Viral OTU vOTU-009670

vOTU: vOTU-009670

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-009670
Number of Genomes	6
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00615 → vGENUS-00457 → vOTU-009670
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-2008979
Biosample ID	N/A
Length	33,638 bps
CheckV Completeness	88.90% (Medium-quality)
CDS Count	37
CDS Density	93.39%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-2008979_2	PF10651,PF01664,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-2008979_3	K20478	152.8	0	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-2008979_3	phrog_22978	103.0	7.1e-34	N/A	unknown function
eggNOG-mapper	UHGV-2008979_3	748224.HMPREF9436_01406	242.0	0	N/A	N/A
eggNOG-mapper	UHGV-2008979_4	1410650.JHWL01000003_gene2815	92.8	1.25e-17	N/A	N/A
eggNOG-mapper	UHGV-2008979_6	411460.RUMTOR_00484	79.7	0.00000000000241	Prophage endopeptidase tail	N/A
COG	UHGV-2008979_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2008979_6	PF07902	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_7	phrog_511	243.7	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-2008979_7	1410650.JHWL01000003_gene2827	357.0	0	N/A	N/A
structural_annotation	UHGV-2008979_7	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_8	phrog_12105	112.7	2.2e-33	N/A	unknown function
PHROG	UHGV-2008979_10	phrog_1357	202.9	0	major head protein	head and packaging
UniRef90	UHGV-2008979_10	UniRef90_A0A6L5YGG5	402.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-2008979_10	1410650.JHWL01000003_gene2830	304.0	0	N/A	N/A
Pfam	UHGV-2008979_10	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-2008979_10	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-2008979_10	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_11	phrog_13908	176.4	0	N/A	unknown function
eggNOG-mapper	UHGV-2008979_11	1410650.JHWL01000003_gene2831	105.0	1.91e-23	N/A	N/A
KOfam	UHGV-2008979_12	K07584	66.8	4.1e-19	N/A	N/A
PHROG	UHGV-2008979_12	phrog_4478	56.7	1.6e-16	peptidase	other
UniRef90	UHGV-2008979_12	UniRef90_A0A841YBI3	64.7	0.0000000000273	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-2008979_12	562982.HMPREF0432_00498	63.5	0.0000000000143	Cysteine protease Prp	N/A
Pfam	UHGV-2008979_12	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-2008979_12	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2008979_12	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_13	phrog_156	286.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-2008979_13	1410650.JHWL01000003_gene2833	464.0	0	N/A	N/A
structural_annotation	UHGV-2008979_13	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-2008979_14	K06909	151.6	7.00649e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2008979_14	phrog_979	130.2	7.29999e-40	terminase large subunit	head and packaging
UniRef90	UHGV-2008979_14	UniRef90_A0A810Q5R0	560.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2008979_14	1410650.JHWL01000003_gene2834	558.0	0	N/A	N/A
Pfam	UHGV-2008979_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-2008979_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2008979_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_16	phrog_15863	151.0	4.2039e-45	N/A	unknown function
UniRef90	UHGV-2008979_16	UniRef90_A0A415YCN0	192.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-2008979_16	888064.HMPREF9088_2252	148.0	3.97969e-43	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-2008979_16	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
eggNOG-mapper	UHGV-2008979_17	97139.C824_00161	53.9	0.0000000365	N/A	N/A
UniRef90	UHGV-2008979_18	UniRef90_A0A412ULX9	75.1	1.07e-16	XRE family transcriptional regulator	N/A
Pfam	UHGV-2008979_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2008979_18	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-2008979_18	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-2008979_19	K00571	155.1	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2008979_19	phrog_67	135.0	1.70006e-41	DNA methyltransferase	other
UniRef90	UHGV-2008979_19	UniRef90_A0A374DDR5	400.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-2008979_19	877240.E1AC06_9CAUD	228.0	0	helicase activity	N/A
PADLOC	UHGV-2008979_19	MTase_II_00157	156.1	0	Type II methyltransferase	RM
Pfam	UHGV-2008979_19	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-2008979_19	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-2008979_20	K07273	200.4	0	acm; lysozyme	N/A
PHROG	UHGV-2008979_20	phrog_291	168.9	0	endolysin	lysis
UniRef90	UHGV-2008979_20	UniRef90_A0A373KPS8	518.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-2008979_20	1410670.JHXF01000007_gene609	171.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-2008979_20	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-2008979_20	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2008979_20	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2008979_20	PF01183,PF01471,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_21	phrog_918	118.8	1.5e-35	N/A	unknown function
UniRef90	UHGV-2008979_21	UniRef90_UPI00164AB9AF	124.0	1.54e-35	N/A	N/A
eggNOG-mapper	UHGV-2008979_21	1504823.CCMM01000008_gene1021	116.0	6.35e-33	N/A	N/A
Pfam	UHGV-2008979_21	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-2008979_21	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_22	phrog_443	64.6	2.4e-18	holin	lysis
UniRef90	UHGV-2008979_22	UniRef90_R6R2Q3	88.6	9.06e-22	Conserved domain protein	N/A
eggNOG-mapper	UHGV-2008979_22	1235797.C816_04172	82.0	6.09e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-2008979_22	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-2008979_22	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_23	phrog_1863	65.9	5.2e-20	N/A	unknown function
UniRef90	UHGV-2008979_23	UniRef90_UPI001F223E8B	75.5	3.56e-16	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-2008979_23	428125.CLOLEP_01781	73.2	4.07e-16	N/A	N/A
KOfam	UHGV-2008979_24	K01520	139.8	2.09999e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-2008979_24	phrog_135	136.0	1.8e-40	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2008979_24	UniRef90_UPI00164A78A3	162.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-2008979_24	1282887.AUJG01000016_gene1113	148.0	6.61413e-43	N/A	N/A
Pfam	UHGV-2008979_24	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-2008979_24	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-2008979_24	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-2008979_24	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_25	phrog_2118	120.2	1.8e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2008979_25	UniRef90_A0A373KMT6	207.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2008979_25	610130.Closa_0730	169.0	0	HNH endonuclease	N/A
Pfam	UHGV-2008979_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-2008979_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-2008979_25	COG1403	N/A	N/A	N/A	N/A
Pfam	UHGV-2008979_26	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-2008979_27	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-2008979_27	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-2008979_27	PF14354,TIGR03655	N/A	N/A	N/A	N/A
KOfam	UHGV-2008979_29	K22300	53.0	0.0000000000000079	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2008979_29	phrog_8	57.8	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2008979_29	UniRef90_A0A374N9T4	101.0	5.79e-27	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2008979_29	717605.Theco_0106	77.4	2.58e-17	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2008979_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2008979_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2008979_29	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_32	phrog_301	76.0	5e-22	secreted protein	other
UniRef90	UHGV-2008979_32	UniRef90_UPI00112B19FF	94.4	1.28e-22	N/A	N/A
eggNOG-mapper	UHGV-2008979_32	397290.C810_05192	100.0	1.17e-25	N/A	N/A
structural_annotation	UHGV-2008979_32	PF07509,MF_00720,NF038397,COG3390	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2008979_34	PF05129	N/A	N/A	N/A	N/A
PHROG	UHGV-2008979_37	phrog_27197	45.2	0.0000000000019	N/A	unknown function
COG	UHGV-2008979_37	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2008979	Yes	33,638	40	89	1
UHGV-0353066	No	43,545	39	100	1
UHGV-1383877	No	41,078	39	100	1
UHGV-2191084	No	41,055	39	100	1
UHGV-0068244	No	40,993	39	100	1
UHGV-0188075	No	32,795	40	87	1