Viral OTU vOTU-006003

vOTU: vOTU-006003

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-006003
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00214 → vSUBGEN-27116 → vOTU-006003
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1373953
Biosample ID	N/A
Length	37,447 bps
CheckV Completeness	100.00% (Complete)
CDS Count	65
CDS Density	92.38%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1373953_1	K07491	102.9	6.4e-30	rayT; REP-associated tyrosine transposase	N/A
PHROG	UHGV-1373953_1	phrog_2577	175.1	0	transposase	integration and excision
UniRef90	UHGV-1373953_1	UniRef90_A0A1Y4WHE4	315.0	0	IS200/IS605 family transposase	N/A
eggNOG-mapper	UHGV-1373953_1	572544.Ilyop_0929	267.0	0	Transposase IS200 like	N/A
Pfam	UHGV-1373953_1	PF01797	N/A	N/A	Transposase IS200 like	Y1_Tnp
NCBIFam	UHGV-1373953_1	NF033573.1	N/A	N/A	IS200/IS605 family transposase	N/A
COG	UHGV-1373953_1	COG1943	N/A	N/A	REP element-mobilizing transposase RayT	N/A
structural_annotation	UHGV-1373953_1	PF01797,MF_00360,NF033573,COG1943	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373953_2	UniRef90_A0A7M1RTM1	76.6	0.0000000000000234	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1373953_2	1378168.N510_03079	71.2	0.0000000000011	N/A	N/A
PHROG	UHGV-1373953_6	phrog_25567	43.3	0.000000000005	N/A	unknown function
UniRef90	UHGV-1373953_6	UniRef90_UPI00164AED9E	95.1	4.13e-23	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1373953_6	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1373953_6	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373953_8	760568.Desku_0885	59.3	0.0000000267	N/A	N/A
structural_annotation	UHGV-1373953_8	PF14528,PF05204,MF_01420,TIGR00647,COG3780	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373953_9	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_10	phrog_14030	141.4	6.00036e-42	N/A	unknown function
UniRef90	UHGV-1373953_10	UniRef90_R6LL81	247.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1373953_10	1121866.AUGK01000003_gene1444	92.4	9.48e-19	amidase activity	N/A
COG	UHGV-1373953_10	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1373953_11	phrog_6918	95.1	4.5e-28	holin	lysis
UniRef90	UHGV-1373953_11	UniRef90_A0A316QCY7	100.0	2e-25	Holin	N/A
eggNOG-mapper	UHGV-1373953_11	1297617.JPJD01000020_gene301	99.0	1.4e-25	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1373953_11	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1373953_11	PF09682,TIGR01673	N/A	N/A	N/A	N/A
KOfam	UHGV-1373953_15	K08131	87.8	4.4e-26	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-1373953_15	phrog_5073	64.9	9.4e-25	tail fiber protein	tail
Pfam	UHGV-1373953_15	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1373953_15	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1373953_16	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_17	phrog_26795	131.0	6.6e-39	N/A	unknown function
UniRef90	UHGV-1373953_17	UniRef90_A0A5J6T4K8	134.0	4.18e-32	Minor tail protein	N/A
eggNOG-mapper	UHGV-1373953_17	1195236.CTER_5102	134.0	2.51e-33	N/A	N/A
structural_annotation	UHGV-1373953_17	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_18	phrog_37549	79.6	1.5e-25	virion structural protein	head and packaging
UniRef90	UHGV-1373953_18	UniRef90_A0A3D0W045	227.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1373953_18	1195236.CTER_5103	130.0	1e-28	N/A	N/A
structural_annotation	UHGV-1373953_18	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_19	phrog_33680	151.4	5.60519e-45	N/A	unknown function
UniRef90	UHGV-1373953_19	UniRef90_A0A7X6UMX1	219.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1373953_19	1195236.CTER_5104	204.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1373953_19	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1373953_19	TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373953_20	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_21	phrog_88	83.8	2.2e-24	major tail protein	tail
UniRef90	UHGV-1373953_21	UniRef90_S0FUN2	115.0	3.35e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1373953_21	1195236.CTER_5106	115.0	5.62e-30	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1373953_21	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1373953_21	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373953_21	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_22	phrog_5	41.3	0.000000000032	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1373953_22	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373953_23	1487921.DP68_11350	57.4	0.00000000313	N/A	N/A
structural_annotation	UHGV-1373953_23	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_24	phrog_1951	72.6	4e-21	head-tail adaptor	connector
UniRef90	UHGV-1373953_24	UniRef90_UPI001B02B074	65.9	0.00000000000669	phage head closure protein	N/A
eggNOG-mapper	UHGV-1373953_24	1094508.Tsac_2422	53.1	0.000000117	Phage head-tail joining protein	N/A
Pfam	UHGV-1373953_24	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1373953_24	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1373953_24	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1373953_24	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_25	phrog_5223	46.0	0.00000000000071	neck protein	connector
UniRef90	UHGV-1373953_25	UniRef90_B6W9Y5	61.6	0.000000000257	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1373953_25	561177.ANHYDRO_01411	61.6	0.0000000000431	N/A	N/A
PHROG	UHGV-1373953_26	phrog_10	182.0	0	major head protein	head and packaging
UniRef90	UHGV-1373953_26	UniRef90_UPI00189AE5FE	407.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1373953_26	1280689.AUJC01000011_gene1521	392.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1373953_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1373953_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1373953_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1373953_26	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1373953_27	K01358	129.9	2.9e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1373953_27	phrog_94	196.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1373953_27	UniRef90_UPI0018979DC8	202.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1373953_27	1280689.AUJC01000011_gene1520	184.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1373953_27	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1373953_27	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1373953_27	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_28	phrog_12	180.5	0	portal protein	head and packaging
