029	N/A	unknown function
UniRef90	UHGV-1365620_22	UniRef90_A0A7U3NJT7	66.6	0.00000000000738	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-1365620_22	1449126.JQKL01000003_gene1710	63.5	0.0000000000135	N/A	N/A
structural_annotation	UHGV-1365620_22	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_24	PF15188	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_25	phrog_1770	43.6	0.0000000000059	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1365620_25	536233.CLO_1822	133.0	3.08e-38	N/A	N/A
structural_annotation	UHGV-1365620_25	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_27	PF09871,TIGR00739	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_28	phrog_23490	50.6	0.000000000000015	N/A	unknown function
UniRef90	UHGV-1365620_28	UniRef90_R6RLI7	51.6	0.000000922	YoqE	N/A
structural_annotation	UHGV-1365620_38	PF05263,TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1365620_39	1158614.I592_01795	131.0	1.1e-35	N/A	N/A
PHROG	UHGV-1365620_41	phrog_2412	75.4	7.9e-22	N/A	unknown function
UniRef90	UHGV-1365620_41	UniRef90_A0A150NN47	72.4	0.000000000000169	N/A	N/A
eggNOG-mapper	UHGV-1365620_41	1203554.HMPREF1476_00247	70.5	0.0000000000000697	N/A	N/A
PHROG	UHGV-1365620_42	phrog_30251	607.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1365620_42	UniRef90_R7ITA5	651.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1365620_42	469618.FVAG_00794	552.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-1365620_42	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1365620_42	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1365620_42	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1365620_42	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_42	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_43	phrog_64	190.9	0	portal protein	head and packaging
UniRef90	UHGV-1365620_43	UniRef90_R6I230	915.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1365620_43	665956.HMPREF1032_03614	256.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1365620_43	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1365620_43	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-1365620_45	UniRef90_R7IWF4	386.0	0	SPP1 gp7 family phage putative head morphogenesis protein	N/A
eggNOG-mapper	UHGV-1365620_46	97138.C820_01986	69.7	0.000000000048	Phage Mu protein F like protein	N/A
COG	UHGV-1365620_46	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_48	phrog_1454	46.0	0.0000000000009	N/A	unknown function
PHROG	UHGV-1365620_49	phrog_172	69.2	8.4e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-1365620_49	UniRef90_R6HDW5	280.0	0	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-1365620_49	1499683.CCFF01000014_gene3909	61.6	0.00000000599	N/A	N/A
Pfam	UHGV-1365620_49	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1365620_49	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_50	phrog_422	220.6	0	major head protein	head and packaging
eggNOG-mapper	UHGV-1365620_50	679192.HMPREF9013_1301	241.0	0	N/A	N/A
structural_annotation	UHGV-1365620_50	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_52	PF05135,TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_53	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1365620_54	445972.ANACOL_01849	72.0	0.000000000000249	N/A	N/A
structural_annotation	UHGV-1365620_54	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1365620_55	665956.HMPREF1032_03624	52.4	0.000000832	N/A	N/A
structural_annotation	UHGV-1365620_55	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_56	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_57	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_59	phrog_11491	55.1	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-1365620_59	UniRef90_R6U6A5	204.0	0	Prophage pi3 protein 59	N/A
eggNOG-mapper	UHGV-1365620_59	1410674.JNKU01000056_gene1899	157.0	0	N/A	N/A
structural_annotation	UHGV-1365620_59	PF11355,PF13828,MF_00791,TIGR02588,COG5633	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_60	phrog_1535	182.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1365620_60	1304866.K413DRAFT_3046	119.0	3.23e-24	N/A	N/A
COG	UHGV-1365620_60	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1365620_60	PF09486,NF038178,COG1382	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_61	phrog_1194	96.5	1.9e-28	N/A	unknown function
structural_annotation	UHGV-1365620_61	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_62	phrog_6616	108.8	2.6e-33	tail protein	tail
UniRef90	UHGV-1365620_62	UniRef90_R6H354	270.0	0	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-1365620_62	1414720.CBYM010000002_gene560	105.0	1.17e-21	Phage minor structural protein	N/A
COG	UHGV-1365620_62	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1365620_62	PF05113,PF09327,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_63	phrog_1980	80.5	2.1e-23	tail fiber protein	tail
UniRef90	UHGV-1365620_63	UniRef90_R7ITT1	253.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1365620_63	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1365620_63	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1365620_63	COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1365620_64	PF03906	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_65	phrog_5717	67.6	1.3e-19	tail protein	tail
UniRef90	UHGV-1365620_65	UniRef90_A0A099I3H7	110.0	5.8e-26	Pilus assembly protein (Fragment)	N/A
eggNOG-mapper	UHGV-1365620_65	1235802.C823_05263	116.0	1.58e-27	N/A	N/A
COG	UHGV-1365620_65	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1365620_65	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1365620_66	phrog_937	43.4	0.000000000006	hemolysin	other
eggNOG-mapper	UHGV-1365620_66	1235793.C809_03303	64.3	0.00000000000937	N/A	N/A
PHROG	UHGV-1365620_67	phrog_1129	78.2	6.5e-23	holin	lysis
UniRef90	UHGV-1365620_67	UniRef90_A0A1Q6M1T2	166.0	0	Holin	N/A
eggNOG-mapper	UHGV-1365620_67	1391647.AVSV01000036_gene884	111.0	5.03e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1365620_67	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1365620_67	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1365620_69	536233.CLO_1580	63.2	0.00000000723	N/A	N/A
KOfam	UHGV-1365620_70	K01447	84.4	1.8e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1365620_70	phrog_1493	185.9	0	endolysin	lysis
UniRef90	UHGV-1365620_70	UniRef90_K1TXM5	306.0	0	N-acetylmuramoyl-L-alanine amidase (Fragment)	N/A
eggNOG-mapper	UHGV-1365620_70	1280698.AUJS01000007_gene1059	259.0	0	Ami_2	N/A
Pfam	UHGV-1365620_70	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1365620_70	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1365620_70	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1365620_70	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
KOfam	UHGV-1365620_72	K23779	62.9	7.9e-18	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
UniRef90	UHGV-1365620_72	UniRef90_R6Z152	69.7	0.0000000000000227	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1365620_72	747365.Thena_0922	52.8	0.000000175	Cupin domain	N/A
PADLOC	UHGV-1365620_72	retron_type_VI_hth_cluster2_1	44.9	0.0000000000032	N/A	Retron
Pfam	UHGV-1365620_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1365620_72	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1365620_72	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1365620	Yes	39,375	30	100	1
UHGV-0205052	No	39,375	30	100	1
UHGV-2239896	No	39,174	30	99	1
UHGV-1945939	No	39,154	30	99	1
UHGV-1940544	No	39,123	29	99	1
UHGV-0377021	No	36,428	29	93	1
UHGV-1635565	No	15,480	31	39	1
UHGV-2236175	No	14,384	29	37	1