Viral OTU vOTU-008936

vOTU: vOTU-008936

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-008936
Number of Genomes	6
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00015 → vSUBFAM-00065 → vGENUS-00690 → vSUBGEN-00334 → vOTU-008936
Host Lineage	Bacteria → Actinobacteriota → Actinomycetia → Actinomycetales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium longum
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0181278
Biosample ID	SAMEA2580054
Length	18,382 bps
CheckV Completeness	100.00% (Complete)
CDS Count	25
CDS Density	94.98%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0181278_5	PF17548,MF_00273	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_6	phrog_6243	56.6	4.3e-16	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0181278_6	513550.B6RT34_9VIRU	53.1	0.00000156	Pfam:Phi29_Phage_SSB	N/A
Pfam	UHGV-0181278_6	PF17427	N/A	N/A	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
structural_annotation	UHGV-0181278_6	PF17427	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181278_7	UniRef90_A0A1L5L4S0	175.0	0	Nodulation protein S (NodS) (Fragment)	N/A
KOfam	UHGV-0181278_8	K21237	235.7	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0181278_8	phrog_1907	195.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181278_8	UniRef90_A0A1L5L4Q6	565.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0181278_8	10753.DPOL_BPNF	160.0	2.75001e-40	nucleotide binding	N/A
Pfam	UHGV-0181278_8	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-0181278_8	PF03175,MF_04055,NF004417,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_10	phrog_2006	198.5	0	major head protein	head and packaging
UniRef90	UHGV-0181278_10	UniRef90_A0A6G5YM92	389.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181278_10	1161906.I6P8H2_9CAUD	80.5	0.000000000000276	T=13 icosahedral viral capsid	N/A
Pfam	UHGV-0181278_10	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
structural_annotation	UHGV-0181278_10	PF02368,PF19821,PF18957,MF_04119,NF033394,COG1659,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_11	phrog_2248	198.2	0	tail protein	tail
UniRef90	UHGV-0181278_11	UniRef90_A0A6G5XZQ5	510.0	0	Caud_tail_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0181278_11	338473.A6XAD6_9CAUD	307.0	0	N/A	N/A
Pfam	UHGV-0181278_11	PF16838	N/A	N/A	Caudoviral major tail protein N-terminus	Caud_tail_N
Pfam	UHGV-0181278_11	PF20934	N/A	N/A	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
structural_annotation	UHGV-0181278_11	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_12	phrog_2038	181.7	0	upper collar connector	connector
UniRef90	UHGV-0181278_12	UniRef90_A0A7S5V0G4	151.0	8.89001e-40	Upper collar connector protein	N/A
eggNOG-mapper	UHGV-0181278_12	10753.B7SSN1_BPNF	147.0	1.78e-39	Phage Connector (GP10)	N/A
Pfam	UHGV-0181278_12	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-0181278_12	PF05352,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_13	phrog_3225	115.6	5.1e-34	adaptor Ad4	connector
UniRef90	UHGV-0181278_13	UniRef90_A0A7S5RIY2	76.6	0.000000000000383	Lower collar connector protein	N/A
eggNOG-mapper	UHGV-0181278_13	338473.A6XAD8_9CAUD	80.9	0.0000000000000024	N/A	N/A
KOfam	UHGV-0181278_16	K10804	49.4	0.000000000000067	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
UniRef90	UHGV-0181278_16	UniRef90_UPI0010FE784F	237.0	0	SGNH/GDSL hydrolase family protein	N/A
Pfam	UHGV-0181278_16	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
structural_annotation	UHGV-0181278_16	PF14606,NF007819,COG2240	N/A	N/A	N/A	N/A
Pfam	UHGV-0181278_17	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0181278_17	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0181278_17	TIGR02219	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_18	phrog_2150	222.4	0	terminase	head and packaging
UniRef90	UHGV-0181278_18	UniRef90_UPI0010FDCA94	429.0	0	phage DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-0181278_18	338473.A6XAE1_9CAUD	211.0	0	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-0181278_18	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-0181278_18	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_19	phrog_199	45.6	0.00000000000076	holin	lysis
UniRef90	UHGV-0181278_19	UniRef90_A0A229VZS5	107.0	8.48e-28	Holin	N/A
eggNOG-mapper	UHGV-0181278_19	1437610.BREU_1264	93.6	4.93e-23	Bacteriophage holin family	N/A
Pfam	UHGV-0181278_19	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0181278_19	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0181278_19	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0181278_20	phrog_19265	61.9	8.6e-18	N/A	unknown function
UniRef90	UHGV-0181278_20	UniRef90_A0A2M9HTA7	222.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181278_20	1437610.BREU_1266	119.0	4.37e-30	peptidoglycan receptor activity	N/A
Pfam	UHGV-0181278_20	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0181278_20	COG5479	N/A	N/A	LGFP repeat-containing protein, may be involved in cell wall binding	N/A
structural_annotation	UHGV-0181278_20	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181278_25	PF02312	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0181278	Yes	18,382	50	100	1
UHGV-1989791	No	18,673	50	100	1
UHGV-1477255	No	18,505	51	100	1
UHGV-1401290	No	17,120	51	95	1
UHGV-0075584	No	17,076	51	95	1
UHGV-1400082	No	17,076	51	95	1