UniRef90	UHGV-1373953_28	UniRef90_C4GAS6	502.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1373953_28	626523.GCWU000342_01027	502.0	0	Portal protein	N/A
Pfam	UHGV-1373953_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1373953_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1373953_28	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_29	phrog_9	380.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1373953_29	UniRef90_A0A1Y3W5R1	785.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1373953_29	1203606.HMPREF1526_00981	736.0	0	Terminase	N/A
Pfam	UHGV-1373953_29	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1373953_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1373953_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1373953_29	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_30	phrog_1066	131.2	3.7e-39	N/A	unknown function
eggNOG-mapper	UHGV-1373953_30	1382358.JHVN01000024_gene1703	122.0	1.93e-34	N/A	N/A
structural_annotation	UHGV-1373953_30	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_31	phrog_119	48.6	0.00000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373953_31	UniRef90_A0A174XSZ8	125.0	4.14e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1373953_31	1235793.C809_01915	118.0	9.94e-33	HNH endonuclease	N/A
Pfam	UHGV-1373953_31	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1373953_31	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-1373953_32	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-1373953_32	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_33	phrog_3584	115.1	5.6e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1373953_33	537013.CLOSTMETH_02141	69.3	0.0000000000125	N/A	N/A
structural_annotation	UHGV-1373953_33	PF21578,MF_00360	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373953_34	PF08271	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373953_39	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_41	phrog_190	101.2	1e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373953_41	UniRef90_A0A845R8D4	130.0	1.14e-35	N/A	N/A
eggNOG-mapper	UHGV-1373953_41	1226322.HMPREF1545_00295	114.0	2.3e-30	N/A	N/A
Pfam	UHGV-1373953_41	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1373953_41	PF06356	N/A	N/A	N/A	N/A
Pfam	UHGV-1373953_43	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1373953_43	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1373953_43	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_44	phrog_4019	69.5	2.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-1373953_44	665956.HMPREF1032_03087	72.8	0.000000000000226	N/A	N/A
PHROG	UHGV-1373953_45	phrog_3136	76.4	2.4e-32	N/A	unknown function
UniRef90	UHGV-1373953_45	UniRef90_A0A3D0HBD2	99.0	8.34e-24	ASCH domain-containing protein	N/A
Pfam	UHGV-1373953_45	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1373953_45	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1373953_45	PF12961,NF002008,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373953_47	UniRef90_UPI000CECCE2D	52.8	0.00000372	N/A	N/A
Pfam	UHGV-1373953_47	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1373953_47	NF041588	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373953_49	1235792.C808_01244	142.0	2.84e-39	N/A	N/A
structural_annotation	UHGV-1373953_52	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1373953_55	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-1373953_60	K22300	54.7	0.0000000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1373953_60	phrog_4	50.0	0.000000000000075	transcriptional repressor	transcription regulation
UniRef90	UHGV-1373953_60	UniRef90_A0A2U1BEG8	119.0	1.9e-32	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1373953_60	1235797.C816_03553	107.0	7.27e-28	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-1373953_60	retron_type_VI_hth_cluster2_1	42.3	0.000000000015	N/A	Retron
Pfam	UHGV-1373953_60	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1373953_60	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1373953_60	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1373953_62	622312.ROSEINA2194_02761	58.9	0.0000000674	NOG18738 non supervised orthologous group	N/A
COG	UHGV-1373953_62	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-1373953_62	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-1373953_63	phrog_10292	74.2	1.1e-21	N/A	unknown function
UniRef90	UHGV-1373953_63	UniRef90_A0A416W984	95.9	9.04e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1373953_63	537013.CLOSTMETH_02269	80.5	3.89e-17	TM2 domain	N/A
Pfam	UHGV-1373953_63	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1373953_63	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1373953_63	COG2314	N/A	N/A	N/A	N/A
Pfam	UHGV-1373953_64	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1373953_64	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1373953_64	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1373953_65	K06400	378.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1373953_65	phrog_95	366.0	0	integrase	integration and excision
UniRef90	UHGV-1373953_65	UniRef90_UPI00189960B8	503.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1373953_65	1235835.C814_00825	410.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1373953_65	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1373953_65	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1373953_65	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1373953_65	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1373953_65	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1373953	Yes	37,447	57	100	1
UHGV-0134324	No	37,447	57	100	1
UHGV-0192636	No	26,961	58	73	1