Viral OTU vOTU-006502

vOTU: vOTU-006502

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-006502
Number of Genomes	5
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00751 → vGENUS-00991 → vSUBGEN-14104 → vOTU-006502
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Limivicinus
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0033921
Biosample ID	SAMEA4766357
Length	39,157 bps
CheckV Completeness	100.00% (Complete)
CDS Count	54
CDS Density	92.92%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0033921_1	phrog_22978	80.9	2.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0033921_1	1226322.HMPREF1545_00787	184.0	1.13505e-43	N/A	N/A
Pfam	UHGV-0033921_1	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0033921_1	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
eggNOG-mapper	UHGV-0033921_2	1410650.JHWL01000003_gene2815	128.0	1.55e-30	N/A	N/A
KOfam	UHGV-0033921_3	K07584	56.5	6e-16	N/A	N/A
PHROG	UHGV-0033921_3	phrog_4478	51.5	0.000000000000014	peptidase	other
UniRef90	UHGV-0033921_3	UniRef90_A0A853JS18	54.3	0.000000242	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0033921_3	1114972.AUAW01000001_gene1462	48.5	0.00000794	Cysteine protease Prp	N/A
Pfam	UHGV-0033921_3	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0033921_3	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033921_3	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_4	phrog_156	273.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0033921_4	1410650.JHWL01000003_gene2833	493.0	0	N/A	N/A
structural_annotation	UHGV-0033921_4	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0033921_5	K06909	142.1	4.69996e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0033921_5	phrog_979	141.9	1.4013e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0033921_5	UniRef90_A0A3C0NMI6	692.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0033921_5	1410650.JHWL01000003_gene2834	588.0	0	N/A	N/A
Pfam	UHGV-0033921_5	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0033921_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0033921_5	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033921_6	UniRef90_A0A3C0NNN3	63.9	0.00000000149	HTH psq-type domain-containing protein	N/A
PHROG	UHGV-0033921_9	phrog_3584	163.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0033921_9	1226322.HMPREF1545_03841	249.0	0	N/A	N/A
structural_annotation	UHGV-0033921_9	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_14	phrog_924	41.5	0.0000000000053	N/A	unknown function
UniRef90	UHGV-0033921_14	UniRef90_A0A417H740	168.0	0	N/A	N/A
Pfam	UHGV-0033921_14	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0033921_14	NF041588	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033921_16	749222.Nitsa_1823	84.3	6.27e-16	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0033921_16	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0033921_17	phrog_24518	54.5	0.0000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0033921_17	693746.OBV_25370	94.4	2.24e-21	N/A	N/A
PHROG	UHGV-0033921_18	phrog_824	154.0	0	N/A	unknown function
UniRef90	UHGV-0033921_18	UniRef90_A0A6N8GXS9	178.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0033921_18	665956.HMPREF1032_00132	161.0	0	VRR_NUC	N/A
Pfam	UHGV-0033921_18	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
UniRef90	UHGV-0033921_28	UniRef90_A0A2N2CNE6	75.1	0.00000000000000194	N/A	N/A
eggNOG-mapper	UHGV-0033921_28	742738.HMPREF9460_02806	80.1	1.04e-16	N/A	N/A
KOfam	UHGV-0033921_32	K18830	60.1	5.5e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0033921_32	phrog_8	43.7	0.000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033921_32	UniRef90_E2ZIF0	121.0	1.64e-32	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0033921_32	748224.HMPREF9436_01444	121.0	2.75e-33	N/A	N/A
PADLOC	UHGV-0033921_32	retron_type_VI_hth_cluster2_1	43.5	0.0000000000071	N/A	Retron
Pfam	UHGV-0033921_32	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0033921_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0033921_32	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0033921_34	K14059	127.7	1.5e-37	int; integrase	N/A
PHROG	UHGV-0033921_34	phrog_1	135.4	4.5e-40	integrase	integration and excision
UniRef90	UHGV-0033921_34	UniRef90_A0A2Z4QB94	276.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0033921_34	1514668.JOOA01000001_gene242	147.0	2.49e-38	Phage integrase family	N/A
Pfam	UHGV-0033921_34	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0033921_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033921_34	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0033921_34	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033921_35	1408437.JNJN01000043_gene801	69.3	0.000000000003	N/A	N/A
structural_annotation	UHGV-0033921_38	PF16509,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_39	phrog_199	65.7	5.3e-19	holin	lysis
UniRef90	UHGV-0033921_39	UniRef90_A0A3C0NPD5	184.0	0	Holin	N/A
eggNOG-mapper	UHGV-0033921_39	742738.HMPREF9460_01388	151.0	1.4013e-44	Bacteriophage holin family	N/A
Pfam	UHGV-0033921_39	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0033921_39	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0033921_39	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0033921_39	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_40	phrog_14030	161.6	0	N/A	unknown function
UniRef90	UHGV-0033921_40	UniRef90_A0A316NTC6	216.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033921_40	641107.CDLVIII_3774	194.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-0033921_40	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0033921_40	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0033921_40	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0033921_40	PF01471,PF05382,NF038080,NF033742,COG3409,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_41	phrog_918	107.8	4.2e-32	N/A	unknown function
UniRef90	UHGV-0033921_41	UniRef90_UPI0013775FB5	115.0	6.21e-32	N/A	N/A
eggNOG-mapper	UHGV-0033921_41	1504823.CCMM01000008_gene1021	105.0	7.32e-29	N/A	N/A
Pfam	UHGV-0033921_41	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0033921_41	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_43	phrog_27545	86.5	3.1e-25	N/A	unknown function
UniRef90	UHGV-0033921_43	UniRef90_R6ELD6	70.9	0.000000000000786	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-0033921_43	1122971.BAME01000151_gene6566	101.0	1.32e-24	N/A	N/A
structural_annotation	UHGV-0033921_46	PF21253,PF07210,NF038128,TIGR03000,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_47	phrog_25979	51.2	0.0000000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0033921_47	1408422.JHYF01000026_gene3527	94.4	3.22e-20	nuclear chromosome segregation	N/A
COG	UHGV-0033921_47	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0033921_47	PF07353,COG3979	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_49	phrog_511	232.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0033921_49	1410650.JHWL01000003_gene2827	348.0	0	N/A	N/A
structural_annotation	UHGV-0033921_49	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_50	phrog_12105	99.4	2.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0033921_50	1519439.JPJG01000060_gene1891	68.6	0.000000000000405	N/A	N/A
PHROG	UHGV-0033921_52	phrog_1357	220.6	0	major head protein	head and packaging
UniRef90	UHGV-0033921_52	UniRef90_A0A3C0NPN1	560.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0033921_52	1410650.JHWL01000003_gene2830	261.0	0	N/A	N/A
NCBIFam	UHGV-0033921_52	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0033921_52	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_53	phrog_13908	177.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0033921_53	748224.HMPREF9436_01398	58.9	0.000000867	Cysteine protease Prp	N/A
COG	UHGV-0033921_53	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0033921_54	phrog_22978	595.8	0	N/A	unknown function
UniRef90	UHGV-0033921_54	UniRef90_A0A396KH15	446.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033921_54	1410650.JHWL01000003_gene2814	370.0	0	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0033921	Yes	39,157	56	100	1
UHGV-0013241	No	39,104	56	100	1
UHGV-0011693	No	40,227	56	100	1
UHGV-0025621	No	39,037	56	100	1
UHGV-0016055	No	34,805	56	91	1