Viral OTU vOTU-006990

vOTU: vOTU-006990

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-006990
Number of Genomes	5
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00291 → vSUBFAM-01665 → vGENUS-03800 → vSUBGEN-02084 → vOTU-006990
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter → Intestinibacter bartlettii
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0011320
Biosample ID	SAMEA4765574
Length	49,386 bps
CheckV Completeness	100.00% (Complete)
CDS Count	54
CDS Density	91.40%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0011320_1	phrog_435	51.5	0.000000000000021	endolysin	lysis
eggNOG-mapper	UHGV-0011320_1	1297617.JPJD01000049_gene1326	80.9	4.93e-16	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0011320_1	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0011320_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-0011320_2	phrog_7882	48.1	0.00000000000018	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0011320_2	762051.LKI_00410	53.9	0.00000103	Replication initiator protein A (RepA) N-terminus	N/A
Pfam	UHGV-0011320_2	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
PHROG	UHGV-0011320_4	phrog_1934	111.5	5.1e-33	N/A	unknown function
UniRef90	UHGV-0011320_4	UniRef90_UPI000DE2F68D	130.0	4.36e-35	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-0011320_4	1120951.AUBG01000007_gene19	115.0	3.26e-31	zinc-finger-containing domain	N/A
Pfam	UHGV-0011320_4	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-0011320_4	PF11672	N/A	N/A	N/A	N/A
KOfam	UHGV-0011320_5	K01160	73.1	6.4e-21	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0011320_5	phrog_34	59.0	8.1e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_5	UniRef90_C9KJA0	79.7	2.24e-16	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0011320_5	401526.TcarDRAFT_1308	77.0	4.1e-16	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0011320_5	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0011320_5	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
PHROG	UHGV-0011320_6	phrog_774	64.6	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0011320_6	397290.C810_05225	70.5	0.0000000000000106	N/A	N/A
PHROG	UHGV-0011320_7	phrog_173	108.6	5.4e-32	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_7	UniRef90_A0A846TX09	82.8	1.17e-16	dUTPase	N/A
eggNOG-mapper	UHGV-0011320_7	1427984.X271_00119	70.9	0.000000000000654	protein conserved in bacteria	N/A
Pfam	UHGV-0011320_7	PF08761	N/A	N/A	dUTPase	dUTPase_2
COG	UHGV-0011320_7	COG4508	N/A	N/A	Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily	N/A
structural_annotation	UHGV-0011320_7	PF08761,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-0011320_8	phrog_918	120.9	3.5e-36	N/A	unknown function
UniRef90	UHGV-0011320_8	UniRef90_UPI0005DA7338	144.0	3.9937e-43	N/A	N/A
eggNOG-mapper	UHGV-0011320_8	1499683.CCFF01000014_gene3910	144.0	6.44597e-44	N/A	N/A
Pfam	UHGV-0011320_8	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0011320_8	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0011320_10	K07465	56.6	2.5e-16	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-0011320_10	phrog_69	61.3	1.6e-17	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_10	UniRef90_UPI0010488E2D	172.0	0	PD-(D/E)XK nuclease family protein	N/A
Pfam	UHGV-0011320_10	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
KOfam	UHGV-0011320_12	K02337	946.2	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-0011320_12	phrog_405	755.8	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_12	UniRef90_A0A2W4K2C4	556.0	0	DNA polymerase III subunit alpha	N/A
eggNOG-mapper	UHGV-0011320_12	632335.Calkr_1243	545.0	0	TIGRFAM DNA polymerase III, alpha subunit	N/A
Pfam	UHGV-0011320_12	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-0011320_12	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-0011320_12	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-0011320_12	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
NCBIFam	UHGV-0011320_12	TIGR00594.1	N/A	N/A	DNA polymerase III subunit alpha	N/A
COG	UHGV-0011320_12	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-0011320_12	PF07733,PF02811,PF17657,PF14579,MF_01902,TIGR00594,COG0587	N/A	N/A	N/A	N/A
PHROG	UHGV-0011320_15	phrog_4897	114.6	1.1e-33	kinase	other
UniRef90	UHGV-0011320_15	UniRef90_A0A418MBD6	98.2	1.42e-24	N/A	N/A
eggNOG-mapper	UHGV-0011320_15	500635.MITSMUL_03175	93.2	1e-21	N/A	N/A
Pfam	UHGV-0011320_15	PF11753	N/A	N/A	N/A	DUF3310
KOfam	UHGV-0011320_16	K02316	161.0	0	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0011320_16	phrog_47	174.3	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_16	UniRef90_UPI0010539013	270.0	0	toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-0011320_16	521045.Kole_0342	112.0	1.51e-24	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
Pfam	UHGV-0011320_16	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-0011320_16	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-0011320_16	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0011320_16	PF01807,PF13155,PF08275,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
KOfam	UHGV-0011320_18	K02314	192.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0011320_18	phrog_19	208.9	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_18	UniRef90_UPI000EBD570D	420.0	0	replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0011320_18	1273742.M1HNB2_9CAUD	248.0	0	DNA helicase activity	N/A
Pfam	UHGV-0011320_18	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0011320_18	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
structural_annotation	UHGV-0011320_18	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
Pfam	UHGV-0011320_21	PF06094	N/A	N/A	Gamma-glutamyl cyclotransferase, AIG2-like	GGACT
KOfam	UHGV-0011320_22	K03465	262.1	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0011320_22	phrog_85	163.7	0	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_22	UniRef90_A0A8J7VFK3	275.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0011320_22	1123009.AUID01000023_gene1459	270.0	0	Thymidylate synthase complementing protein	N/A
Pfam	UHGV-0011320_22	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0011320_22	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-0011320_22	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
HAMAP	UHGV-0011320_22	MF_01408	N/A	N/A	Flavin-dependent thymidylate synthase [thyX]	N/A
structural_annotation	UHGV-0011320_22	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
Pfam	UHGV-0011320_24	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
KOfam	UHGV-0011320_25	K21029	85.3	6.5e-25	moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]	N/A
PHROG	UHGV-0011320_25	phrog_15670	68.2	1.2e-19	N/A	unknown function
UniRef90	UHGV-0011320_25	UniRef90_UPI0010518C12	179.0	0	ThiF family adenylyltransferase	N/A
Pfam	UHGV-0011320_25	PF00899	N/A	N/A	ThiF family	ThiF
COG	UHGV-0011320_25	COG0476	N/A	N/A	Molybdopterin or thiamine biosynthesis adenylyltransferase	N/A
structural_annotation	UHGV-0011320_25	PF00899,MF_03049,NF004281,COG0476	N/A	N/A	N/A	N/A
KOfam	UHGV-0011320_31	K03111	116.8	2.8e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0011320_31	phrog_44	121.2	8.7e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011320_31	UniRef90_A0A6N3G1G0	149.0	7.28675e-44	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0011320_31	445973.CLOBAR_00026	149.0	1.26117e-44	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0011320_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0011320_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0011320_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0011320_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0011320_31	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0011320_37	phrog_2538	54.3	0.000000000000002	terminase small subunit	head and packaging
UniRef90	UHGV-0011320_37	UniRef90_UPI0010482774	130.0	1.01e-35	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0011320_37	279808.SH2359	50.4	0.00000599	N/A	N/A
Pfam	UHGV-0011320_37	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
KOfam	UHGV-0011320_38	K21523	53.3	6.9e-28	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0011320_38	phrog_2	117.5	1.7e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0011320_38	UniRef90_UPI000E6C46F7	694.0	0	DNA packaging protein	N/A
eggNOG-mapper	UHGV-0011320_38	935837.JAEK01000054_gene1465	511.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-0011320_38	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0011320_38	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0011320_39	phrog_156	209.0	0	portal protein	head and packaging
UniRef90	UHGV-0011320_39	UniRef90_A0A6M3K0N4	142.0	4.01e-32	Putative head tail connector protein	N/A
eggNOG-mapper	UHGV-0011320_39	1283071.R9R4C3_9CAUD	65.9	0.0000000341	host cell wall	N/A
structural_annotation	UHGV-0011320_39	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0011320_41	phrog_371	132.2	4e-39	major head protein	head and packaging
UniRef90	UHGV-0011320_41	UniRef90_UPI000E6BE03E	388.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-0011320_41	665950.HMPREF1025_01576	65.5	0.00000000365	COGs COG4397 Mu-like prophage major head subunit gpT	N/A
Pfam	UHGV-0011320_41	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
COG	UHGV-0011320_41	COG4397	N/A	N/A	Mu-like prophage major head subunit gpT	N/A
structural_annotation	UHGV-0011320_41	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0011320_44	935837.JAEK01000054_gene1472	63.9	0.000000122	N/A	N/A
structural_annotation	UHGV-0011320_44	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0011320_47	phrog_19111	41.1	0.0000000000072	N/A	unknown function
KOfam	UHGV-0011320_48	K16559	49.1	0.000000000000023	exoK; endo-1,3-1,4-beta-glycanase ExoK [EC:3.2.1.-]	N/A
PHROG	UHGV-0011320_48	phrog_215	59.2	1.7e-25	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-0011320_48	86416.Clopa_0354	197.0	0	family 16	N/A
Pfam	UHGV-0011320_48	PF00722	N/A	N/A	Glycosyl hydrolases family 16	Glyco_hydro_16
Pfam	UHGV-0011320_48	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0011320_48	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0011320_48	PF03935,PF02368,MF_04116,NF041449,COG2273,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0011320_49	phrog_9648	46.6	0.00000000000035	tail protein	tail
UniRef90	UHGV-0011320_49	UniRef90_A0A383C4B6	58.9	0.0000003	Mtd_N domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0011320_49	194699.FIBD_BPBPP	68.2	0.0000000000766	N/A	N/A
Pfam	UHGV-0011320_49	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
structural_annotation	UHGV-0011320_50	PF06848,NF033679	N/A	N/A	N/A	N/A
Pfam	UHGV-0011320_53	PF10960	N/A	N/A	BhlA holin family	Holin_BhlA
PHROG	UHGV-0011320_54	phrog_435	55.8	9.5e-16	endolysin	lysis
eggNOG-mapper	UHGV-0011320_54	1118057.CAGX01000020_gene1590	60.1	0.00000000469	mannosyl-glycoprotein	N/A
Pfam	UHGV-0011320_54	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0011320_54	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0011320	Yes	49,386	31	100	1
UHGV-0009684	No	49,386	31	100	1
UHGV-0008088	No	46,257	31	95	1
UHGV-0013283	No	37,868	31	78	1
UHGV-0041336	No	32,443	31	66	1